Hi,
I generated a plant genome de novo assembly with a decent N50 value and Busco completion score using the Masurca tool. Then, I performed structural annotation, such as gene prediction, using Braker2.
After the Braker2 run, I got the coding sequences and the .gff file. Now, I want to assign gene descriptions for these CDs/genes in the .gff file.
Which tool or methodology can I use for that? I tried to do a blast alignment of the coding sequences against the NR databases have been running endlessly and seem very time-consuming.
Is there any tool available similar to Trinotate for transcriptomes? Any suggestions or ideas regarding this is highly appreciated. Hope someone will help me out with this.
Thank you