Entering edit mode
21 days ago
Assa Yeroslaviz
★
1.9k
I was wondering if it is possible to color specific genes in a VariableFeaturePlot
from the Seurat
package.
I have a vector of names i use to label them, but I would like to also add a different color to a second vector of genes.
This how I label them for now:
plot1 <- VariableFeaturePlot(C7_G7) +
scale_color_manual(values = c("purple", "lightblue", "red"))
genes <- c("Gzma", "Ighg1", head(VariableFeatures(C7_G7), 10))
plot2 <- LabelPoints(plot = plot1, points = genes, repel = TRUE,
max.overlaps = Inf, xnudge = 0, ynudge = 0)
But how can I color specific points in the plot?
thanks