Entering edit mode
3 days ago
analyst
▴
50
Dear all, I got following error while running predector command.
Plus 4 more processes waiting for tasks… [06/6a863f] NOTE: Process
signalp_v6 (2)
terminated with an error exit status (137) -- Execution is retried (1)
How to avoid this or should i ignore it?
Also predector command is taking days to for 145 fungus proteomes (proteome size range from 7-9mb ). What can be the estimated completion time? Note that server contains 96 cores, 440.5 GiB memory, 10tb space
Status 137 related to memory. Looks like 440GB is not enough for what ever you are running.
I am running predector (effector prediction pipeline based on protein properties) using nextflow command given in the usage.
Please find link to tool here
Thank you!
Running command again I got above message on bash terminal
Looks like you need to do some cleanup when you are restarting the pipeline.