Deleted:Questions about default parameter settings in GeneiASE
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12 days ago
Juliana • 0

Hi everyone!

We are working on ASE with some of our RNA-Seq data, and I was wondering if you could help us with a few questions:

  1. What is the minimum number of variants that GeneiASE requires within each transcript, in order to analyze said transcript?
  2. What is minimum shift from the expected 50% allelic expression that GeneiASE employs when calling transcript imbalance?

Thank you for any help on this!

GeneiASE RNA-Seq allele-specific-expression ASE • 178 views
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