help with finding start&and locations of gene list

Question

[Naor]

Hi, I have list of genes' names and I would like to get their start&end locations from NCBI for example or any other relaibale website. for example: for gene X start location is 1 and end location is 15

how can I do this?

thanks!

Answer 1

[Pierre Lindenbaum]

use ensembl biomart https://www.ensembl.org/biomart/martview

Answer 2

[GenoMax]

Using NCBI datasets/dataformat command line utilities (LINK):

$ datasets summary gene symbol tp53 --as-json-lines | dataformat tsv gene  --fields symbol,gene-id,annotation-assembly-name,chromosomes,annotation-genomic-range-range-start,annotation-genomic-range-range-stop
Symbol  NCBI GeneID     Annotation Assembly Name        Chromosomes     Annotation Genomic Range Start  Annotation Genomic Range Stop
TP53    7157    GRCh38.p14      17      7668421 7687490
TP53    7157    T2T-CHM13v2.0   17      7572544 7591594