Entering edit mode
4 weeks ago
heureuse
•
0
Hello, I'm building a pipeline For CNV calling and I would like to validate using this trios NA12878, NA12891 and NA12892. I don't know where I can find the BAM files and the golden CNV. I have this link https://github.com/genome-in-a-bottle/giab_data_indexes but only NA12878 BAM is available.
Thank you.
yes I saw them there as well but I don't know how to download the BAM. Thanks
You will need to download the fastq data and align it yourself, if BAM's are not available. You should probably do that for all three to be consistent.