Question: Create Instances From Position Frequency Matrix
gravatar for b.schaefke
6.3 years ago by
b.schaefke10 wrote:

How can I create instances from a position frequency matrix (in a transfac format motif) using the biopython motifs (not the old Motif) package and search for their occurence in a given sequence?

search biopython • 1.8k views
ADD COMMENTlink modified 6.3 years ago • written 6.3 years ago by b.schaefke10

Why would you want to search for a random instance of the motif instead of the whole motif? Using the motif to search is more sensitive than an instance.

ADD REPLYlink written 6.3 years ago by Pablacious620
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