Question: blast -F F equivalent in blast+
2
gravatar for Alper Yilmaz
6.9 years ago by
Alper Yilmaz90
Turkey
Alper Yilmaz90 wrote:

In legacy blast there is an option -F, which turns on or off filtering. By default filtering is ON and it effects my results a lot, so I turn it off by -F F (false)

In blast+ I couldn't figure out the equivalent of -F F. In Equivalent Blast And Blast+ Commands  it was suggested to use "-dust yes", I tried it and it does not work, there's still filtering going on.

So, what is the option in blast+ to turn off filtering?

 

blast+ blast ncbi • 1.4k views
ADD COMMENTlink modified 6.9 years ago • written 6.9 years ago by Alper Yilmaz90
2
gravatar for Alper Yilmaz
6.9 years ago by
Alper Yilmaz90
Turkey
Alper Yilmaz90 wrote:

Seconds later I posted the question I noticed my mistake, I was supposed to test "-dust no" .

When I use "-dust no" filtering is off.

ADD COMMENTlink written 6.9 years ago by Alper Yilmaz90

thanks for following up, that problem bit me too a few times

ADD REPLYlink written 6.9 years ago by Istvan Albert ♦♦ 86k
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