Question: Prediction of Proteome disorder
0
gravatar for eka0700
5.1 years ago by
eka070030
Bangladesh
eka070030 wrote:

Hello everyone,

I'm going with plant proteome & trying to predict disorder of those proteins. But I didn't find any server which can predict the disorder for whole proteome at a time. I've experienced RONN, PODDLE, MFDP2. Is it feasible for whole proteome? any other tool? If not then please give your valuable suggestion about the work.

Thanks in advance.  

tool disorder proteome • 1.2k views
ADD COMMENTlink modified 2.6 years ago by Biostar ♦♦ 20 • written 5.1 years ago by eka070030

Please explain your research question more clearly.

ADD REPLYlink written 5.1 years ago by 5heikki8.4k
1
gravatar for shelly.deforte
4.1 years ago by
United States
shelly.deforte190 wrote:

I know this is an old question, but I have recently had great luck with RAPID for whole proteome disorder prediction. http://biomine-ws.ece.ualberta.ca/RAPID/index.php

ADD COMMENTlink written 4.1 years ago by shelly.deforte190
0
gravatar for eka0700
5.1 years ago by
eka070030
Bangladesh
eka070030 wrote:

Thanks. I want to calculate the degree of intrinsic disorder in the complete proteome of 2 plants. but the server predict protein disorder for a single sequence or for a limited number of sequences. How can I calculate it for the whole proteome?

ADD COMMENTlink written 5.1 years ago by eka070030
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