Question: Does exome capture kit in TCGA project include UTR region
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6.7 years ago by
United States
mulin0424.li120 wrote:

I would like to call somatic mutations in UTR region of each sample from a TCGA cancer type. However, I am not sure if TCGA used exome capture kit that can cover UTR region. If so, whether all of TCGA cancer types adopted identical exome kits?  

tcga exome sequencing • 2.8k views
ADD COMMENTlink modified 4.6 years ago by Biostar ♦♦ 20 • written 6.7 years ago by mulin0424.li120

This might be better suited for seqanswers, as the question is about a lab kit, not really bioinformatics. Did you ask the data provider directly?

ADD REPLYlink modified 13 months ago by _r_am32k • written 6.7 years ago by Michael Dondrup48k
Yes. I also ask the availability. I can consult TCGA provider either.
ADD REPLYlink modified 6.7 years ago • written 6.7 years ago by mulin0424.li120

Have you found the answer, please?

ADD REPLYlink written 2.3 years ago by -_-880
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