NGS pipeline analyses
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10.2 years ago
Kizuna ▴ 870

Hi Biostars Users,

I am rookie in bio-informatics interested in undergoing NGS training to learn how to build NGS pipeline for whole exome sequencing analyses.

May you please guide me to find a suitable training program?

Best,
Kizuna

next-generation-sequencing • 4.9k views
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Tx David, however I am searching for trainings in WES.

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Well, around 90% of the analyses are the same. But of course, the downstream analysis (everything after mapping) is a bit different. Perhaps we will offer WES workshops next time! :)

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Thank you!

Do you have any information on-site training programs held in institutes like EBI? Broad institute? Sanger institute?

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Sorry, I don't keep track of them but I am pretty sure that they offer variety of NGS training programs. If you search here on Biostars you may find such postings. For example, one such post is A: Upcoming Ngs Data Analysis Workshops 2014

Post it as a separate question if you need more help.

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Sounds very interesting..

Many thanks, I will gladly download it and try it :)

I will let you know

kiz

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10.2 years ago

Perhaps one of out trainings might be of interest to you!

Check out http://www.ecseq.com/training.html

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10.2 years ago
alistairnward ▴ 210

Hi Kizuna,

We, in Gabor Marths lab at Boston College, have an NGS tool and pipeline launcher that is simple to use and can perform a variety of different analyses with prebuilt pipelines. Customizing pipelines is straightforward and we are always available to help. Check out our site at http://gkno.me. The package is easy to download, install and run.

Good luck,
Alistair Ward

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