3d structure Posts

C: Bowtie2 error :: (ERR): bowtie2-align died with signal 6 (ABRT) (core dumped) by shrutidabral • 0
OK i will follow up with your suggestion will report you back . thank you for clarity .
A: Cell line RNA differentially expression gene by Kevin Blighe ♦ 56k
Hi, you must mean RD, as in, ACH-000169, a rhabdomyosarcoma cell-line? It was profiled by the CC...
C: BWA-MEM read groups usage by magnuskerber • 10
Hi, @genomax I added the read group successfully. But something odd happened, my samples number k...
C: which matrix should NMF use in single cell RNA seq data to find diferential gene by hq.huang11.6 • 0
very helpful, thanks a lot.
A: BQSR Recalibration for Mycobacterium Genome Data by 543541656 • 0
According to what the gatk forum said,you can bootstrap a database of known SNPs. Here's how it w...
C: How to Run a Proteome Blast Against a Database and Exclude Proteins that are Sim by marcelofolhas • 0
i've running mad trying to understand how to do blast cause i have no experience with it or linux...
C: How to Run a Proteome Blast Against a Database and Exclude Proteins that are Sim by marcelofolhas • 0
Ok, so, i tried this and thats not what i want.. For example, lets suppose i have a fasta with on...
C: How to Run a Proteome Blast Against a Database and Exclude Proteins that are Sim by Mensur Dlakic • 4.3k
What you are asking is non-trivial, and you are not helping yourself by admitting how little you ...
C: How to Run a Proteome Blast Against a Database and Exclude Proteins that are Sim by genomax ♦ 80k
If you don't know how to use the command line then this analysis is going to be an uphill task. I...
C: Extracting specific gene sequence from genome using perl script by genomax ♦ 80k
Where did you get the script and what was it meant for? It seems to be doing some kind of string ...
C: Choosing the cutoff for e-value when using very small Sequences by ancient_learner • 620
I think II should explain it better. I have a 400 bp sequence (which is a query in my case) like ...
A: How to calculate TMB for somatic data TCGA by Kevin Blighe ♦ 56k
Hey Defne, as you can infer from the comment by sviatoslav.kendall, 'Tumour Mutation Burden' is s...