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Help interpreting Stringtie 'fully covered transcripts' output
assembly rna-seq written 9 weeks ago by freuv • 20 • updated 8 hours ago by h.mon ♦ 18k
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83
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mice whole genome sequencing Analysis
assembly next-gen sequence alignment sequencing written 13 hours ago by tarekzakaria.badr • 0
0
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1
answer
102
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1
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annotate and analyse mutation from cosmic
assembly chip-seq mutation annotation written 3 days ago by sahhomaha • 0 • updated 1 day ago by manuel.belmadani • 50
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1
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83
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1
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Aligning Contigs of various Mtb strains to a reference genome and get the variants
assembly variants mapping gwas written 1 day ago by Paul • 50 • updated 1 day ago by k.kathirvel93 • 90
1
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1
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imposing occupancy values from one bed file to different intervals
assembly written 18 months ago by chrisclarkson100 • 50 • updated 2 days ago by Biostar ♦♦ 20
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1
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124
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1
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which gap filler do you recommend?
genome assembly gapfiller written 2 days ago by Mostafa • 0 • updated 2 days ago by k.kathirvel93 • 90
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95
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Using RepeatModeler for novel assembled genome
genome assembly repeatmodeler written 3 days ago by nehleen11 • 0 • updated 3 days ago by WouterDeCoster ♦ 31k
1
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1
answer
126
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1
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Giga base or Giga byte
gb assembly coverage written 3 days ago by Shawrob400 • 0
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142
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5 follow
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Issue with Samtools variant calling
genome assembly alignment written 8 weeks ago by williamsbrian5064 • 90 • updated 3 days ago by Biostar ♦♦ 20
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832
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How to detect segmental duplications?
genome assembly alignment written 23 months ago by lamz138138 • 40 • updated 3 days ago by WouterDeCoster ♦ 31k
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80
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A way to verify that GFF and Fasta files make a valid pair (came from the same project version)
genome assembly written 4 days ago by Denis • 30
0
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1
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141
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1
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Construction of download links for genbank files from NCBI gene database
gene assembly written 5 days ago by amir.taheri.ghahfarokhi • 0 • updated 4 days ago by genomax ♦ 54k
2
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77
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Tools for annotating UTRs
genome assembly sequencing written 4 days ago by bgbrink • 20
2
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71
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Blast run for de novo assembly analysis using command line
gene assembly next-gen alignment written 5 days ago by sauravzoology88 • 0
1
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83
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Tool: Interactive global map of human genome assemblies that use long read sequencing (PacBio) data.
wgs assembly tool human pacbio written 6 days ago by tjduncan • 180
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Job: Lead Bioinformatician at Kew Gardens, Richmond UK
assembly next-gen job sequencing written 6 days ago by paul2001sw • 10 • updated 6 days ago by Devon Ryan ♦ 82k
0
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2
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140
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2
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How to map UCSC transcripts to gene symbol?
genome assembly rna-seq written 7 days ago by wenbinm • 0 • updated 7 days ago by Alex Reynolds ♦ 25k
1
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61
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News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
assembly news rna-seq training written 8 days ago by AABI • 100
2
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1
answer
114
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1
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Which are the regulatory regions among the following?
assembly sequencing written 8 days ago by banerjeeshayantan • 70 • updated 8 days ago by jared.andrews07 • 880
2
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111
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How to find shared uniprotIDs across 7 metagenomic assemblies?
gene R assembly written 8 days ago by manpy64 • 0
4
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3
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5 follow
3
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[PacBio assembly] Remaining indels after polishing
assembly polishing pacbio quiver written 14 months ago by Roxane Boyer • 690
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59
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Generate Consensus sequence with structural variants and rearrangements
genome assembly next-gen alignment written 9 days ago by hainst2111 • 0 • updated 9 days ago by finswimmer ♦ 4.5k
0
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1
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79
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1
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Segmentation fault when running Minia v3 with some kmer values
software error assembly minia written 14 days ago by matthew.nicotra • 0 • updated 10 days ago by Rayan Chikhi • 1.4k
7
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4
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219
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5 follow
4
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Buy PC for metagenomics
genome assembly next-gen alignment written 6 weeks ago by lugonauta • 0 • updated 10 days ago by MetaTK • 0
5
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2
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2.0k
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2
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genome assembly software
genome assembly written 23 months ago by nora • 40 • updated 10 days ago by MetaTK • 0
2
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2
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114
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2
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How to make a paired-end reverse file
assembly next-gen written 11 days ago by fb_marinho88 • 0 • updated 11 days ago by h.mon ♦ 18k
2
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1
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104
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1
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How to convert Merlin phased result files to vcf
genome assembly snp software error written 13 days ago by moushengxu • 310
1
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2
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219
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2
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Annotation pipelines in 2018
genome assembly rna-seq gene written 12 days ago by Ric • 190 • updated 11 days ago by Roxane Boyer • 690
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120
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gff file of constituent enhancer For Young algorithm
assembly written 7 weeks ago by dimitrischat • 50 • updated 12 days ago by Biostar ♦♦ 20
7
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1
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201
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5 follow
1
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BAM to FASTQ picard or samtools
assembly next-gen sequencing written 12 days ago by anoops • 10 • updated 12 days ago by h.mon ♦ 18k
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