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<prev • 2,777 results • page 1 of 93 • next >
3
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Python scripting for adding gene name into gff annotation file
genome gene sequence assembly written 2.6 years ago by ahmed.elfarargi • 10 • updated 6 hours ago by wag • 0
0
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1
answer
61
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1
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A smaller alternative to NA12878 assembly?
genome assembly next-gen written 1 day ago by 65460clo • 0 • updated 16 hours ago by h.mon ♦ 23k
1
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0
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46
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0
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Minimap2 generated a very large paf, and miniasm failed to get gfa, how to do with it ?
genome assembly written 16 hours ago by lovenlong • 10
5
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2
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107
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2
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How to get proteins from GFF file resulted from MAKER annotation
genome assembly maker gff3 fasta written 1 day ago by imda • 0 • updated 21 hours ago by jean.elbers • 510
0
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1
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61
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1
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Forum: Data base platform with dispair biological data
genome assembly forum alignment sequencing written 1 day ago by patmedbur • 0 • updated 1 day ago by Asaf ♦ 5.2k
2
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1
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58
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1
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Is there a way to segregate Plasmid contigs from Iontorrent WGS data?
ion torrent wgs plasmid assembly written 1 day ago by Optimist • 40 • updated 1 day ago by 5heikki ♦ 8.1k
3
votes
1
answer
110
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1
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Good coverage value for de novo assembly with NanoPore Reads?
assembly sequencing ont written 3 days ago by marianaer98 • 0 • updated 2 days ago by colindaven • 1.0k
1
vote
1
answer
75
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1
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Number of Wheat transcript varies
genome assembly sequencing written 2 days ago by K S • 0 • updated 2 days ago by RamRS ♦ 20k
4
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1
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106
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5 follow
1
answer
Reference genome of wheat for Bowtie
genome assembly next-gen sequencing written 2 days ago by K S • 0 • updated 2 days ago by JC ♦ 7.3k
1
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2
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94
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2
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Get the divergence between two species with a ref genome and reads
vcf assembly mapping written 9 days ago by maxime.policarpo • 50
0
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0
answers
102
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0
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Assembly and consensus tools for Nanopore reads from amplicons
assembly written 7 days ago by Vitis • 1.9k
0
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0
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54
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0
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cmake error installing Reapr and kiki
installation assembly reapr kiki cmake written 7 days ago by Vimac • 0 • updated 7 days ago by ATpoint ♦ 13k
2
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0
answers
152
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0
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bash script loop to join multiple amplicon seq, pair end read on HPC server using ea-utils fastq- join
assembly written 4 weeks ago by Bioinfonext • 120 • updated 7 days ago by RamRS ♦ 20k
2
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2
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116
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2
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Gff3 - moving an annotation from scaffold level to pseudomolecule level
assembly annotation written 8 days ago by Philipp Bayer ♦ 5.9k • updated 7 days ago by Carambakaracho • 750
2
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1
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102
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1
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#String operation#protein-protein interaction #R platform
gene R assembly protein-protein interaction written 8 days ago by slg.manti • 0 • updated 8 days ago by RamRS ♦ 20k
1
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0
answers
79
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0
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Fetching the assembled sequence from BWA aligned reads to reference genome
assembly bwa written 8 days ago by sharadlko1 • 0
1
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0
answers
74
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0
answers
Extracting alignment coordinates from SAM file
assembly alignment sequencing written 8 days ago by dasakan • 0
0
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1
answer
1.1k
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1
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How to detect segmental duplications?
genome assembly alignment written 2.4 years ago by lamz138138 • 40 • updated 9 days ago by Samir • 140
1
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1
answer
130
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1
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How to download all the genome sequences (including draft and complete) of a particular genus bacteria available in NCBI?
genome assembly next-gen sequence written 5 weeks ago by Dineshkumar K • 0 • updated 9 days ago by vmicrobio • 240
0
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0
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72
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0
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Explanation? Read depth, quality, and assembly accuracy in Methylome analysis context
genome assembly forum methylation written 10 days ago by davidfarr01 • 10
2
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2
answers
176
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6 follow
2
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How to predict complementary nucleotide sequence?
genome assembly alignment blast written 11 days ago by Neu • 10 • updated 10 days ago by biobiu • 10
8
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0
answers
238
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5 follow
0
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Using Bandage to finish ambiguous long-read assembly?
unicycler assembly long reads bandage written 8 weeks ago by predeus • 820 • updated 10 days ago by Biostar ♦♦ 20
1
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0
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68
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0
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Question : platanus assemble error " File not open "
platanus ngs assemble assempler assembly written 11 days ago by mireiya.ryo • 0 • updated 11 days ago by finswimmer ♦ 9.8k
2
votes
1
answer
88
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1
answer
TCGA RNAseq Data is normalized against which Genome version
assembly rna-seq written 11 days ago by rajesh • 60 • updated 11 days ago by genomax ♦ 62k
1
vote
1
answer
131
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5 follow
1
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Easy way to assemble sequences from a plasmid insert
sanger clone assembly plasmid written 21 days ago by gbl1 • 60 • updated 11 days ago by colindaven • 1.0k
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0
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107
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0
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"bowtie2 died with signal 9 (KILL)" error message, having trouble figuring out how to fix my script
software error assembly alignment bowtie2 written 12 days ago by meerapprasad • 10 • updated 12 days ago by genomax ♦ 62k
1
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0
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96
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0
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Which rice genome should I use for reference based transcriptome assembly of indica varieties of rice
genome assembly referance indica nipponbare written 12 days ago by sharadlko1 • 0
1
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0
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99
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0
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Reference sequence for indica Rice Paired End reads assembly using HISAT2
rice assembly referance indica hisat2 written 14 days ago by sharadlko1 • 0
4
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2
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361
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5 follow
2
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Seeking for a Linux based script ?
assembly alignment written 16 days ago by guskalja • 10
2
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1
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1.6k
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1
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bowtie2-align exited with value 139
software error bowtie2 next-gen alignment assembly written 15 months ago by anu014 • 160 • updated 15 days ago by msg • 0
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