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<prev • 2,569 results • page 1 of 86 • next >
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make a reference genome for BRIG (pan-genome analysis)
genome assembly written 11 hours ago by pascalandres182 • 0 • updated 11 hours ago by goodez • 280
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1
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90
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Aligning multiple species for primer
assembly alignment written 1 day ago by jpatrickecf • 0 • updated 16 hours ago by h.mon ♦ 20k
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53
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What is an optical map ?
assembly scaffold optical map written 18 hours ago by Picasa • 380
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37
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Trinity ERROR during assembling extracted reads
assembly trinity written 18 hours ago by evodevo110 • 0
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38
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Mapping softwares setting minimum matching read length
genome assembly next-gen sequencing gapclosing written 19 hours ago by sumaluzn • 0
4
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1
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142
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What are the recommended methods for merging de-novo assemblies?
assembly sequencing written 1 day ago by O.rka • 60 • updated 1 day ago by Damian Kao ♦ 15k
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4
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6 follow
4
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How to recover a 16S rRNA gene from genome reads?
genome rrna denovo assembly written 18 months ago by fhsantanna • 410 • updated 1 day ago by jeremieaauger • 0
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62
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Difference between proper paired reads and mapped and paired reads
assembly written 1 day ago by bio_student • 0 • updated 1 day ago by Pierre Lindenbaum ♦ 113k
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1
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64
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1
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SRA Raw data download on windows
assembly written 1 day ago by sehrish76616 • 0 • updated 1 day ago by genomax ♦ 57k
3
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1
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113
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1
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BSgenome.Hsapiens.UCSC.hg38 vs BSgenome.Hsapiens.NCBI.GRCh38
genome R version assembly written 18 days ago by ZheFrench • 140 • updated 2 days ago by igor ♦ 6.8k
18
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3
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328
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11 follow
3
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Tutorial: Which human reference genome should I use?
genome assembly tutorial alignment written 9 days ago by finswimmer ♦ 6.2k
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171
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How to find shared uniprotIDs across 7 metagenomic assemblies?
gene R assembly written 9 weeks ago by manpy64 • 10 • updated 3 days ago by Biostar ♦♦ 20
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154
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NovoPlasty is producing identical Assemblies
assembly novoplasty mitochondria written 10 weeks ago by micro32uvas • 0 • updated 3 days ago by Biostar ♦♦ 20
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1
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158
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Can you assemble with merged paired end reads and unmatched reads as "single ended" reads?
assembly written 6 days ago by O.rka • 60
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1
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Extracted mapped shotgun metagenomic reads to reference genome. SPAdes or metaSPAdes for de-novo assembly?
de-novo assembly metagenomics written 6 days ago by O.rka • 60 • updated 4 days ago by h.mon ♦ 20k
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no successful variants lifted over from hs37d5_plusRibo_plusOncoViruses_plusERCC.fa to GRCh38
assembly written 3 months ago by jing.mengrabbit • 10 • updated 4 days ago by tiwari.tanushree • 0
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1
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1
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doubts about genome assembly and ensembl
genome browser ucsc ensembl snp assembly written 3.8 years ago by palliyath91 • 0 • updated 4 days ago by Biostar ♦♦ 20
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Best tools for genome assembly with paired-end, mate pair and linked read (10x) data
genome assembly written 4 days ago by hirad.alipanah • 0
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97
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Haplotype reconstruction using PredictHaplo
assembly poolseq written 5 days ago by uab973 • 0
1
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106
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Unable to find adapter seq using Fastp
software error assembly sequence fastp sequencing written 6 days ago by divyojsingh • 0 • updated 6 days ago by genomax ♦ 57k
3
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3
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2.1k
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3
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How to plot length distribution of contigs in the assembly?
plotting assembly length distribution written 3.1 years ago by seta • 1.0k • updated 7 days ago by Vijay Lakhujani ♦ 3.1k
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What is the fate of low coverage region during Trinity assembly of transcriptome data?
trinity transcriptome assembly written 7 days ago by MAPK • 1.3k
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picard CollectInsertSizeMetrics error
genome assembly alignment written 7 days ago by sunnykevin97 • 0 • updated 7 days ago by finswimmer ♦ 6.2k
4
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1
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73
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1
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Best state-of-the-art tool for ab initio-based gene prediction / annotation of genome assemblies
assembly written 7 days ago by JJ • 360
4
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1
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173
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5 follow
1
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Illumina HiSeq generates abnormally high duplication levels and per tile sequence quality patterns in rapid-run mode
assembly quality check next-gen phage hiseq written 9 days ago by edikedikedikedik • 0
0
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How to identify contigs containing the degenerate primer sequences using python?
assembly sequence python written 5 weeks ago by xupbuy • 0 • updated 8 days ago by gb • 440
1
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1
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102
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1
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k-mer based methods to piece sequenced amplicons together?
k-mer assembly alignment written 9 days ago by laurenkleine18 • 0 • updated 9 days ago by genomax ♦ 57k
1
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1
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115
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1
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Reference based assembly
assembly reference written 14 days ago by deepti1rao • 20 • updated 9 days ago by h.mon ♦ 20k
2
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2
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129
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Remove contamination before assembly
genome assembly draft genome written 12 days ago by bruseq • 20 • updated 9 days ago by h.mon ♦ 20k
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5
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403
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7 follow
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Forum: On the usage of Golang
next-gen assembly forum alignment written 10 days ago by Lucas Peres • 50 • updated 9 days ago by Samuel Lampa • 1.2k
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