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Job: Bioinformatics PostDoc in the Laboratory of Forest Genomics, Russia, Siberia
assembly next-gen job rna-seq plant genomics wgs written 59 minutes ago by yaputintseva • 0
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What's the difference between Unaligned and Unmatched in rnaQUAST output?
assembly quality rna-seq rnaquast written 1 day ago by lcsousapaula • 10
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Capturing whole gene sequences from WGS metagenomics sample
assembly metagenomics contigs binning written 1 day ago by Lina F • 80 • updated 1 day ago by Sej Modha • 1.3k
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about weeSam command
assembly next-gen alignment written 2 days ago by jacobnix • 0 • updated 2 days ago by Sej Modha • 1.3k
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stringtie Error: input file cannot be found
assembly sequence rna-seq alignment written 7 weeks ago by mjavad2012 • 0 • updated 2 days ago by Ellango R • 0
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Is there any tool to convert a contig to illumina reads?
assembly contigs illumina written 2 days ago by m.koohi.m • 50
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130
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Transcript Extension using RNA-seq data
assembly rna-seq written 2 days ago by biofalconch • 250
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118
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The same results with various dataset by cufflinks
assembly alignment mapping cufflinks written 4 days ago by seta • 890
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167
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5 follow
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How to get nucleotide sequence from BAM file
sequence assembly alignment blast written 7 days ago by davonairos • 0 • updated 4 days ago by WouterDeCoster ♦ 18k
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Miniasm Assembler producing smaller size of reads
assembly written 4 days ago by s.kyungyong64 • 0
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Use PacBio FASTQ reads to polish\correct a PacBio Fasta assembly without Quiver
assembly fastq pacbio polish correct written 6 days ago by gabri • 10 • updated 5 days ago by sutturka • 80
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123
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Streptococcus genome alignments
assembly mapping written 5 days ago by skbrimer • 340
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SSPACE assembling Genome!
assembly myposts written 19 months ago by fufuyou • 90 • updated 5 days ago by sutturka • 80
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Does mRNA RefSeq of a gene differs from transcript to transcript for the same species?
gene assembly sequence written 7 days ago by varsha • 0 • updated 6 days ago by kristoffer.vittingseerup • 80
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BLAST IDs into gene names? (Diamond)
gene R rna-seq blast assembly written 6 days ago by BioBing • 70 • updated 6 days ago by Sej Modha • 1.3k
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How to improve existing transcriptome annotation using cufflink protocol ?
assembly cufflink cuffmerge transcriptome written 8 days ago by Chirag Parsania • 240 • updated 8 days ago by kristoffer.vittingseerup • 80
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Installing Ray meta assembler on ubuntu 16.04 LTS
assembly written 8 days ago by glady • 190
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lots of transcript start at 0 and end at 1 in cufflinks output gtf file
assembly rna-seq written 8 days ago by lwhbackup • 0 • updated 8 days ago by Charles Plessy • 2.0k
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Demultiplexing paired-end illumina data with seprated R1 file, R2 file and index file
assembly sequencing written 8 days ago by khaled.mirzayi • 0 • updated 8 days ago by genomax ♦ 29k
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Help needed interpreting/integrating WebMGA KOG results onto transcriptome (FASTA)
assembly rna-seq kog annotation written 12 days ago by moldach • 0 • updated 9 days ago by Philipp Bayer ♦ 4.2k
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Tools and parameters for reference assisted eukaryotic genome assembly using a draft genome as reference
assembly ngs written 10 days ago by WMJ • 10
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Unmapped Pairs in Bam file
assembly next-gen bam alignment written 13 days ago by user191006 • 10 • updated 10 days ago by Devon Ryan ♦ 68k
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1
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How to do genome guided denovo assembly? If not, how to align the denovo assembled bam to a particular reference genome?
genome assembly alignment allpathslg paralogous written 12 days ago by kirannbishwa01 • 450 • updated 10 days ago by h.mon ♦ 6.6k
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News: Physalia-Course: Introduction to Linux and workflows for biologists-2 spots left (Berlin)
assembly news next-gen unix alignment written 3 months ago by carlo.pecoraro2 • 310
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confusion in the DeBruijn Graph
debruijn assembly graph written 16 months ago by midox • 180 • updated 12 days ago by lh3 ♦ 29k
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News: Bioinformatics for geneticists and biologists - Part funded scholarships
assembly news next-gen rna-seq blast written 13 days ago by oliverhooker • 60
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News: 2 Days Hands on Workshop on Transcriptome-Seq Data Analysis
assembly news rna-seq snp sequencing written 14 days ago by clovergenls • 0
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102
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How to subset a UCSC table
assembly written 13 days ago by ddzhangzz • 40
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90
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Sequence Header Convertion from Nanopore to PacBio
assembly alignment written 13 days ago by dani357 • 0 • updated 13 days ago by genomax ♦ 29k
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6 follow
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When I install samtools, the linux cannot find -lcurses and cannot find -lz. How can I tangle these problems?
software error assembly sequence written 26 days ago by 18137792217 • 0
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