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<prev • 3,324 results • page 1 of 111 • next >
2
votes
3
answers
134
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6 follow
3
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Is this a good way to find non-coding transcripts from stranded RNA-seq data?
assembly rna-seq written 5 days ago by c_u • 140
3
votes
0
answers
36
views
0
answers
Finding the coverage of variants from variant file, which has no DF4 field
assembly rna-seq written 4 hours ago by a.james • 210
1
vote
1
answer
47
views
1
answer
The Picard FilterSAM READ is throwing error
reads assembly picard rna-seq written 1 day ago by a.james • 210 • updated 1 day ago by Pierre Lindenbaum ♦ 124k
5
votes
3
answers
60
views
3
answers
How to extract a particular region from a nucleotide contig?
assembly sequence written 1 day ago by saadleeshehreen • 70 • updated 1 day ago by Pierre Lindenbaum ♦ 124k
0
votes
0
answers
88
views
0
answers
Platanus_allee assembler failed contig assembly
assembly written 14 days ago by 18140010 • 0 • updated 2 days ago by odogan • 0
0
votes
1
answer
96
views
1
answer
Bowtie2 error RNA seq aligning to genome
assembly alignment rna-seq written 4 days ago by nidhi.vijayan13 • 10 • updated 4 days ago by genomax ♦ 74k
1
vote
1
answer
86
views
1
answer
Assembly quality check
assembly polishing pacbio canu written 4 days ago by devarora • 10 • updated 4 days ago by hafiz.talhamalik • 210
3
votes
0
answers
72
views
0
answers
Mauve program will not open
gene assembly alignment written 4 days ago by hoffmavl1 • 10
5
votes
0
answers
136
views
0
answers
Genome size estimation using Kmergenie
genome assembly next-gen sequencing written 5 weeks ago by Rahul • 30 • updated 5 days ago by Biostar ♦♦ 20
1
vote
0
answers
84
views
0
answers
Ho to assembly MiSeq reads from BAC clones into a contig in fasta format?
assembly bac library next-gen sequencing written 5 days ago by alebesc • 0 • updated 5 days ago by genomax ♦ 74k
0
votes
0
answers
51
views
0
answers
Basic DBG assembly algorithm question
assembly algorithm graph dbg written 6 days ago by Ergodsan • 0
5
votes
1
answer
67
views
1
answer
Mutation calling for pediatric cancer data
assembly snp written 6 days ago by banerjeeshayantan • 140
0
votes
1
answer
531
views
1
answer
how to make query list and reference list of genome in fastANI tool
genome software error next-gen alignment assembly written 17 months ago by biotechpedia • 0 • updated 6 days ago by Nay Catina Dia • 0
3
votes
0
answers
84
views
0
answers
Why map reads back to assembly?
sequence assembly next-gen alignment written 7 days ago by macielrodriguez2 • 20
8
votes
1
answer
477
views
6 follow
1
answer
Recommended open-source assembler on desktop computer?
genome assembly sequencing written 16 months ago by grantregis • 10 • updated 7 days ago by surovisaikia • 0
0
votes
0
answers
50
views
0
answers
Script for Assemble tandemly repeated on paired-end reads
assembly repeat tandem paired-end written 7 days ago by milan.calegari • 0
8
votes
2
answers
4.2k
views
11 follow
2
answers
10x Supernova de novo assembly
10x assembly written 2.9 years ago by igor ♦ 8.8k • updated 7 days ago by samnioue • 0
1
vote
0
answers
75
views
0
answers
Is there any tool available for sequence alignment concatenation and supermatrix file generation other than Fastconcat-G?
software error bioinformatics alignment assembly written 8 days ago by Dineshkumar K • 30
0
votes
1
answer
70
views
1
answer
What is the difference between left alignment and right alignment?
genome assembly sequence sequencing written 8 days ago by karthick.n • 10 • updated 8 days ago by Jean-Karim Heriche ♦ 21k
3
votes
0
answers
240
views
0
answers
Assembly statistics: ABySS & BBMap
assembly bbmap abyss written 5 weeks ago by el97004 • 10
0
votes
0
answers
56
views
0
answers
Mummer for running multiple query files
assembly mummer alignment nucmer written 9 days ago by Ambika • 30
0
votes
1
answer
63
views
1
answer
Removing adapters for assembly
assembly abyss written 10 days ago by Ric • 280 • updated 10 days ago by Mensur Dlakic • 2.2k
0
votes
0
answers
80
views
0
answers
error in trinity
assembly alignment rna-seq written 12 days ago by fatimarasool135 • 40
0
votes
0
answers
717
views
0
answers
Cuffmerge error : cuffcompare not found
assembly written 2.1 years ago by matine • 0 • updated 10 days ago by collinsagho • 0
3
votes
0
answers
187
views
0
answers
is it code is python + bash .....and what is this AssignGenes.py ?
assembly next-gen rna-seq sequencing written 21 days ago by lal • 0
0
votes
0
answers
102
views
0
answers
snpEff build not working with gff3
software error assembly snp written 27 days ago by trinidadmartinc • 0 • updated 11 days ago by Biostar ♦♦ 20
1
vote
0
answers
128
views
0
answers
locating positions of a Fasta seq in bam file
assembly written 11 days ago by ahmedakhokhar • 110
1
vote
1
answer
120
views
1
answer
Combining files based on chromosome and position next to each other - column vise
assembly coverage sequencing written 12 days ago by Gene • 10 • updated 12 days ago by Pierre Lindenbaum ♦ 124k
7
votes
2
answers
120
views
2
answers
loading yaml file into snakemake
software error assembly written 14 days ago by skbrimer • 590
2
votes
1
answer
118
views
1
answer
trying to export DNA sequences into excel so that there are three nucleotides per column
assembly alignment sequencing written 13 days ago by ashrafm2 • 0
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