Showing: assemblyreset
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47
votes
5
answers
20k
views
21 follow
5
answers
News: The New Grch38 Human Genome Browser Has Arrived!
assembly news grch38 hg38 ucsc written 4.8 years ago by Giovanni M Dall'Olio26k • updated 3.0 years ago by Jeremy Leipzig18k
75
votes
9
answers
19k
views
28 follow
9
answers
How To Assess The Quality Of An Assembly? (Is There No Magic Formula?)
assembly quality next-gen written 5.9 years ago by diltsjeri420 • updated 5 months ago by alslonik50
22
votes
3
answers
19k
views
5 follow
3
answers
What Does The "N50" Mean?
assembly written 8.7 years ago by Bioch'Ti1000 • updated 7.9 years ago by Ketil3.9k
11
votes
1
answer
17k
views
1
answer
what is the difference between GRCh37 and hg19 ?
genome assembly alignment rna-seq written 4.0 years ago by jack730 • updated 7 months ago by gandrescabrera80
67
votes
10
answers
14k
views
35 follow
10
answers
Assessing The Quality Of De Novo Assembled Data
assembly next-gen written 6.5 years ago by Prakki Rama2.2k • updated 3 months ago by Corentin170
13
votes
4
answers
13k
views
6 follow
4
answers
Bowtie2 parameters for best alignment
genome assembly alignment blog snp written 4.5 years ago by cvu120 • updated 7 months ago by saraholiver3070
36
votes
9
answers
12k
views
11 follow
9
answers
Circular Genome??
genome assembly written 7.8 years ago by Bdv290 • updated 3.5 years ago by 5heikki7.9k
41
votes
12
answers
12k
views
23 follow
12
answers
Which Assembler To Use For Metagenomic Sequences?
assembly metagenomics written 8.7 years ago by Panos1.6k • updated 5.3 years ago by ugly.betty771.0k
38
votes
10
answers
12k
views
27 follow
10
answers
Recommendations For Heterozygous Genome Assembly Software
genome assembly miseq illumina written 5.8 years ago by Leszek3.9k • updated 11 months ago by dmathog30
16
votes
2
answers
11k
views
2
answers
nr- protein database
assembly next-gen blast sequencing written 3.3 years ago by akhilvbioinfo130 • updated 20 months ago by gu.fernandezn0
51
votes
10
answers
11k
views
14 follow
10
answers
What tools you use or know for PacBio Long Read error correction?
software assembly sequence sequencing written 3.9 years ago by Medhat8.0k • updated 3.6 years ago by pengchy410
44
votes
7
answers
11k
views
25 follow
7
answers
Best software to assemble bacterial genomes
illumina bacteria assembler assembly written 4.1 years ago by fhsantanna420 • updated 10 months ago by Biostar ♦♦ 20
9
votes
0
answers
11k
views
0
answers
News: Bio-Linux 8 is now available
assembly next-gen genome news alignment rna-seq written 4.4 years ago by rtliu2.0k • updated 3.6 years ago by liangqinsi20
17
votes
0
answers
10k
views
16 follow
0
answers
Tool: Tools to merge overlapping paired-end reads
assembly overlapping ngs fastq tool written 2.0 years ago by Abdul Rafay Khan890 • updated 4 months ago by kate.j.mckenzie0
7
votes
1
answer
9.7k
views
1
answer
Newbler Download
assembly differential-expression written 6.0 years ago by Nino20 • updated 6.0 years ago by Manu Prestat3.9k
0
votes
1
answer
9.6k
views
1
answer
Kobas.2.0 : KEGG annotation
assembly next-gen go rna-seq sequencing written 2.4 years ago by jinutchirayath0 • updated 2.4 years ago by WouterDeCoster35k
22
votes
3
answers
8.3k
views
9 follow
3
answers
Mapping Reads Back To Assembly Contigs
assembly contigs mapping read written 6.7 years ago by David M550 • updated 6.7 years ago by ALchEmiXt1.9k
8
votes
3
answers
8.3k
views
3
answers
Annotate .bed file with gene names
genome assembly next-gen written 4.1 years ago by stevenlang123130 • updated 16 months ago by windsur10
48
votes
3
answers
8.2k
views
29 follow
3
answers
Tutorial: Genome Assembly Review Papers
assembly tutorial papers written 6.3 years ago by Istvan Albert ♦♦ 78k • updated 5.8 years ago by lh331k
8
votes
4
answers
8.0k
views
6 follow
4
answers
26
votes
7
answers
8.0k
views
15 follow
7
answers
What Is The Most Memory-Efficient De Novo Assembler?
assembly memory hiseq written 7.6 years ago by toshnam610 • updated 7.6 years ago by Shaldenby10
14
votes
1
answer
7.9k
views
1
answer
Error while running BWA mem
assembly next-gen alignment sequencing written 3.5 years ago by ravi.uhdnis140 • updated 3 months ago by RamRS19k
4
votes
1
answer
7.8k
views
1
answer
Where can I download the NCBI reference genome for mouse GRCm38
genome assembly written 3.5 years ago by lojomorris0 • updated 3.5 years ago by Evgeniia Golovina940
16
votes
2
answers
7.7k
views
2
answers
How does kmer length affect total assembly size?
assembly (velvet) written 3.6 years ago by StarCute110 • updated 3.6 years ago by Antonio R. Franco3.9k
39
votes
5
answers
7.6k
views
8 follow
5
answers
A Question About Hybrid Assembly
assembly illumina written 7.5 years ago by Lhl730 • updated 7.4 years ago by Benm710
8
votes
2
answers
7.6k
views
2
answers
Creating reference Index using Bowtie2
genome assembly next-gen alignment written 4.4 years ago by cvu120 • updated 4.0 years ago by peeyushsahu250
47
votes
13
answers
7.6k
views
14 follow
13
answers
What is the best programming language for NGS data analysis pipeline development?
assembly rna-seq written 4.6 years ago by jack730 • updated 4.6 years ago by Björn650
7
votes
2
answers
7.3k
views
2
answers
STAR aligner generating genomes takes long time
assembly rna-seq written 3.0 years ago by xcalle9120 • updated 8 months ago by msimmer9250
5
votes
1
answer
7.2k
views
1
answer
Files ending with .fna.gz, .gbff.gz, .gff.gz, .faa.gz & gpff.gz
assembly sequence written 2.6 years ago by Naresh60 • updated 2.6 years ago by Michael Dondrup45k
2
votes
2
answers
7.1k
views
2
answers
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