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Breakdancer parameter -t labels non-CTX events as CTX
breakdancer translocation written 2.6 years ago by athena (˚▽˚) • 0 • updated 6 months ago by Biostar ♦♦ 20
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Interpreting translocation breakpoints from BreakDancer
genome assembly next-gen breakdancer sequencing written 10 months ago by tg25 • 0
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330
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Using BreakDancer output file with BreakDown
next-gen breakdancer breakdown sequencing written 10 months ago by tg25 • 0
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462
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Problems with breakdancer (sv caller) output.
sv breakdancer next-gen svtyper delly written 11 months ago by unique379 • 80
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Breakdancer : bam2cfg.pl doesn't work with merged bam
breakdancer written 2.0 years ago by Rox • 1.1k
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640
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Any techniques faster than Breakdancer?
sv breakdancer structural variant dna written 2.1 years ago by boyu93 • 10 • updated 2.1 years ago by Eric T. • 2.5k
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991
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1
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CNV detection using beakdancer and SVDetect
svdetect breakdancer cnv written 2.1 years ago by kk.mahsa • 100 • updated 2.1 years ago by d-cameron • 2.1k
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Breakdancer : samtools pid process 7845 is still there... invoking kill -9 on 7845 ... Closing samtools process : 7845
7845 breakdancer samtools kill written 2.4 years ago by johnnytam100 • 100
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Breakdancer : Can't locate Statistics/Descriptive.pm in @INC while trying to run bam2cfg.pl
perl breakdancer bam2cfg.pl inc written 2.4 years ago by johnnytam100 • 100 • updated 2.4 years ago by amy.bashir • 80
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Problem using Breakdancer
breakdancer written 3.8 years ago by jamessemaj712 • 10 • updated 2.5 years ago by Biostar ♦♦ 20
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odd size of breakdancer INV
structural variants inv breakdancer inversions written 2.8 years ago by kirill1984 • 0
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Bam2Cfg Parameter Description
breakdancer written 6.9 years ago by ryan.hartmaier • 0 • updated 3.0 years ago by lionair • 10
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Forum: Questions about the mechanism behind breakdancer-max
structure variant forum breakdancer written 3.2 years ago by Darren Lin • 0
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Breakdancer Bam2Cfg.Pl , Coefficient Of Variation Is Too Large, Not Excluding Outliers?
breakdancer written 6.4 years ago by William • 4.5k • updated 3.6 years ago by Biostar ♦♦ 20
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2
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all the SV type of breakdancer output are ITX is that correct?
structural variants sv detection breakdancer written 4.2 years ago by jmche • 0 • updated 3.8 years ago by Biostar ♦♦ 20
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Question about Breakdancer output
breakdancer written 4.0 years ago by hxlei613 • 90
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3
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3
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Questions about BreakDancer
ngs breakdancer cnv written 4.1 years ago by hxlei613 • 90 • updated 4.1 years ago by trausch • 1.4k
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Problem to install Breakdancer on Mac OS X
mac os x breakdancer written 4.6 years ago by fbesnard • 40 • updated 4.2 years ago by Biostar ♦♦ 20
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breakdancer - cfg creation and chi square problem
rnaseq breakdancer written 4.2 years ago by TriS • 4.0k
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Build Breakdancer Fails
breakdancer written 6.0 years ago by m.kooijman • 0 • updated 4.3 years ago by Biostar ♦♦ 20
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Understanding flags from output of bam2cfg.pl - BreakDancer
flag breakdancer bam2cfg written 4.5 years ago by Vladimir Bajić • 0 • updated 4.5 years ago by ernfrid • 200
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filter BreakDancer output
sv variant breakdancer structural written 4.7 years ago by biostud • 0
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Breakdancer: bam2cfg.pl error
breakdancer written 4.8 years ago by Peter • 0 • updated 4.8 years ago by ernfrid • 200
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1
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BreakDancer make error
breakdancer written 4.8 years ago by Peter • 0
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1
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Breakdancer output error
matepair ngs breakdancer strcutural variations written 5.0 years ago by shumaila.sayyab • 0 • updated 5.0 years ago by ernfrid • 200
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BreakDancer is giving blank output!
breakdancer rna-seq written 5.2 years ago by anshuman.mit • 0 • updated 5.1 years ago by ernfrid • 380
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The importance of LB field in @RG tag for BreakDancer analysis
wgs lb @rg breakdancer written 5.3 years ago by Nicola Casiraghi • 450 • updated 5.3 years ago by Devon Ryan ♦ 93k
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Breakdancer Somatic Sv Input Order Of Tumor And Normal Bam Files
sv breakdancer written 7.3 years ago by g.skullcap • 0 • updated 5.3 years ago by Biostar ♦♦ 20
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5 follow
1
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Breakdancer Max Kahan Error:0
breakdancer error written 5.8 years ago by Jack • 60 • updated 5.7 years ago by ernfrid • 380
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Can Breakdancer Be Used On Bwa Mem Alignments?
sv breakdancer bwa written 5.8 years ago by zhangleisdau • 0 • updated 5.8 years ago by Jack • 60
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