Showing: cnvkitreset
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cnvkit flasso interrupt
exome cnvkit written 29 days ago by gab20
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1
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 2.6 years ago by alons260 • updated 4 weeks ago by RamRS18k
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Error : run cnvkit from bam
software error cnvkit written 6 weeks ago by reany0 • updated 6 weeks ago by finswimmer6.2k
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Running cnvkit batch with -y parameter
cnvkit next-gen copynumber sequencing written 7 weeks ago by alyza0 • updated 6 weeks ago by Eric T.2.3k
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Best variant caller for CNVkit
cnvkit written 10 weeks ago by milos-910 • updated 10 weeks ago by Eric T.2.3k
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How to get the range of LOH?
cnvkit written 14 months ago by Tonny20 • updated 12 weeks ago by Shixiang20
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CNVkit: gene results not in output
cnvkit written 3 months ago by Lauren20 • updated 3 months ago by Eric T.2.3k
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minus integer copy number when using --purity for cnvkit
cnvkit written 4 months ago by xiaoqiaoliu0 • updated 3 months ago by Eric T.2.3k
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Using CNVkit to identify poor-quality normal samples
cnvkit written 4 months ago by Andy Lee20 • updated 4 months ago by Eric T.2.3k
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confused about how to run pipeline
cnvkit written 5 months ago by andrew.lamb0 • updated 5 months ago by toralmanvar650
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CNV details about the normal samples?
cnvkit cnv written 5 months ago by kvn95ss0 • updated 5 months ago by toralmanvar650
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cnvkit example data
cnvkit bam cnv written 2.4 years ago by laxvid10 • updated 7 months ago by Biostar ♦♦ 20
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Regarding Cnvkit analysis
cnvkit written 8 months ago by DL10 • updated 8 months ago by Eric T.2.3k
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CNVkit - how many normal samples do I need for the pooled normal reference?
genome cnvkit written 8 months ago by ibphuangchen10 • updated 8 months ago by Eric T.2.3k
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CNVKit - Gene labels in 'diagram'
cnvkit cnv calling written 8 months ago by asjannu0 • updated 8 months ago by Eric T.2.3k
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tumor/normal WGS with CNVkit has many small segments with small copy number changes
cnvkit cnv wgs written 8 months ago by swheelan10 • updated 8 months ago by Eric T.2.3k
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CNVKIT import errors
cnvkit python cnv linux written 8 months ago by alons260 • updated 8 months ago by Eric T.2.3k
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How to merge CNV of multiple samples from CNVkit
cnvkit cnv written 10 months ago by cc10 • updated 10 months ago by Eric T.2.3k
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cnvkit segmetrics on multiple files
cnvkit cnv written 11 months ago by adoak10
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Is cnvkit coverage output split into non-overlapping segments?
exome cnvkit coverage written 12 months ago by fbrundu260 • updated 11 months ago by Eric T.2.3k
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How to assess confidence of cnvkit calls
cnvkit cnv written 11 months ago by phusion0 • updated 11 months ago by Kevin Blighe30k
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CNVkit calling strategies with matched-normal tumor
cnvkit whole-exome copy-number-variation written 12 months ago by fbrundu260 • updated 12 months ago by Kevin Blighe30k
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How to import the output of CNVkit into GISTIC2.0 ?
cnvkit gistic2.0 written 13 months ago by Tonny20 • updated 13 months ago by Eric T.2.3k
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CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 13 months ago by merella.stefania10 • updated 13 months ago by Eric T.2.3k
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Error due to annotation file while running target module from CNVkit tool
exome cnvkit cnv sequencing written 13 months ago by arta540 • updated 13 months ago by Eric T.2.3k
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