Showing: cnvkitreset
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CNVkit: Dealing with noisy tumor samples
cnvkit written 10 days ago by Fil0 • updated 3 days ago by Eric T.2.3k
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CNVkit Heatmap samples clustering
cnvkit cnv clustering heatmap written 9 days ago by jim.paredes0 • updated 3 days ago by Eric T.2.3k
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Error in CNV Calling with Annotation
cnvkit written 5 days ago by wei.wei0 • updated 3 days ago by Eric T.2.3k
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Annotation tool for cnvKit
cnvkit cnvscan cnv written 12 weeks ago by carolina.naomi0 • updated 12 weeks ago by geocarvalho80
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How to deside gene CNVs from .cnr outputs
cnvkit written 3 months ago by guisongtao01040 • updated 12 weeks ago by nick90
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scatter plots with single chromosome gives IndexError
cnvkit bcbio written 7 months ago by fenrir.sivar0 • updated 4 months ago by Vijay Lakhujani3.6k
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cnvkit flasso interrupt
exome cnvkit written 5 months ago by gab20
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 3.0 years ago by alons270 • updated 5 months ago by RamRS20k
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Error : run cnvkit from bam
software error cnvkit written 5 months ago by reany0 • updated 5 months ago by finswimmer10k
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Running cnvkit batch with -y parameter
cnvkit next-gen copynumber sequencing written 5 months ago by alyza0 • updated 5 months ago by Eric T.2.3k
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Best variant caller for CNVkit
cnvkit written 6 months ago by milos-9110 • updated 6 months ago by Eric T.2.3k
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How to get the range of LOH?
cnvkit written 18 months ago by Tonny20 • updated 7 months ago by Shixiang30
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CNVkit: gene results not in output
cnvkit written 8 months ago by Lauren30 • updated 7 months ago by Eric T.2.3k
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minus integer copy number when using --purity for cnvkit
cnvkit written 8 months ago by xiaoqiaoliu0 • updated 8 months ago by Eric T.2.3k
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Using CNVkit to identify poor-quality normal samples
cnvkit written 9 months ago by Andy Lee10 • updated 9 months ago by Eric T.2.3k
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confused about how to run pipeline
cnvkit written 9 months ago by andrew.lamb0 • updated 9 months ago by toralmanvar750
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CNV details about the normal samples?
cnvkit cnv written 9 months ago by kvn95ss0 • updated 9 months ago by toralmanvar750
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Is there a way to use CNVkit without a reference from normal samples?
cnvkit sequence written 10 months ago by leandro.bispo.oliveira0 • updated 10 months ago by h.mon23k
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cnvkit example data
cnvkit bam cnv written 2.8 years ago by laxvid10 • updated 11 months ago by Biostar ♦♦ 20
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Regarding Cnvkit analysis
cnvkit written 12 months ago by DL10 • updated 12 months ago by Eric T.2.3k
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CNVkit - how many normal samples do I need for the pooled normal reference?
genome cnvkit written 12 months ago by ibphuangchen10 • updated 12 months ago by Eric T.2.3k
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CNVKit - Gene labels in 'diagram'
cnvkit cnv calling written 12 months ago by asjannu0 • updated 12 months ago by Eric T.2.3k
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tumor/normal WGS with CNVkit has many small segments with small copy number changes
cnvkit cnv wgs written 13 months ago by swheelan10 • updated 13 months ago by Eric T.2.3k
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CNVKIT import errors
cnvkit python cnv linux written 13 months ago by alons270 • updated 13 months ago by Eric T.2.3k
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How to merge CNV of multiple samples from CNVkit
cnvkit cnv written 14 months ago by cc10 • updated 14 months ago by Eric T.2.3k
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cnvkit segmetrics on multiple files
cnvkit cnv written 15 months ago by adoak10
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