Showing: cnvkitreset
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"Shifted" copy number ratios coming from cnvkit?
cnvkit somatic copy number written 13 days ago by gil.hornung30 • updated 13 days ago by markus.riester80
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Recurrent Segmentation Errors
cnvkit written 4 weeks ago by AndyW0
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Using THETA2 from CNVkit: what king of vcf do you need?
cnvkit tumor purity theta2 written 6 weeks ago by gil.hornung30 • updated 5 weeks ago by Eric T.1.7k
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CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 6 weeks ago by nina.naitatmane10 • updated 5 weeks ago by Eric T.1.7k
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How to add a legend to the heatmap?
cnvkit written 4 months ago by gil.hornung30
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Explications about call function of CNVkit
cnvkit call written 3 months ago by alice.choury50 • updated 3 months ago by Eric T.1.7k
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Error 1: NULL byte detected when trying to segment by PSCBS
exome cnvkit copy number segment written 3 months ago by nbay130 • updated 3 months ago by Eric T.1.7k
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CNVkit Segments vs Bins
exome cnvkit copy number segment written 3 months ago by murrayln10 • updated 3 months ago by Eric T.1.7k
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How is the "weight" calculated by CNVkit ?
cnvkit weight cnv written 3 months ago by alice.choury50 • updated 3 months ago by Eric T.1.7k
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How to export CNVkit results into PyClone?
cnvkit pyclone written 4 months ago by Jokhe40 • updated 4 months ago by Eric T.1.7k
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No call for exomes analysis
exome cnvkit written 4 months ago by alice.choury50 • updated 4 months ago by Eric T.1.7k
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Understanding coverage command
cnvkit written 5 months ago by deber19800 • updated 5 months ago by Eric T.1.7k
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Draw centromere on chromosome scatter plot
cnvkit plot cnv somatic written 5 months ago by alice.choury50 • updated 5 months ago by Eric T.1.7k
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CNVkit and Ion Torrent Data - Targeted Sequencing
ion torrent cnvkit cnv written 5 months ago by quantrum750 • updated 5 months ago by Eric T.1.7k
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cnvkit output understanding
cnvkit cnv written 5 months ago by runnerbio8850
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CNVkit : small CNV calling
cnvkit single-exon cnv written 7 months ago by alice.choury50 • updated 6 months ago by Eric T.1.7k
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Questions about creating my_antitargets.bed
cnvkit antitarget cnv capture written 8 months ago by alice.choury50 • updated 8 months ago by Eric T.1.7k
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Help on understanding CNVkit CN1/CN2
cnvkit written 8 months ago by phusion0
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cnvkit example data
cnvkit bam cnv written 13 months ago by laxvid10 • updated 10 months ago by Akliao0
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CNVkit: CSV error when testing installation
cnvkit written 11 months ago by opm0 • updated 11 months ago by Eric T.1.7k
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CNVkit: Overlapping Segments?
cnvkit written 12 months ago by fongchunchan10
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CNVkit - Proper Way to Generate Accurate Sex Chromosome Predictions
cnvkit written 13 months ago by fongchunchan10 • updated 13 months ago by Eric T.1.7k
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Interpretation of sex chromosome ploidy using CNVKit
cnvkit sex chromosome written 13 months ago by andcl930 • updated 13 months ago by 2nelly100
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Why do I get a weird copy number in the tumour?
cnvkit theta2 written 14 months ago by w.jaratlerdsiri10 • updated 13 months ago by hywg20
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CNVkit - Format of VCF file
cnvkit written 13 months ago by fongchunchan10 • updated 13 months ago by Eric T.1.7k
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