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<prev • 1,951 results • page 1 of 66 • next >
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Deconvolution Method in Seurat and convert from SingleCellExperiment
R chip-seq seurat single cell rna-seq written 9 hours ago by hamza_karakurt • 0
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315
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5 follow
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Ideas to split peaks into subpeaks - beyond PeakSplitter
peak calling wig chip-seq written 7 months ago by Sergio Martínez Cuesta • 60 • updated 2 days ago by Biostar ♦♦ 20
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Normalizing ChIP-seq Data To Spike-In Control
normalization spike-in chip-seq genomics written 2 days ago by megannj • 10
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find overlapping Chip-seq peaks and return outerboundries
overlap chip-seq written 7 days ago by m.wekking • 0 • updated 4 days ago by ATpoint ♦ 11k
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Could I call peaks without input control for histone modification's data?
chip-seq written 8 weeks ago by treywea • 0 • updated 4 days ago by Biostar ♦♦ 20
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Integration of Chip-seq and RNA-Seq data
next-gen chip-seq rna-seq written 9 days ago by anu014 • 160
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Taking scores from DiffBind for other analysis?
diffbind chip-seq written 9 days ago by Roman Hillje • 30
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107
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MACS2 won't build model - too few paired peaks, but I'm not using paired data
chip-seq written 10 days ago by bertb • 0
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Handling Dex read density increase in ChIP-Seq data
ngs chip-seq statistics written 11 days ago by dnamonk • 10
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Job: Postdoc & Scientist (New York City): Long Read Sequencing and Epigenomics
next-gen chip-seq job rna-seq written 11 weeks ago by fanggang • 60
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Tool: New ultraperformant version of SICER/epic: epic2
chip-seq tool written 14 days ago by endrebak852 • 90
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Using FeatureCounts for ChIP-seq normalised files?
deeptools chip-seq written 17 days ago by a.rex • 170 • updated 17 days ago by Devon Ryan ♦ 86k
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How to compare gene sequences between species to examine functional differences using motif analysis?
genome gene alignment chip-seq written 17 days ago by luckilyduck • 0
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105
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bowtie2-align exited with value 139 ?
software error bowtie2 alignment chip-seq rna-seq written 18 days ago by star • 70
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Extracting sample ID and their genotypes
next-gen chip-seq snp written 19 days ago by siyavash_damdar • 20 • updated 19 days ago by paolo002 • 100
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100
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Chrom3d Bead color
chip-seq written 22 days ago by dimitrischat • 50
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105
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1
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Getting hints on protein function by correlating its ChIP-seq peaks with public datasets?
encode data mining chip-seq correlation written 22 days ago by bsksln • 0
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How to extract mapping features of multiple samples in one output?
bowtie2 chip-seq mapping multiqc rna-seq written 23 days ago by star • 70 • updated 23 days ago by h.mon ♦ 21k
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Plot lines color change in plotAvgProf2 [ChIPseeker]
R chip-seq chipseeker written 4 weeks ago by anu014 • 160 • updated 23 days ago by zx8754 ♦ 6.1k
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Adapter Dimer Contamination Irregularities Between Multiplexed Samples [Chip-Seq/Rna-Seq]
illumina chip-seq rna-seq hiseq written 6.4 years ago by Sukhdeep Singh ♦ 9.5k • updated 23 days ago by qliu • 0
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Performing differential binding analyses between ChIP samples using Deeptools (SES method normalization)
chip-seq written 23 days ago by a.rex • 170
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MACS usage for IgG and treatment
macs normalization chip-seq written 4.0 years ago by TriS • 3.5k • updated 26 days ago by Biostar ♦♦ 20
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News: Genomic bioinformatics service provider
next-gen genome news chip-seq sequencing rna-seq written 27 days ago by Neha • 0 • updated 27 days ago by Vijay Lakhujani ♦ 3.4k
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Advice on Normalizing Baseline from NGS.Plot.R
R chip-seq written 28 days ago by landrjos • 10
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110
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Effective Genome Size for Masked MM9 36 bp reads
genome chip-seq written 28 days ago by landrjos • 10
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Basic understanding of ChiA-Pet analysis
epigenetics chip-seq chia-pet analysis written 2.4 years ago by Kritika • 260 • updated 28 days ago by Biostar ♦♦ 20
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Job: Cancer Biology Bioinformaticist
next-gen chip-seq job rna-seq sequencing written 9 weeks ago by joshuajmeeks • 10 • updated 4 weeks ago by reui879 • 0
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116
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Software to visualize ChIP-seq peak file
chip-seq visualization written 4 weeks ago by afli • 140
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107
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Chip-seq data of bivalent regions in hESC
stem cells chip-seq hesc written 4 weeks ago by g.e.novakovsky • 20 • updated 4 weeks ago by EagleEye ♦ 6.0k
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Using microarray re-annotation to combine array and Chip-Seq data
chip-seq microarray affymetrix re-annotation written 4 weeks ago by 2323982403 • 0
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