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33
votes
10
answers
13k
views
13 follow
10
answers
Which Chip Seq Peak Callers Do You Use?
chip-seq peak-calling written 10.1 years ago by Stew1.4k • updated 3.2 years ago by macmath140
113
votes
9
answers
29k
views
72 follow
9
answers
Forum: Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
homer deeptools forum chip-seq ngsplot visualization written 4.2 years ago by Sinji3.0k • updated 5 months ago by Ömer An200
8
votes
9
answers
4.6k
views
9
answers
ChIP-Seq TSS Line Plot
chip-seq written 3.7 years ago by Seigfried70 • updated 2.5 years ago by Simply Bioinformatics170
27
votes
7
answers
13k
views
7
answers
venndiagram for 6 sets
R next-gen chip-seq statistics written 4.2 years ago by mary9980 • updated 18 months ago by lieven.sterck7.8k
14
votes
7
answers
3.4k
views
7
answers
How can I save the output from samtools and awk as a bam file?
chip-seq written 3.8 years ago by GK161080 • updated 2.1 years ago by genomax83k
25
votes
6
answers
9.3k
views
11 follow
6
answers
Tools For Chipseq Scale Motif Finding?
motif chip-seq written 10.1 years ago by Cassj1.3k • updated 10.1 years ago by Jacques Van Helden10
21
votes
6
answers
8.1k
views
10 follow
6
answers
Chip Seq Data Analysis
galaxy chip-seq written 9.1 years ago by Dataminer2.7k • updated 6.4 years ago by bede.portz490
43
votes
6
answers
20k
views
24 follow
6
answers
How To Do Normalization Of Two Chip-Seq Data?
bioinformatics chip-seq written 8.1 years ago by yatung200 • updated 5.5 years ago by ritarebollo70
9
votes
6
answers
6.6k
views
9 follow
6
answers
Best Tools For Motif Finding And/Or De Novo Motif Discovery?
chip-seq motif genomics written 7.9 years ago by enricoferrero800 • updated 5.6 years ago by sascha-ott10
28
votes
6
answers
7.5k
views
9 follow
6
answers
How To Make Intervals In A Range Of Numbers?
perl python chip-seq awk written 7.5 years ago by daniel.soronellas330 • updated 7.5 years ago by Aaronquinlan11k
19
votes
6
answers
13k
views
14 follow
6
answers
Output Of Chip-Seq Data Analysis Using Macs
macs chip-seq written 7.4 years ago by Vikas Bansal2.4k • updated 5.4 years ago by muhe198520
14
votes
6
answers
10k
views
14 follow
6
answers
Plotting Reads Around Tss
chip-seq written 6.6 years ago by ChIP570 • updated 5.0 years ago by Ram130
31
votes
6
answers
9.9k
views
17 follow
6
answers
How To Randomly Sample A Subset Of Lines From A Bed File
bed chip-seq written 6.6 years ago by bede.portz490 • updated 10 months ago by ATpoint34k
14
votes
6
answers
4.0k
views
11 follow
6
answers
Drawing ChIPseq graphics
chip-seq plots written 5.8 years ago by NHEJ320 • updated 5.8 years ago by Ming Tang2.6k
4
votes
6
answers
11k
views
6
answers
47
votes
6
answers
11k
views
39 follow
6
answers
9
votes
6
answers
2.4k
views
6
answers
16
votes
6
answers
5.8k
views
6
answers
Large-scale open-source bioinformatics datasets
next-gen chip-seq rna-seq written 4.7 years ago by Tobias140 • updated 3.0 years ago by Samuel Lampa1.2k
3
votes
6
answers
2.0k
views
6
answers
Gene Ontology without enrichment analysis
next-gen chip-seq rna-seq written 4.2 years ago by biostart340 • updated 5 months ago by yairgatt10
8
votes
6
answers
1.7k
views
6 follow
6
answers
1
vote
6
answers
1.1k
views
5 follow
6
answers
27
votes
5
answers
7.6k
views
7 follow
5
answers
Chip Databases?
database chip-seq written 9.4 years ago by Dejian1.3k • updated 5.0 years ago by marcomendozabpn0
22
votes
5
answers
6.5k
views
6 follow
5
answers
Peaks And Nearby Genes
chip-seq written 9.0 years ago by Dataminer2.7k • updated 3.0 years ago by Praneet Chaturvedi110
21
votes
5
answers
9.2k
views
12 follow
5
answers
13
votes
5
answers
3.4k
views
6 follow
5
answers
Cg Contents In Chip-Seq Reads
gc chip-seq written 9.0 years ago by Jim70 • updated 9.0 years ago by James M. Ward50
8
votes
5
answers
8.3k
views
7 follow
5
answers
Quantification And Comparison Of Chip-Seq Peaks
differential chip-seq written 8.8 years ago by Ying W4.0k • updated 6.4 years ago by dnaseiseq210
12
votes
5
answers
16k
views
7 follow
5
answers
Find Out The Genes That Correspond To My Coordinates
chip-seq exon peak-calling intron written 7.9 years ago by e.karasmani120 • updated 7.9 years ago by Ian5.6k
9
votes
5
answers
9.2k
views
10 follow
5
answers
Correlation Coefficient Between Chip-Seq Replicates
chip-seq correlation written 7.8 years ago by Shumon110 • updated 6.1 years ago by dnaseiseq210
13
votes
5
answers
13k
views
13 follow
5
answers
Software To Find Overlaps Of Chip-Seq Peaks In Multiple Samples.
seq chip-seq written 7.6 years ago by pmoney180 • updated 7.6 years ago by Mikael Huss4.7k
17
votes
5
answers
6.6k
views
10 follow
5
answers
Differential Peaks Between Replicates
chip-seq written 7.2 years ago by Dataminer2.7k • updated 2.1 years ago by Biostar ♦♦ 20
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