Showing: chip-seqreset
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99
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Forum: Visualization of ChIP-seq data using Heatmaps (Updated: 06/10/16)
homer deeptools forum chip-seq ngsplot visualization written 2.8 years ago by Sinji2.7k • updated 11 months ago by chiefcat70
44
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6
answers
9.1k
views
35 follow
6
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44
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0
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30k
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27 follow
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Tutorial: Visualizing Chip-Seq Data Using Ucsc [Bigwig]
chip-seq tutorial bigwig visualization rna-seq ucsc written 6.7 years ago by Sukhdeep Singh9.5k • updated 2.9 years ago by Shicheng Guo7.3k
39
votes
6
answers
17k
views
20 follow
6
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How To Do Normalization Of Two Chip-Seq Data?
bioinformatics chip-seq written 6.7 years ago by yatung180 • updated 4.1 years ago by ritarebollo60
29
votes
4
answers
7.2k
views
19 follow
4
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ChIP-Seq: Calling peaks with replicates
replicates peak calling chip-seq written 4.3 years ago by dariober9.8k • updated 4.2 years ago by Michele Busby1.9k
38
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2
answers
26k
views
18 follow
2
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What Control For Chip-Seq: Input, Igg Or Untagged Strain?
chip-seq written 7.0 years ago by Olbzn170 • updated 7.0 years ago by Ying W3.9k
21
votes
4
answers
4.5k
views
16 follow
4
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P Value Or Statistical Significance Of Real Peak Compared To Random Peak Overlaps
chip-seq written 5.8 years ago by biorepine1.4k • updated 2.1 years ago by i.sudbery2.8k
30
votes
5
answers
8.0k
views
16 follow
5
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How To Randomly Sample A Subset Of Lines From A Bed File
bed chip-seq written 5.1 years ago by bede.portz470 • updated 4.5 years ago by monique.sakalidis0
32
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3
answers
13k
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15 follow
3
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How Do You Calculate If Two Sets Of Genomic Regions Overlap Significantly?
bed chip-seq coverage statistics written 7.9 years ago by Stew1.4k • updated 7 months ago by Hmd10
14
votes
6
answers
8.9k
views
14 follow
6
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Plotting Reads Around Tss
chip-seq written 5.2 years ago by ChIP490 • updated 3.5 years ago by Ram130
33
votes
10
answers
11k
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13 follow
10
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Which Chip Seq Peak Callers Do You Use?
chip-seq peak-calling written 8.7 years ago by Stew1.4k • updated 21 months ago by macmath130
13
votes
5
answers
11k
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13 follow
5
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Software To Find Overlaps Of Chip-Seq Peaks In Multiple Samples.
seq chip-seq written 6.1 years ago by pmoney180 • updated 6.1 years ago by Mikael Huss4.6k
27
votes
3
answers
5.4k
views
13 follow
3
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How Do You Decide When A Sequencing Run Is Too Bad To Have Reliable Information?
chip-seq written 5.6 years ago by KCC3.9k • updated 4.9 years ago by Biostar ♦♦ 20
32
votes
3
answers
8.0k
views
12 follow
3
answers
32
votes
4
answers
7.4k
views
12 follow
4
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How To Assign A Chip-Chip/Chip-Seq Peak To A Target Gene?
papers chip-seq target written 7.9 years ago by Casey Bergman17k • updated 7.9 years ago by 2184687-1231-83-4.9k
21
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5
answers
8.3k
views
12 follow
5
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25
votes
6
answers
8.5k
views
11 follow
6
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Tools For Chipseq Scale Motif Finding?
motif chip-seq written 8.7 years ago by Cassj1.3k • updated 8.7 years ago by Jacques Van Helden10
17
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4
answers
10.0k
views
11 follow
4
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How To Combine Multiple Wig/Bigwig Files Into One
wiggle format chip-seq conversion ucsc written 8.0 years ago by Yuan40 • updated 8.0 years ago by Anders Haakonsson60
14
votes
6
answers
3.0k
views
11 follow
6
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Drawing ChIPseq graphics
chip-seq plots written 4.4 years ago by NHEJ300 • updated 4.3 years ago by Ming Tang2.4k
17
votes
4
answers
2.3k
views
11 follow
4
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Visualization for ChIP-seq analysis
differential analysis motif detection chip-seq written 14 months ago by nvucic20 • updated 14 months ago by simon.vanheeringen170
21
votes
6
answers
7.6k
views
10 follow
6
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Chip Seq Data Analysis
galaxy chip-seq written 7.7 years ago by Dataminer2.5k • updated 5.0 years ago by bede.portz470
23
votes
3
answers
3.7k
views
10 follow
3
answers
A General Evaluation Of Chipseq Data
quality chip-seq written 6.8 years ago by Hamilton260 • updated 3.8 years ago by Biostar ♦♦ 20
14
votes
4
answers
4.5k
views
10 follow
4
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Constructing An Heatmap Of "Distance Of Binding Region Relative To Tss"
next-gen chip-seq written 6.5 years ago by Dataminer2.5k • updated 6.5 years ago by Leonor Palmeira3.6k
13
votes
2
answers
5.9k
views
10 follow
2
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Peak Finding Of Chip-Seq (Or Clip-Seq) And Poisson Distribution, Am I Right?
chip-seq written 5.8 years ago by Puriney330 • updated 5.8 years ago by KCC3.9k
15
votes
3
answers
703
views
10 follow
3
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Forum: Airport.bio: First class ticket to any biological database in the world
forum chip-seq rna-seq snp written 8 months ago by Bohdan Khomtchouk320 • updated 8 months ago by Alex Reynolds26k
18
votes
4
answers
3.6k
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9 follow
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How About Starting A Tutorial For Chip Seq Data Analysis?
next-gen chip-seq sequencing written 7.5 years ago by Dataminer2.5k • updated 3.7 years ago by Nowlan Freese820
14
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3
answers
4.7k
views
9 follow
3
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Generating Mappability Files
chip-seq written 7.1 years ago by Ying W3.9k • updated 22 months ago by inesdesantiago150
14
votes
3
answers
6.8k
views
9 follow
3
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Correlation For Chip-Seq Data In R -Input Data Format
correlation chip-seq heatmap written 6.8 years ago by Bcw60 • updated 3.8 years ago by inesdesantiago150
9
votes
1
answer
8.8k
views
9 follow
1
answer
Plotting Read Density/ Distribution/ Composite Profiles [Chip-Seq]
R ngs chip-seq written 6.5 years ago by Sukhdeep Singh9.5k • updated 4.6 years ago by kanwarjag910
9
votes
6
answers
5.6k
views
9 follow
6
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Best Tools For Motif Finding And/Or De Novo Motif Discovery?
chip-seq motif genomics written 6.4 years ago by enricoferrero750 • updated 4.2 years ago by sascha-ott10
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