Limit : this month
all time today this week this month this year
12 results • Page 1 of 1
Sort: Rank
Rank Views Votes Replies
3
votes
3
replies
93
views
Forum: Ideal PC configurations and operating system for bioinformatics laboratory
PC
updated 3 hours ago by 141k • written 3 hours ago by • 0
0
votes
0
replies
83
views
Forum: Improvement on automatic annotation of single-cell RNA-seq data from the literature using LLM
annotation scRNA llm
16 hours ago by yxwucq • 0
4
votes
2
replies
270
views
Forum: Bioinformatics: Where do I start
Sequencing
updated 7 days ago by 43k • written 7 days ago by ▴ 10
7
votes
7
replies
1.0k
views
Forum: Bioinformatician who was retaliated against after reporting discriminatory harassment - Please help me navigate getting out of the situation I'm in
Career advice
updated 8 days ago by ★ 2.5k • written 8 days ago by • 0
1
vote
2
replies
327
views
Forum: VCF bulk handling
bcftools SnpEff WGS VEP VCF
6 days ago by Javier • 0
16
votes
10
replies
1.0k
views
6 follow
Forum: F*up Night style events for Bioinformatics ? Comment if you're interested!
mistakes
updated 25 days ago by 5.3k • written 26 days ago by ★ 2.4k
1
vote
1
reply
211
views
Forum: Can I use this community for software development?
software-development
updated 29 days ago by 43k • written 29 days ago by • 0
5
votes
2
replies
376
views
Forum: Can questions and answers on biostars be asked only in English? Can't I use Russian for example?
language
updated 29 days ago by 54k • written 29 days ago by • 0
103
votes
42
replies
31k
views
34 follow
Forum: List of cloud genomics companies
cloud-genomics
updated 15 days ago by 22k • written 10.4 years ago by ★ 3.6k
12
votes
7
replies
7.0k
views
Forum: Differences between SMART-seq2, SMART-seq3, and 10x
cell smartseq UMIs single 10x
updated 29 days ago by ★ 5.8k • written 2.6 years ago by ▴ 70
12
votes
14
replies
2.4k
views
8 follow
Forum: Recovering bam files after unknown deletion in the storage
photorec bam sequencing
written 4.9 years ago by ▴ 70
25
votes
11
replies
3.7k
views
6 follow
Forum: Site Use Guidelines
meta biostars Guidelines
updated 2 hours ago by 43k • written 14.6 years ago by 100k
12 results • Page 1 of 1
Recent Votes
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
C: Threshold over percentage identity in blastn
A: Threshold over percentage identity in blastn
The Biostar Herald for Tuesday, April 23, 2024
Answer: Including plasmid in transcriptome assemblies
Comment: Ideal PC configurations and operating system for bioinformatics laboratory
RNA-seq power estimation using ssizeRNA program
Recent Locations • All
United States, just now
United States, just now
Botswana, just now
Moscow, 1 minute ago
United States, 1 minute ago
Brazil, 1 minute ago
United States, 1 minute ago
Recent Awards • All
Popular Question to v.berriosfarias ▴ 140
Popular Question to AdviceSeeker • 0
Great Question to Ann ★ 2.4k
Scholar to marco.barr ▴ 80
Popular Question to Kash ▴ 110
Scholar to GenoMax 141k
Scholar to anovak ▴ 120
Recent Replies
Comment: TCGA2STAT Error: Firehose connection by Ram 43k
If their github repo is alive, raise an issue there.
Comment: TCGA2STAT Error: Firehose connection by Ngrin • 0
Yeah makes sense. I was following their github. Thanks for pointing this out.
Comment: The Biostar Herald for Tuesday, April 23, 2024 by Pierre Lindenbaum 161k
bwa 0.7.18 released ! https://github.com/lh3/bwa/releases/tag/v0.7.18
Comment: Downsampling fastq file by Ram 43k
I'm moving this to a comment for now.
Answer: Seurat merge and batch correction by bk11 ★ 2.3k
You can merge your seven Seurat objects and perform integration using **Seurat V5** to remove the batch effect- ```r library(Seurat) libra…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by atowns21 • 0
Yeah, I've been digging around the web for a while now. Can't find any information about the barcodes. The total number of combinations is …
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by GenoMax 141k
Ah I see that in now. I am not sure why MGI has split the whitelist into two sections. You may need to see if you can dig up some info abou…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by atowns21 • 0
read 1 is 30bp... which I think you meant to type. If you scroll approximately halfway down the json file I linked to, it has the following…
Comment: TCGA2STAT Error: Firehose connection by Ram 43k
The package has been removed from CRAN and BioConductor. Should you even be using it?
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by GenoMax 141k
The barcodes are in location 1-10 and you have the actual list there. I don't know for certain what is in position 11-20 (perhaps spacer, c…
Answer: Including plasmid in transcriptome assemblies by GenoMax 141k
> I want to use both STAR and BOWTIE2 for assembly Those programs are aligners not assemblers. But since you are working with bacteria yo…
Comment: How to slice a gvcf file with tabix? by Sd • 0
I already have gvcfs called by chromosome and there are 24 gvcfs per sample which I merged them into a single gvcf per sample. Now I want …
Comment: Find subcluster under a cluster, find differential genes in one cluster between by bk11 ★ 2.3k
First, could you please explain any reason for not using Seurat V5 approach for your data integration mentioned in [here][1]? > Now moving…
Comment: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie by atowns21 • 0
So I'd take the json file located [here][1] and essentially create the whitelist to be all possible combinations of the position 1-10 barco…
Comment: TCGA2STAT Error: Firehose connection by Ngrin • 0
Hey Gnana, could you find a way to solve the issue? I have the same error
Traffic: 2576 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6