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822 results • Page 1 of 17
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1.2k
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205
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48k
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107 follow
Forum: What Are The Most Common Stupid Mistakes In Bioinformatics?
software
updated 8 weeks ago by ▴ 250 • written 12.0 years ago by 21k
61
votes
70
replies
11k
views
21 follow
Forum: Biostar 2.0 released
meta biostars
updated 5 weeks ago by 38k • written 8.9 years ago by 96k
279
votes
69
replies
18k
views
23 follow
Forum: Is Bioinformatics On Decline? Only In The Web, Or Also Within Institutions?
subjective
updated 4 weeks ago by 38k • written 11.6 years ago by ▴ 160
306
votes
65
replies
19k
views
48 follow
Forum: Your Favorite Bioinformatics Blogs (March 2010)
subjective
updated 6 months ago by 84k • written 13.1 years ago by 27k
286
votes
64
replies
18k
views
44 follow
Forum: Bioinformatics "Cheat Sheet"
cheat sheet
updated 6 months ago by 84k • written 12.0 years ago by 22k
144
votes
62
replies
9.3k
views
23 follow
Forum: Is The Biostar Fading? (Updated For 2014)
meta biostars
updated 5 weeks ago by 38k • written 12.0 years ago by ★ 2.9k
206
votes
58
replies
38k
views
31 follow
Forum: Will Python Take The Place Of R?
r statistics python biopython
updated 24 days ago by 38k • written 9.8 years ago by 9.5k
361
votes
57
replies
59k
views
43 follow
Forum: Recommend Your Favorite Bioinformatics Books
books education
updated 6 months ago by 84k • written 13.0 years ago by 96k
145
votes
56
replies
7.3k
views
17 follow
Forum: Suggesting The Removal Of Post Closing
biostars
updated 5 weeks ago by 38k • written 10.0 years ago by 96k
290
votes
55
replies
14k
views
41 follow
Forum: What Do You Waste Your Time On
scripting
updated 6 weeks ago by 38k • written 9.9 years ago by 9.5k
93
votes
50
replies
14k
views
17 follow
Forum: Fda Sends A Warning Letter To 23Andme - Personal Genomics Service Marketing To Be Discontinued
personal-genomics 23andMe
updated 19 days ago by 38k • written 9.3 years ago by 96k
262
votes
48
replies
20k
views
37 follow
Forum: Bioinformatics courses, workshops or training
Workshop Training Courses
updated 22 days ago by ▴ 970 • written 7.9 years ago by ★ 4.2k
105
votes
46
replies
11k
views
13 follow
Forum: Why Does Biostar Cover Questions On Epigenetics, But Not Intelligent Design?
epigenetics
updated 20 days ago by 38k • written 9.6 years ago by ★ 1.1k
126
votes
44
replies
27k
views
16 follow
Forum: Trimming adapter sequences - is it necessary?
NGS adapter RNA-Seq
updated 11 days ago by 38k • written 6.5 years ago by ▴ 970
57
votes
43
replies
14k
views
8 follow
Forum: Best RNA-Seq aligner: A comparison of mapping tools
NGS alignment genome RNA-Seq sequence
updated 11 days ago by 38k • written 4.2 years ago by 9.9k
202
votes
41
replies
23k
views
20 follow
Forum: Genomics is not Special. Computational Biologists are reinventing the wheel for big data biology analysis
genomics cram gatk galaxy
updated 5 weeks ago by 38k • written 8.3 years ago by ★ 5.2k
136
votes
41
replies
20k
views
20 follow
Forum: Are We Rude/Do We Expect Too Much From People Asking Questions On This Forum?
meta
updated 24 days ago by 38k • written 9.8 years ago by ★ 1.6k
151
votes
39
replies
22k
views
20 follow
Forum: A Farewell To Bioinformatics
bioinformatics
updated 25 days ago by 38k • written 10.2 years ago by 3.0k
25
votes
39
replies
4.4k
views
8 follow
Forum: Bioinformatics Study Group
study-group
updated 21 days ago by 38k • written 9.7 years ago by ▴ 440
159
votes
38
replies
15k
views
22 follow
Forum: Crac: Funny And/Or Weird Names For Bioinformatics Tools
humor
updated 25 days ago by 38k • written 10.0 years ago by 96k
47
votes
37
replies
7.3k
views
12 follow
Forum: The Organisation Of Really Contrived Acronyms (Orca)
acronyms
updated 21 days ago by 38k • written 9.6 years ago by 2.3k
49
votes
36
replies
7.2k
views
11 follow
Forum: New features and bug fixes for Biostar to work on during Google Summer of Code
meta biostars gsoc
updated 5 weeks ago by 38k • written 8.9 years ago by ▴ 110
99
votes
36
replies
27k
views
32 follow
Forum: List of cloud genomics companies
cloud-genomics
updated 8 weeks ago by 21k • written 9.4 years ago by ★ 3.6k
251
votes
36
replies
30k
views
27 follow
Forum: How Do You Manage Your Files & Directories For Your Projects ?
file
updated 6 months ago by 84k • written 12.9 years ago by 153k
115
votes
35
replies
36k
views
20 follow
Forum: Snakemake vs. Nextflow: strengths and weaknesses
snakemake nextflow Forum
updated 10 days ago by ▴ 30 • written 5.8 years ago by ▴ 760
45
votes
35
replies
4.6k
views
12 follow
Forum: looking for a bioinformatics project to do during military rotation
military
updated 8 months ago by 38k • written 5.5 years ago by ▴ 60
116
votes
35
replies
7.0k
views
18 follow
Forum: Is Biostar Killing The Bioinformatics Core?
core biostars
updated 5 weeks ago by 38k • written 10.0 years ago by 21k
54
votes
34
replies
3.5k
views
13 follow
Forum: Should We Release Database Dumps Of All Questions On Biostar?
meta biostars
updated 5 weeks ago by 38k • written 12.3 years ago by 96k
80
votes
34
replies
3.9k
views
11 follow
Forum: Authorship issues- how to resolve?
authorship
updated 10 weeks ago by 38k • written 7.8 years ago by ▴ 520
82
votes
32
replies
6.4k
views
13 follow
Forum: Shall We Go Back To Stackexchange?
meta
updated 25 days ago by 38k • written 10.3 years ago by ★ 3.6k
88
votes
32
replies
8.2k
views
11 follow
Forum: Vintage / unconventional pictures for Bioinformatics
history picture
updated 12 months ago by 38k • written 8.4 years ago by 153k
28
votes
31
replies
4.7k
views
8 follow
Forum: Biostar Ads Are Now Live. Feedback And Comments Are Sought.
biostars
updated 5 weeks ago by 38k • written 9.8 years ago by 96k
116
votes
31
replies
35k
views
24 follow
Forum: Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 9 months ago by 38k • written 9.6 years ago by 11k
78
votes
31
replies
5.7k
views
14 follow
Forum: Do Bad Questions Even Exist?
biostars general education
updated 5 weeks ago by 38k • written 12.1 years ago by 10k
83
votes
30
replies
5.5k
views
18 follow
Forum: Optimal design for bioinformatics "lab" space?
design lab-space
updated 8 months ago by 38k • written 7.9 years ago by 18k
37
votes
30
replies
4.0k
views
7 follow
Forum: Spam In Rss Feeds
meta RSS
updated 25 days ago by 38k • written 10.1 years ago by 5.3k
64
votes
29
replies
14k
views
15 follow
Forum: Fundamentals Of Designing Biological Databases?
database
updated 5 weeks ago by 38k • written 12.4 years ago by ▴ 130
72
votes
28
replies
5.2k
views
10 follow
Forum: Bioinformatics commercial services as a risk factor for scientific misconduct
commercial-services ethics misconduct
updated 8 months ago by 38k • written 8.2 years ago by ▴ 90
60
votes
28
replies
7.2k
views
27 follow
Forum: Jim Robinson of the Integrative Genomics Viewer (IGV) uses this
uses-this
updated 11 days ago by 38k • written 8.5 years ago by 96k
294
votes
27
replies
41k
views
33 follow
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
RNA-Seq sequencing papers
updated 7 months ago by 38k • written 7.1 years ago by ★ 2.4k
65
votes
26
replies
18k
views
13 follow
Forum: Macosx For Bioinformatics?
linux
updated 19 days ago by 38k • written 9.3 years ago by 11k
15
votes
25
replies
1.8k
views
6 follow
Forum: How to get help on a question that has been buried?
meta biostars
updated 5 weeks ago by 38k • written 7.0 years ago by ▴ 690
17
votes
24
replies
1.6k
views
14 follow
Forum: Bioinformatics terms that might be confusing for beginners
glossary jargon
updated 5 weeks ago by 38k • written 4.5 years ago by ▴ 10
47
votes
24
replies
4.9k
views
15 follow
Forum: What's fascinating about Bioinformatics for potential students?
career msc
updated 3 months ago by 38k • written 5.4 years ago by 52k
40
votes
24
replies
2.1k
views
13 follow
Forum: What programming language do you use the most in your work? Which one do you like the best?
Programming Python R Scripting
updated 11 days ago by 38k • written 2.1 years ago by ▴ 80
12
votes
24
replies
4.9k
views
8 follow
Forum: Biostar 2.0, Second Beta, Help Us Test The New Site
biostars
updated 5 weeks ago by 38k • written 9.0 years ago by 96k
88
votes
24
replies
4.7k
views
10 follow
Forum: How To Be Helpful As A Biostar Moderator/Editor?
biostars
updated 5 weeks ago by 38k • written 10.1 years ago by 1.9k
34
votes
23
replies
4.6k
views
8 follow
Forum: Unbelievably rapid NGS analysis by Churchill
sequencing NGS churchill
11 months ago by Ram 38k
106
votes
23
replies
20k
views
16 follow
Forum: How Did You Learn Good Practice In Bioinformatics/Computational Biology?
bioinformatics
updated 18 days ago by 38k • written 9.1 years ago by ▴ 570
45
votes
23
replies
5.5k
views
6 follow
Forum: biostar.slack.com: Chat for the biostars community -- [ feel free to join ]
chat slack
updated 5 weeks ago by 38k • written 5.0 years ago by 103k
822 results • Page 1 of 17
Recent Votes
Answer: Extract Sub_Tree From Big Phylogeny
How to pair TCGA bam files with no properly paired reads?
How to pair TCGA bam files with no properly paired reads?
Answer: How to implement this two-stage one-to-many workflow using WDL?
Answer: How to implement this two-stage one-to-many workflow using WDL?
Answer: How to implement this two-stage one-to-many workflow using WDL?
Creating workflows with snakemake and conda
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Popular Question to TJay • 0
Scholar to GenoMax 126k
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Recent Replies
Comment: Plot heatmap using row_splitting but splitting should based on a column in data by TJay • 0
Any guidance to make annotation object?
Comment: Plot heatmap using row_splitting but splitting should based on a column in data by rpolicastro 11k
Instead of splitting your dataset you want to make an annotation object via `rowAnnotation` and then pass it to the `left_annotation` argum…
Comment: How can I determine the number of detected genes and detected transcripts/isofor by GenoMax 126k
If this is single cell data then this is likely because of the 3' end detection bias. In general you are also detecting less genes because …
Comment: gene filtering for agilent microarray using Limma by Di Wu • 0
Dear Prof. Kevin Blighe, many thanks for your quick reply. About the `correlation` value, I used the following code for getting the value. …
Comment: GATK GenotypeGVCFs explain by Pierre Lindenbaum 153k
https://gatk.broadinstitute.org/hc/en-us/articles/360035531852-Intervals-and-interval-lists
Comment: GATK GenotypeGVCFs explain by Sarah ▴ 30
thank you
Comment: GATK GenotypeGVCFs explain by raphael.B ▴ 270
It limits the operation to some genomic regions given as parameter
Comment: GATK GenotypeGVCFs explain by Sarah ▴ 30
what does the option L
Comment: GATK GenotypeGVCFs explain by Pierre Lindenbaum 153k
GenotypeGVCFs takes a set of GVCF files called with HaplotyperCaler and output a VCF file.
Answer: TCGA Methylation Data and Gene Mapping by Basti ★ 1.4k
CpGs may be annotated to more than >1 gene simply because gene regions overlap on the genome. If you want to associate each gene to a me…
Comment: Circos plot by Fabio Marroni ★ 3.0k
Please give a look to [this post][1] for increasing the probability to get an answer. If I may add some needed info: 1. What exactly do y…
Comment: Trying to install Roary with Conda results in error message by tobiwan ▴ 10
Wow, thank you so much for your explanation! My conda channel is indeed set to strict priority. Should packages with different dependencie…
Comment: FeatureCounts >edgeR > GO by Basti ★ 1.4k
You can use BioMart to convert your "gene-IDs" to gene symbols, but you need to specify from which database your gene identifiers come from
Comment: How to create GO Bar Plot using data obtained from DAVID Functional Enrichment A by Basti ★ 1.4k
If you search "DAVID dotplot" on this forum, you have many answers to your question. Note that you can also perform DAVID Functional Enrich…
Answer: How to implement this two-stage one-to-many workflow using WDL? by Pierre Lindenbaum 153k
nottested, something like: ``` version 1.0 workflow BIOSTAR { call FIRST { } scatter (F in FIRST.each_F)…
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