written 13.6 years ago by
Istvan Albert
98k
361
votes
58
replies
64k
views
44 follow
1.2k
votes
206
replies
52k
views
108 follow
updated 3 months ago by
Raony Guimarães
★
1.2k
•
written 12.5 years ago by
Jeremy Leipzig
21k
125
votes
46
replies
46k
views
21 follow
121
votes
35
replies
40k
views
20 follow
206
votes
58
replies
39k
views
31 follow
20
votes
12
replies
38k
views
7 follow
120
votes
33
replies
37k
views
24 follow
updated 4 months ago by
carlopecoraro2
★
2.3k
•
written 10.1 years ago by
Eric Normandeau
11k
12
votes
4
replies
37k
views
Forum:
BWA command guide
41
votes
17
replies
37k
views
15 follow
updated 7 months ago by
Ram
40k
•
written 10.6 years ago by
Malachi Griffith
19k
197
votes
27
replies
32k
views
20 follow
Forum:
Bioinformatics Cartoon
updated 11 weeks ago by
Ram
40k
•
written 11.7 years ago by
Maxime Lamontagne
★
2.3k
21
votes
3
replies
32k
views
Forum:
Did You Know That Researchgate Is Spamming Your Colleagues (Perhaps Without Your Explicit Consent)?
updated 7 months ago by
Ram
40k
•
written 10.6 years ago by
Obi Griffith
20k
251
votes
36
replies
32k
views
27 follow
updated 6 months ago by
Ram
40k
•
written 13.4 years ago by
Pierre Lindenbaum
157k
128
votes
44
replies
30k
views
16 follow
100
votes
38
replies
29k
views
34 follow
updated 27 days ago by
Jeremy Leipzig
21k
•
written 9.9 years ago by
14134125465346445
★
3.6k
57
votes
19
replies
27k
views
6 follow
updated 7 months ago by
Ram
40k
•
written 10.9 years ago by
David Langenberger
10k
203
votes
41
replies
24k
views
20 follow
151
votes
39
replies
23k
views
20 follow
Forum:
A Farewell To Bioinformatics
updated 7 months ago by
Ram
40k
•
written 10.7 years ago by
Martin A Hansen
3.0k
262
votes
48
replies
21k
views
37 follow
updated 7 months ago by
Lars
★
1.0k
•
written 8.4 years ago by
Deepak Tanwar
★
4.2k
106
votes
23
replies
21k
views
16 follow
138
votes
42
replies
21k
views
22 follow
91
votes
20
replies
19k
views
15 follow
279
votes
69
replies
19k
views
23 follow
65
votes
26
replies
18k
views
13 follow
Forum:
Macosx For Bioinformatics?
updated 6 months ago by
Ram
40k
•
written 9.8 years ago by
Eric Normandeau
11k
36
votes
21
replies
17k
views
9 follow
160
votes
22
replies
17k
views
19 follow
170
votes
43
replies
17k
views
25 follow
updated 5 months ago by
zx8754
11k
•
written 10.5 years ago by
Istvan Albert
98k
9
votes
9
replies
16k
views
6 follow
48
votes
38
replies
16k
views
8 follow
updated 5 months ago by
Ram
40k
•
written 7.5 years ago by
Eric Normandeau
11k
31
votes
13
replies
15k
views
8 follow
64
votes
29
replies
15k
views
15 follow
290
votes
55
replies
15k
views
41 follow
93
votes
50
replies
15k
views
17 follow
Forum:
Fda Sends A Warning Letter To 23Andme - Personal Genomics Service Marketing To Be Discontinued
updated 6 months ago by
Ram
40k
•
written 9.8 years ago by
Istvan Albert
98k
57
votes
43
replies
15k
views
8 follow
63
votes
11
replies
15k
views
9 follow
updated 7 months ago by
Ram
40k
•
written 10.2 years ago by
Malachi Griffith
19k
42
votes
21
replies
14k
views
10 follow
updated 6 months ago by
Ram
40k
•
written 9.6 years ago by
Giovanni M Dall'Olio
28k
19
votes
0
replies
14k
views
updated 6 months ago by
Ram
40k
•
written 9.0 years ago by
Istvan Albert
98k
6
votes
12
replies
13k
views
11 follow
updated 6 months ago by
Ram
40k
•
written 7.0 years ago by
ankur.ganveer
▴
20
20
votes
22
replies
13k
views
11 follow
Forum:
Nextseq for analysts
23
votes
6
replies
13k
views
updated 11 weeks ago by
Ram
40k
•
written 10.9 years ago by
veronicaschroeder78
▴
140
61
votes
70
replies
12k
views
21 follow
Forum:
Biostar 2.0 released
updated 7 months ago by
Ram
40k
•
written 9.5 years ago by
Istvan Albert
98k
105
votes
46
replies
12k
views
13 follow
updated 7 months ago by
Ram
40k
•
written 10.1 years ago by
ugly.betty77
★
1.1k
8
votes
2
replies
12k
views
updated 6 months ago by
Ram
40k
•
written 9.0 years ago by
JorgeGonzalez
▴
20
60
votes
14
replies
11k
views
16 follow
updated 7 months ago by
Ram
40k
•
written 6.5 years ago by
WouterDeCoster
47k
37
votes
21
replies
11k
views
10 follow
6
votes
5
replies
11k
views
12
votes
8
replies
11k
views
8 follow
32
votes
13
replies
10k
views
10 follow
15
votes
14
replies
10k
views
6 follow
updated 6 months ago by
Ram
40k
•
written 9.6 years ago by
kandoigaurav
▴
150
144
votes
62
replies
10k
views
23 follow
15
votes
6
replies
10k
views
updated 5 months ago by
Ram
40k
•
written 7.5 years ago by
Sukhi Singh
11k
Recent Votes
Recent Locations •
All
Tehran, 2 minutes ago
South Korea, 3 minutes ago
France, 8 minutes ago
United States, 12 minutes ago
UCLA, 13 minutes ago
China, 17 minutes ago
South Korea, 19 minutes ago
Recent Awards •
All
Scholar to
Mensur Dlakic
★
25k
Popular Question to
bharata1803
▴
550
Popular Question to
morovatunc
▴
550
Popular Question to
fi1d18
★
4.2k
Popular Question to
julianneradford
▴
20
Recent Replies
Comment: Low Alignment rate
by
dsull
★
4.7k
Wow! Didn't realize the repeat-masked file could have such a large influence on alignment. Very good to know -- I guess I'll need to dive i…
Comment: Troubles launch IGV on Linux(Debian)
by
morovatunc
▴
550
Disclaimer: My comment could be totally unrelated. I would give these a try if you have noone comment/answer your problem.
I have had this…
Comment: How to check RNAseq support for annotated genes?
by
Michael
53k
> I tried it using STAR to map the transcript to the annotation gtf file
That is not what STAR is for. STAR is for aligning short reads in…
Comment: Low Alignment rate
by
Mehwish
•
0
Thanks alot! This worked out for me https://ftp.ensembl.org/pub/release-110/fasta/homo_sapiens/dna/Homo_sapiens.GRCh38.dna.toplevel.fa.gz …
Comment: Violin plot (Monocle 3) - Troubleshooting
by
Ram
40k
The error message tells me there is the possibility of a conflicting function called `plot_genes_violin` that accepts one parameter and err…
Comment: Violin plot (Monocle 3) - Troubleshooting
by
bk11
★
1.2k
I m not sure why you have problem there. I do not encounter any problem. May be your gene list are not present in your source object. Pleas…
Comment: Violin plot (Monocle 3) - Troubleshooting
by
Ram
40k
What is the output to:
```r
help.search('plot_genes_violin', agrep=FALSE, ignore.case=FALSE, fields=c('name'))
lsf.str()
sessionInfo()
```
Comment: Violin plot (Monocle 3) - Troubleshooting
by
seattlescientist_01
•
0
I see the error message but I'm confused on what it's telling me.
Answer: Bacterial Pangenome Analysis
by
liorglic
★
1.2k
I am not sure I understand why you think there is a problem with your analysis. It makes perfect sense that different blastp cutoffs produc…
Comment: How to plot proportion of cells in each cluster with scanpy?
by
bioinfo
▴
110
Thank you for replying again. The "type" still causes issues but the reply by Radu Tanasa worked.
Comment: How to plot proportion of cells in each cluster with scanpy?
by
bioinfo
▴
110
Thank you so much. That worked perfectly and it was much faster than what I was trying.
Answer: How to plot proportion of cells in each cluster with scanpy?
by
Radu Tanasa
▴
60
Hi. If I get this right, you simply need to compute the percentage of cells in each cluster at the dataset level?
```py
import pandas as p…
Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool?
by
ATpoint
76k
Why would that be an advantage?
Comment: How to plot proportion of cells in each cluster with scanpy?
by
bk11
★
1.2k
The following code will write percentage in your stacked barplot.
cross_tab = pd.crosstab(adata.obs['leiden_0.6'],adata.obs['typ…
Comment: How to check RNAseq support for annotated genes?
by
BioinfoBee
•
0
@juke34 Thanks for the suggestion. I wonder if bedtool coverage or intersect can be used to check the transcript support or coverage for ea…
Traffic: 1407 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6