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1,000 results • Page
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Sort: Rank
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Votes
Replies
3
votes
6
replies
1.4k
views
6 follow
Forum:
Is Bioinformatics a Professional Degree?
career
degree
7 months ago by
anasjamshed
▴ 120
2
votes
5
replies
918
views
6 follow
Forum:
Biostar as a next generation version
meta
mobile-app
updated 5 months ago by
Ram
43k • written 7 months ago by
rj.rezwan
• 0
2
votes
9
replies
1.1k
views
Forum:
open source projects looking for contributors
open-source
updated 6 months ago by
vincenthus
▴ 70 • written 7 months ago by
claudiofr
▴ 20
0
votes
0
replies
519
views
Forum:
Recruiters: what do you expect on a junior bioinformatician?
career
skills
updated 7 months ago by
Ram
43k • written 7 months ago by
gallardodiazmiriam
▴ 20
3
votes
4
replies
1.3k
views
Forum:
Discussion: Uploading terabytes of data to NCBI SRA
NCBI
WGS
archiving
servers
remote
updated 7 months ago by
GenoMax
140k • written 7 months ago by
James Reeve
▴ 130
0
votes
0
replies
547
views
Forum:
I have a Master's and little experience in Bioinformatics - what would be the next best step?
career
updated 7 months ago by
Ram
43k • written 7 months ago by
RM123
▴ 10
1
vote
3
replies
733
views
Forum:
Spaceranger missing spatial coordinates [Discussion]
Visium
updated 7 months ago by
GenoMax
140k • written 7 months ago by
morovatunc
▴ 550
11
votes
8
replies
1.3k
views
6 follow
Forum:
How to write a review article in bioinformatics
article
review
updated 7 months ago by
Ram
43k • written 7 months ago by
joey
▴ 10
363
votes
58
replies
69k
views
44 follow
Forum:
Recommend Your Favorite Bioinformatics Books
education
books
updated 5 months ago by
Ram
43k • written 14.1 years ago by
Istvan Albert
100k
1
vote
2
replies
18k
views
Forum:
Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear
latent
batch-effect
variable
GLM
8 months ago by
LauferVA
4.1k
0
votes
3
replies
3.8k
views
10 follow
Forum:
Discussion question: Cutoff for SNP phylogeny
Phylogenetics
SNP
written 16 months ago by
SushiRoll
▴ 120
2
votes
3
replies
752
views
Forum:
Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 8 months ago by
GenoMax
140k • written 8 months ago by
LauferVA
4.1k
0
votes
2
replies
1.2k
views
Forum:
[Detailed Question] How to Normalize of Metagenomics Gene Abundances (with HMMs models)
normalization
updated 9 months ago by
Asaf
10k • written 9 months ago by
Davide
• 0
33
votes
23
replies
3.9k
views
8 follow
Forum:
Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF
file-format
genomics
updated 9 months ago by
Jeremy Leipzig
22k • written 9 months ago by
LauferVA
4.1k
7
votes
8
replies
1.8k
views
Forum:
Would solving many Rosalind problems show your ability for this field in job-wise?
rosalind
career
9 months ago by
K
• 0
2
votes
3
replies
814
views
Forum:
Mapping a predicted sequence to a genome
predicted
map
alignment
sequence
updated 9 months ago by
Mensur Dlakic
★ 26k • written 9 months ago by
Andy
• 0
0
votes
0
replies
425
views
Forum:
Recommendation sought for differential exon usage of a single gene
splicing
differential-exon-usage
updated 9 months ago by
Ram
43k • written 9 months ago by
nick_b55
▴ 10
7
votes
4
replies
1.1k
views
Forum:
[Meta] Use of AI
AI
Artificial-Intelligence
meta
ChatGPT
updated 9 months ago by
Ram
43k • written 9 months ago by
LauferVA
4.1k
2
votes
2
replies
565
views
Forum:
Colleges
Colleges
india
universities
updated 10 months ago by
Ram
43k • written 10 months ago by
mahimanepalli36
• 0
19
votes
15
replies
2.0k
views
6 follow
Forum:
Cross out line in Biostars
meta
updated 10 months ago by
Ram
43k • written 5.9 years ago by
Bastien Hervé
5.3k
120
votes
33
replies
39k
views
24 follow
Forum:
Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 10 months ago by
carlopecoraro2
★ 2.4k • written 10.6 years ago by
Eric Normandeau
11k
103
votes
42
replies
30k
views
34 follow
Forum:
List of cloud genomics companies
cloud-genomics
updated 20 days ago by
Jeremy Leipzig
22k • written 10.4 years ago by
14134125465346445
★ 3.6k
26
votes
12
replies
7.4k
views
6 follow
Forum:
Mapping God Found ‘Scientifically Dishonest’ By Anonymous Peer Reviewers
ngs
updated 10 months ago by
zyan2005
▴ 10 • written 10.4 years ago by
johnblue81
▴ 50
0
votes
2
replies
744
views
Forum:
How to start in bioinformatics?
career
updated 10 months ago by
Ram
43k • written 11 months ago by
caffrey
• 0
4
votes
5
replies
1.3k
views
Forum:
I'm looking for a mentor in Bioinformatics
mentor
teaching
updated 6 weeks ago by
alva
• 0 • written 11 months ago by
cwaingartentrabajo
• 0
12
votes
5
replies
1.9k
views
6 follow
Forum:
Bioinformatics opportunities in Europe?
career
updated 11 months ago by
alwayshope
▴ 40 • written 11 months ago by
melaniem
• 0
19
votes
14
replies
1.9k
views
7 follow
Forum:
What's the general view on point & click bioinformatics for routine analyses?
ngs
RNA-Seq
next-gen-sequencing
11 months ago by
Simon
▴ 40
0
votes
0
replies
7.0k
views
Forum:
Optimal approach for variant calling with 3 diluted germline sample in one sequencing - Capture Sequencing
germline
Calling
Variant
Capture
Sequencing
11 months ago by
Alexandre Eeckhoutte
• 0
11
votes
11
replies
1.7k
views
7 follow
Forum:
Any tips in landing a bioinformatic job?
Spain
R
updated 12 months ago by
LauferVA
4.1k • written 12 months ago by
Jorge
▴ 30
4
votes
2
replies
674
views
Forum:
advice on course selection for a bioinformatics career.
career
updated 12 months ago by
Istvan Albert
100k • written 12 months ago by
Aaron
• 0
0
votes
1
reply
517
views
Forum:
Graduate in molecular biology and genetics
biology
genetics
Molecular
updated 12 months ago by
GenoMax
140k • written 12 months ago by
zamzammahmud20
• 0
4
votes
1
reply
763
views
Forum:
Open problems in genomics 2023
genomics
pangenomics
updated 12 months ago by
GenoMax
140k • written 12 months ago by
colindaven
6.3k
5
votes
3
replies
876
views
Forum:
Someone posted the same question to StackOverflow and Biostars. The results will blow your mind.
meta
updated 12 months ago by
Joe
21k • written 12 months ago by
Cornelius
▴ 70
1
vote
0
replies
456
views
Forum:
Penetrance versus heritability
penetrance
heritability
12 months ago by
tacrolimus
▴ 140
10
votes
15
replies
2.0k
views
Forum:
How should reference genome fasta files be distributed by UCSC?
reference-genome
fasta
freeze
ucsc-genome-browser
updated 10 months ago by
Jeremy Leipzig
22k • written 13 months ago by
Maximilian Haeussler
★ 1.6k
8
votes
4
replies
935
views
Forum:
Implementing FAIR data principles to a bioinformatics lab
data
updated 13 months ago by
Jeremy Leipzig
22k • written 13 months ago by
pixie@bioinfo
★ 1.5k
0
votes
0
replies
443
views
Forum:
NGSrich - hg38
Coverage
NGSrich
13 months ago by
RK
• 0
5
votes
5
replies
2.0k
views
Forum:
Bioinformatics - how to start?
molecular-biology
updated 13 months ago by
Mensur Dlakic
★ 26k • written 13 months ago by
Abigail
• 0
8
votes
8
replies
1.7k
views
7 follow
Forum:
A Computer Scientist who wants to start Bioinformatics
computer-science
books
resources
ngs
updated 14 months ago by
omaridris5315
▴ 10 • written 15 months ago by
bjorn
• 0
7
votes
3
replies
1.0k
views
Forum:
Find a research paper for reproducing the results
research
paper
updated 14 months ago by
GenoMax
140k • written 14 months ago by
grant.hovhannisyan
★ 2.6k
1
vote
1
reply
766
views
Forum:
Gene ontology vs Gene set enrichment
set
enrichment
GSEA
ontology
Gene
analysis
gene
updated 15 months ago by
DareDevil
★ 4.3k • written 15 months ago by
Emmykyz
• 0
6
votes
12
replies
2.0k
views
Forum:
How to decide when to have local hardware vs cloud computing?
hardware
computational-resources
cloud
15 months ago by
Lluís R.
★ 1.2k
15
votes
11
replies
2.6k
views
7 follow
Forum:
BioStars and ChatGPT
ChatGPT
Meta
GPT
updated 11 months ago by
ponganta
▴ 590 • written 15 months ago by
Jack Tierney
▴ 350
18
votes
10
replies
2.4k
views
7 follow
Forum:
Add artificial intelligence training related disclaimers to your profile
licensing
AI
updated 15 months ago by
Michael
54k • written 16 months ago by
Istvan Albert
100k
7
votes
2
replies
849
views
Forum:
Improvement of Wikipedia articles with bioinformatic subjects
Wikipedia
Bioinformatics
14 months ago by
Matthias Zepper
4.5k
5
votes
4
replies
1.3k
views
Forum:
Best BAM viewer in 2022
sam
bam
updated 9 months ago by
Ram
43k • written 16 months ago by
Cornelius
▴ 70
1.2k
votes
206
replies
58k
views
108 follow
Forum:
What Are The Most Common Stupid Mistakes In Bioinformatics?
software
updated 10 months ago by
Raony Guimarães
★ 1.4k • written 13.0 years ago by
Jeremy Leipzig
22k
15
votes
13
replies
3.8k
views
8 follow
Forum:
Does a PhD or work experience set you up better to do bioinformatics work in industry?
advice
industry
phd
updated 10 weeks ago by
benformatics
3.9k • written 16 months ago by
buhbs
▴ 30
0
votes
2
replies
945
views
Forum:
Best Phd Programs in Usa ( Computational Biology)
computational-biology
drug-design
updated 15 months ago by
Ram
43k • written 18 months ago by
AleLs
• 0
4
votes
5
replies
1.3k
views
6 follow
Forum:
Which Bioinformatics Master's degree is better?
career
masters
updated 10 months ago by
Ram
43k • written 17 months ago by
stelakarayani7
• 0
1,000 results • Page
2 of 20
Recent Votes
Answer: log2(TPM+1)
Comment: Error in openning FastQC
Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
Answer: F*up Night style events for Bioinformatics ? Comment if you're interested!
Answer: F*up Night style events for Bioinformatics ? Comment if you're interested!
Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
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Recent Replies
Comment: Is it reasonable to discard reads that show variation of quality across its leng
by
BRENO
• 0
Yikes. Well, this is from an Illumina MiniSeq. Sure, I will use alignment, but only to remove host reads. Then the remaining reads will go …
Comment: Is it reasonable to discard reads that show variation of quality across its leng
by
GenoMax
140k
This is going to be tough to diagnose. Are you going to align to a reference? If so go ahead with the alignments to see if alignments turn …
Comment: Is it reasonable to discard reads that show variation of quality across its leng
by
BRENO
• 0
Thank you for replying. I have separated the reads with at least one N on them and they account for 0.2% of the total reads in the file (8'…
Comment: Error running local blastn in R using system2
by
Mensur Dlakic
★ 26k
The `-db data/nt_euk` switch means that in your current directory you have a subdirectory called `data`, and all the `nt_euk` files are in …
Comment: Low number of both surviving reads after trimming
by
Jay
• 0
Thank you for your opinion. I will try with lower LEADING and TRAILING bases. By the way, I tried to set `keepBothReads:true` through sear…
Comment: Error in openning FastQC
by
GenoMax
140k
At this point it would be beneficial to learn some of the basics of command line. Please use this UNIX tutorial since you seem to be new to…
Comment: vcf file: number of samples does not match number of columns
by
Pierre Lindenbaum
160k
> ore or have any suggestions for fixing it? it's a problem with your upstream process. You'd better fix it.
Comment: Error in openning FastQC
by
friszd
• 0
after running fastqc -o output.html input.fastq, terminal returns: " Specified output directory 'output.html' does not exist " , when i run…
Comment: Is it reasonable to discard reads that show variation of quality across its leng
by
GenoMax
140k
The question you should be looking into is why the Q scores are dropping there? Are there `N` calls indicating some issue with that cycle?
Comment: Error in openning FastQC
by
GenoMax
140k
What is `ctrl+c ctrl+v`? You may actually be killing the running fastqc process. If you run `fastqc` interactively (like what was shown ab…
Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
by
Dave Carlson
★ 1.7k
Ugh. I've definitely done this one before as well. And was none too happy about it.
Comment: Error in openning FastQC
by
friszd
• 0
fastqc -o output.html input.fastq ctrl+c ctrl+v
Comment: Error running local blastn in R using system2
by
GenoMax
140k
What do you see if you `cat nt_euk.nal`? Do the number of pieces mentioned in that file match with what you locally have?
Comment: Low number of both surviving reads after trimming
by
GenoMax
140k
It is your data and if you want to do that it is up to you. You may be throwing away essentially good data (you should remove the nextera s…
Comment: F*up Night style events for Bioinformatics ? Comment if you're interested!
by
Istvan Albert
100k
Some things never change ... the most common mistake is still the one on top there
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