Limit : all time
all time today this week this month this year
1,000 results • Page 2 of 20
Sort: replies
Rank Views Votes Replies
88
votes
32
replies
9.5k
views
11 follow
Forum: Vintage / unconventional pictures for Bioinformatics
history picture
updated 2.1 years ago by 43k • written 9.5 years ago by 161k
82
votes
32
replies
7.7k
views
13 follow
Forum: Shall We Go Back To Stackexchange?
meta
updated 13 months ago by 43k • written 11.4 years ago by ★ 3.6k
38
votes
31
replies
2.8k
views
10 follow
Forum: To the Biologists out there: What bioinf tool are you missing?
education career
updated 12 months ago by 43k • written 7.7 years ago by ▴ 180
28
votes
31
replies
5.7k
views
8 follow
Forum: Biostar Ads Are Now Live. Feedback And Comments Are Sought.
biostars
updated 14 months ago by 43k • written 10.9 years ago by 100k
78
votes
31
replies
6.8k
views
14 follow
Forum: Do Bad Questions Even Exist?
biostars general education
updated 14 months ago by 43k • written 13.1 years ago by 10k
30
votes
31
replies
3.7k
views
11 follow
Forum: I need your help to find my future
internship masters career
updated 12 months ago by 43k • written 7.7 years ago by ▴ 90
83
votes
30
replies
6.7k
views
18 follow
Forum: Optimal design for bioinformatics "lab" space?
design lab-space
updated 21 months ago by 43k • written 9.0 years ago by 18k
37
votes
30
replies
5.0k
views
7 follow
Forum: Spam In Rss Feeds
meta RSS
updated 13 months ago by 43k • written 11.2 years ago by 5.3k
47
votes
30
replies
4.3k
views
10 follow
Forum: Bioinformatics software distribution
software
updated 11 months ago by 43k • written 7.1 years ago by ★ 2.8k
86
votes
29
replies
9.9k
views
9 follow
Forum: What is the future of EMBL-EBI (and European bioinformatics in general) in case of a 'Brexit'?
EU brexit EBI politics
updated 12 months ago by 43k • written 7.9 years ago by 54k
66
votes
29
replies
16k
views
15 follow
Forum: Fundamentals Of Designing Biological Databases?
database
updated 14 months ago by 43k • written 13.4 years ago by ▴ 130
60
votes
28
replies
8.3k
views
27 follow
Forum: Jim Robinson of the Integrative Genomics Viewer (IGV) uses this
uses-this
updated 13 months ago by 43k • written 9.5 years ago by 100k
63
votes
28
replies
4.0k
views
11 follow
Forum: Bioinformatics analyses & errors: need for better post-publication tools?
next-gen RNA-Seq
updated 12 months ago by 43k • written 7.9 years ago by ★ 1.2k
72
votes
28
replies
6.2k
views
10 follow
Forum: Bioinformatics commercial services as a risk factor for scientific misconduct
commercial-services ethics misconduct
updated 21 months ago by 43k • written 9.2 years ago by ▴ 90
41
votes
27
replies
5.9k
views
8 follow
Forum: Why bioinformaticians need to know programming languages?
Python R Programming
updated 11 months ago by 43k • written 6.9 years ago by ▴ 90
26
votes
27
replies
2.0k
views
10 follow
Forum: Determining computer time required
computer hpc time
updated 3 months ago by ★ 5.8k • written 3 months ago by ▴ 40
3
votes
27
replies
2.5k
views
7 follow
Forum: What server do you use?
HPC AWS
updated 10 months ago by 43k • written 5.8 years ago by ★ 1.9k
298
votes
27
replies
45k
views
33 follow
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
RNA-Seq sequencing papers
updated 20 months ago by 43k • written 8.2 years ago by ★ 2.4k
65
votes
27
replies
7.4k
views
14 follow
Forum: What is the reason for most software errors in Bioinformatics according to you?
software-error blast sequencing SNP R
updated 12 months ago by 43k • written 8.1 years ago by ▴ 110
197
votes
27
replies
34k
views
20 follow
Forum: Bioinformatics Cartoon
bioinformatics
updated 9 months ago by 43k • written 12.3 years ago by ★ 2.3k
49
votes
27
replies
7.3k
views
10 follow
Forum: Possible augmented reality tools for bioinformatics and current problems
visualization 3D augmented-reality
updated 12 months ago by 43k • written 8.5 years ago by ▴ 90
30
votes
27
replies
2.6k
views
11 follow
Forum: How do you spend your time (productively) when your script is running?
time-management
updated 12 months ago by 43k • written 7.2 years ago by 7.1k
33
votes
26
replies
3.6k
views
7 follow
Forum: Poll: How many people have PyPy?
pypy python
updated 12 months ago by 43k • written 8.1 years ago by 13k
65
votes
26
replies
19k
views
13 follow
Forum: Macosx For Bioinformatics?
linux
updated 13 months ago by 43k • written 10.4 years ago by 11k
24
votes
26
replies
2.1k
views
6 follow
Forum: Organizing a Bioinformatics Conference ?
meeting conference
updated 11 months ago by 43k • written 6.4 years ago by 161k
39
votes
25
replies
4.4k
views
9 follow
Forum: Making a mac book Bioinfo ready (El Capitan)
mac software-installation
updated 12 months ago by 43k • written 8.1 years ago by 11k
15
votes
25
replies
2.5k
views
6 follow
Forum: How to get help on a question that has been buried?
meta biostars
updated 14 months ago by 43k • written 8.1 years ago by ▴ 740
59
votes
25
replies
5.4k
views
8 follow
Forum: Am I crazy, or are most published RNA-seq studies vastly underpowered?
sample-size statistical-power RNA-Seq
updated 10 months ago by 43k • written 3.7 years ago by ▴ 220
17
votes
24
replies
2.5k
views
14 follow
Forum: Bioinformatics terms that might be confusing for beginners
glossary jargon
updated 14 months ago by 43k • written 5.6 years ago by ▴ 10
40
votes
24
replies
3.8k
views
13 follow
Forum: What programming language do you use the most in your work? Which one do you like the best?
Programming Python R Scripting
updated 13 months ago by 43k • written 3.2 years ago by ▴ 100
88
votes
24
replies
5.6k
views
10 follow
Forum: How To Be Helpful As A Biostar Moderator/Editor?
biostars
updated 14 months ago by 43k • written 11.2 years ago by 1.9k
20
votes
24
replies
6.9k
views
6 follow
Forum: Python or R
RNA-Seq alignment next-gen-sequencing
updated 11 months ago by 43k • written 5.9 years ago by ▴ 160
51
votes
24
replies
9.1k
views
7 follow
Forum: Bio-informatics salary distribution versus Java salary distribution in the UK
career
updated 2.3 years ago by 43k • written 9.7 years ago by ★ 5.3k
47
votes
24
replies
6.5k
views
15 follow
Forum: What's fascinating about Bioinformatics for potential students?
career msc
updated 16 months ago by 43k • written 6.5 years ago by 54k
15
votes
24
replies
2.5k
views
7 follow
Forum: Airport.bio: First class ticket to any biological database in the world
RNA-Seq ChIP-Seq SNP
updated 11 months ago by 43k • written 6.0 years ago by ▴ 350
21
votes
24
replies
3.3k
views
Forum: From DEGs of a non-model animals to statistically significantly enriched pathways
pathway-enrichment GO RNA-Seq KEGG
updated 12 months ago by 43k • written 7.6 years ago by ★ 3.4k
12
votes
24
replies
5.5k
views
8 follow
Forum: Biostar 2.0, Second Beta, Help Us Test The New Site
biostars
updated 14 months ago by 43k • written 10.1 years ago by 100k
64
votes
24
replies
3.0k
views
12 follow
Forum: How much I must feel useless?
machine-learning Programming statistics
updated 10 months ago by 43k • written 5.5 years ago by ▴ 80
45
votes
23
replies
6.3k
views
6 follow
Forum: biostar.slack.com: Chat for the biostars community -- [ feel free to join ]
chat slack
updated 14 months ago by 43k • written 6.1 years ago by 104k
34
votes
23
replies
5.3k
views
8 follow
Forum: Unbelievably rapid NGS analysis by Churchill
sequencing NGS churchill
2.0 years ago by Ram 43k
40
votes
23
replies
4.1k
views
12 follow
Forum: Why learn programming in bioinformatics?
Programming
updated 10 months ago by 43k • written 5.6 years ago by ▴ 110
80
votes
23
replies
5.3k
views
11 follow
Forum: Are we facing a bioinformatician shortage?
salary career
updated 13 months ago by 43k • written 9.5 years ago by ★ 3.0k
14
votes
23
replies
2.7k
views
6 follow
Forum: How can bioinformatics tools be grouped/divided into types?
sequencing genome
updated 12 months ago by 43k • written 8.0 years ago by ▴ 110
33
votes
23
replies
4.1k
views
8 follow
Forum: Is there a file format better suited for the era of pangenomics than the .vcf? What are its attributes?
VCF file-format genomics
updated 10 months ago by 22k • written 10 months ago by 4.2k
106
votes
23
replies
22k
views
16 follow
Forum: How Did You Learn Good Practice In Bioinformatics/Computational Biology?
bioinformatics
updated 13 months ago by 43k • written 10.2 years ago by ▴ 590
13
votes
23
replies
4.4k
views
9 follow
Forum: On the utility of publishing a tool paper
poll publishing
updated 2.1 years ago by 43k • written 9.3 years ago by 10k
161
votes
22
replies
18k
views
19 follow
Forum: Advice For Newcomers To The Bioinformatics Field
advice career
updated 17 months ago by 43k • written 10.8 years ago by 9.7k
27
votes
22
replies
5.6k
views
8 follow
Forum: Recommendations of Linux distros for beginners in bioinformatics
training linux
updated 11 months ago by 43k • written 6.4 years ago by ▴ 810
34
votes
22
replies
2.9k
views
11 follow
Forum: Have we failed as bioinformatician in this time of COVID-19
Bioinformatician COVID-19
updated 10 months ago by 43k • written 3.9 years ago by ▴ 10
84
votes
22
replies
4.5k
views
12 follow
Forum: is fortran still used in bioinformatics?
FORTRAN R
updated 13 months ago by 43k • written 4.8 years ago by ▴ 190
1,000 results • Page 2 of 20
Recent Votes
How to get all genes for a specific list of regions in R preferably using Biomart
Answer: differential gene expression analysis when not all samples have an untreated cou
Answer: differential gene expression analysis when not all samples have an untreated cou
Answer: Sheep reference genome remapping coordinates
Answer: Sheep reference genome remapping coordinates
DEG analysis of RNA-seq data across multiple tissues and two conditions
Answer: Assume "yes" as the answer to any prompts with bioconda
Recent Locations • All
United States, 1 minute ago
United States, 1 minute ago
Israel, 1 minute ago
Canada, 1 minute ago
Oviedo, 5 minutes ago
France, 7 minutes ago
Turkey, 8 minutes ago
Recent Awards • All
Popular Question to lefthandgergo ▴ 10
Scholar to Juke34 8.5k
Scholar to GenoMax 141k
Popular Question to carlopecoraro2 ★ 2.5k
Student to manaswiniparija3 ▴ 40
Popular Question to tomas4482 ▴ 390
Popular Question to vinayjrao ▴ 250
Recent Replies
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa by Elisabeth Gasteiger ★ 2.3k
See also https://www.uniprot.org/help/negative_datasets
Comment: Sheep reference genome remapping coordinates by valentinatsar • 0
Thank you for your response As I can understand this tool takes sequence input files right? I have genome-wide genotypes instead of sequen…
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa by me ▴ 750
Ok I made this into an answer. Could you please accept it as such.
Answer: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa by me ▴ 750
You can't. The data does not exist. UniProt only annotates where a lysine is know to be acetylated. There is no way that UniProt can know w…
Comment: How to compare the quality of assemblies by GenoMax 141k
Are there any short read datasets available in SRA? Can you try and see how many left over reads remain after you align to both of your ass…
Comment: Korean human genome reference file by GenoMax 141k
From NCBI: https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_001712695.1/ Use the `Download` button or `curl/datasets`.
Comment: SLURM submission problem: Indexing the Reference Genome is not done in STAR by GenoMax 141k
> But it keeps giving error Please tell us what the error is.
Answer: 10x VDJ (TCR/BCR) BAM to fastq by GenoMax 141k
Looking at the information about the BAM file in the link included at the end of this sentence, it seems that the BAM file does not contain…
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa by Jacky • 0
I got it, thank you for your response.
Answer: DEseq2 by ATpoint 81k
The DESeq2 input is a numeric count matrix (or data.frame) with rows being genes/observations and columns being samples/cells/specimen. Ple…
Comment: How to add motifs in cellranger-arc reference? by Ehsan • 0
Hi. Do you have any updates on what you ended up doing? I am encountering same issue, cannot really find a good TF motif database for zebra…
Comment: biomaRt error for different R version by manaswwm ▴ 490
Wonderful, and thanks for tagging Mike! For those who come back for this problem, the following seemed to work for me: Downgrading `dbply…
Answer: Assume "yes" as the answer to any prompts with bioconda by Juke34 8.5k
From my experience using `biocontainers` base container no need to set `yes` installation is done without any command prompt, otherwise as …
Comment: SLURM submission problem: Indexing the Reference Genome is not done in STAR by Dave Carlson ★ 1.7k
You're allocating 4 compute nodes (`#SBATCH -N 4`), but STAR can't actually make use of more than 1 compute node. You can increase the num…
Answer: Assume "yes" as the answer to any prompts with bioconda by Dave Carlson ★ 1.7k
```conda install -y bioconda::packageX conda-forge::packageY``` should do what you're looking for.
Traffic: 2723 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6