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88
votes
32
replies
8.2k
views
11 follow
Forum: Vintage / unconventional pictures for Bioinformatics
history picture
updated 12 months ago by 38k • written 8.4 years ago by 153k
28
votes
31
replies
4.7k
views
8 follow
Forum: Biostar Ads Are Now Live. Feedback And Comments Are Sought.
biostars
updated 5 weeks ago by 38k • written 9.8 years ago by 97k
78
votes
31
replies
5.7k
views
14 follow
Forum: Do Bad Questions Even Exist?
biostars general education
updated 5 weeks ago by 38k • written 12.1 years ago by 10k
30
votes
31
replies
2.6k
views
11 follow
Forum: I need your help to find my future
future master company student internship Forum
updated 6.6 years ago by ★ 1.4k • written 6.7 years ago by ▴ 90
116
votes
31
replies
35k
views
24 follow
Forum: Where To Look For Quality Bioinformatics Short Courses And Workshops?
Courses
updated 9 months ago by 38k • written 9.6 years ago by 11k
38
votes
31
replies
2.0k
views
10 follow
Forum: To the Biologists out there: What bioinf tool are you missing?
tool Forum
updated 6.7 years ago by ▴ 960 • written 6.7 years ago by ▴ 180
37
votes
30
replies
4.0k
views
7 follow
Forum: Spam In Rss Feeds
meta RSS
updated 28 days ago by 38k • written 10.2 years ago by 5.3k
47
votes
30
replies
3.3k
views
10 follow
Forum: Bioinformatics software distribution
software tools Forum
6.0 years ago by Petr Ponomarenko ★ 2.7k
83
votes
30
replies
5.5k
views
18 follow
Forum: Optimal design for bioinformatics "lab" space?
design lab-space
updated 8 months ago by 38k • written 7.9 years ago by 18k
86
votes
29
replies
8.6k
views
9 follow
Forum: What is the future of EMBL-EBI (and European bioinformatics in general) in case of a 'Brexit'?
EBI EU politics Forum brexit
6.7 years ago by Michael Dondrup 52k
64
votes
29
replies
14k
views
15 follow
Forum: Fundamentals Of Designing Biological Databases?
database
updated 5 weeks ago by 38k • written 12.4 years ago by ▴ 130
72
votes
28
replies
5.2k
views
10 follow
Forum: Bioinformatics commercial services as a risk factor for scientific misconduct
commercial-services ethics misconduct
updated 8 months ago by 38k • written 8.2 years ago by ▴ 90
60
votes
28
replies
7.3k
views
27 follow
Forum: Jim Robinson of the Integrative Genomics Viewer (IGV) uses this
uses-this
updated 14 days ago by 38k • written 8.5 years ago by 97k
63
votes
28
replies
3.0k
views
11 follow
Forum: Bioinformatics analyses & errors: need for better post-publication tools?
RNA-Seq next-gen Forum
6.9 years ago by ablanchetcohen ★ 1.2k
49
votes
27
replies
6.0k
views
10 follow
Forum: Possible augmented reality tools for bioinformatics and current problems
bioinformatics augmented reality visualization 3D Forum
updated 7.4 years ago by • 0 • written 7.4 years ago by ▴ 90
41
votes
27
replies
4.9k
views
8 follow
Forum: Why bioinformaticians need to know programming languages?
R Programming Python Bioinformatics Forum
updated 5.8 years ago by 34k • written 5.8 years ago by ▴ 90
3
votes
27
replies
1.6k
views
7 follow
Forum: What server do you use?
HPC AWS Forum
written 4.7 years ago by ★ 1.6k
65
votes
27
replies
6.2k
views
14 follow
Forum: What is the reason for most software errors in Bioinformatics according to you?
SNP blast software error sequencing R Forum
updated 7.0 years ago by ▴ 960 • written 7.0 years ago by ▴ 110
294
votes
27
replies
41k
views
33 follow
Forum: Up-to-date RNA-Seq Analysis Training/Courses/Papers (Dec 2017)
RNA-Seq sequencing papers
updated 7 months ago by 38k • written 7.2 years ago by ★ 2.4k
30
votes
27
replies
2.0k
views
11 follow
Forum: How do you spend your time (productively) when your script is running?
time management Forum
updated 6.1 years ago by ★ 1.2k • written 6.1 years ago by 7.0k
65
votes
26
replies
18k
views
13 follow
Forum: Macosx For Bioinformatics?
linux
updated 21 days ago by 38k • written 9.3 years ago by 11k
24
votes
26
replies
1.7k
views
6 follow
Forum: Organizing a Bioinformatics Conference ?
conference meeting Forum
updated 5.3 years ago by 70k • written 5.4 years ago by 153k
33
votes
26
replies
2.9k
views
7 follow
Forum: Poll: How many people have PyPy?
pypy python Forum
5.8 years ago by John 13k
15
votes
25
replies
1.8k
views
6 follow
Forum: How to get help on a question that has been buried?
meta biostars
updated 5 weeks ago by 38k • written 7.0 years ago by ▴ 690
39
votes
25
replies
3.5k
views
9 follow
Forum: Making a mac book Bioinfo ready (El Capitan)
mac software installation Forum
7.0 years ago by Eric Normandeau 11k
56
votes
25
replies
2.8k
views
8 follow
Forum: Am I crazy, or are most published RNA-seq studies vastly underpowered?
RNA-Seq power sample size statistical power Forum
updated 2.6 years ago by ▴ 140 • written 2.6 years ago by ▴ 210
20
votes
24
replies
5.9k
views
6 follow
Forum: Python or R
RNA-Seq next-gen sequencing alignment Forum
updated 4.8 years ago by 84k • written 4.8 years ago by ▴ 160
64
votes
24
replies
2.1k
views
12 follow
Forum: How much I must feel useless?
Programming machine learning statistics Forum
updated 4.5 years ago by 9.5k • written 4.5 years ago by ▴ 80
40
votes
24
replies
2.1k
views
13 follow
Forum: What programming language do you use the most in your work? Which one do you like the best?
Programming Python R Scripting
updated 14 days ago by 38k • written 2.1 years ago by ▴ 80
88
votes
24
replies
4.7k
views
10 follow
Forum: How To Be Helpful As A Biostar Moderator/Editor?
biostars
updated 5 weeks ago by 38k • written 10.1 years ago by 1.9k
21
votes
24
replies
2.6k
views
Forum: From DEGs of a non-model animals to statistically significantly enriched pathways
RNA-Seq KEGG GO pathway enrichment Forum
updated 6.6 years ago by 8.3k • written 6.6 years ago by ★ 3.4k
17
votes
24
replies
1.6k
views
14 follow
Forum: Bioinformatics terms that might be confusing for beginners
glossary jargon
updated 6 weeks ago by 38k • written 4.5 years ago by ▴ 10
12
votes
24
replies
4.9k
views
8 follow
Forum: Biostar 2.0, Second Beta, Help Us Test The New Site
biostars
updated 5 weeks ago by 38k • written 9.0 years ago by 97k
51
votes
24
replies
8.2k
views
7 follow
Forum: Bio-informatics salary distribution versus Java salary distribution in the UK
career
updated 15 months ago by 38k • written 8.6 years ago by ★ 5.2k
47
votes
24
replies
4.9k
views
15 follow
Forum: What's fascinating about Bioinformatics for potential students?
career msc
updated 3 months ago by 38k • written 5.4 years ago by 52k
15
votes
24
replies
1.8k
views
7 follow
Forum: Airport.bio: First class ticket to any biological database in the world
RNA-Seq ChIP-Seq SNP Forum
updated 5.0 years ago by 34k • written 5.0 years ago by ▴ 350
40
votes
23
replies
3.1k
views
12 follow
Forum: Why learn programming in bioinformatics?
Programming Forum
4.5 years ago by joselu ▴ 110
34
votes
23
replies
4.6k
views
8 follow
Forum: Unbelievably rapid NGS analysis by Churchill
sequencing NGS churchill
11 months ago by Ram 38k
45
votes
23
replies
5.5k
views
6 follow
Forum: biostar.slack.com: Chat for the biostars community -- [ feel free to join ]
chat slack
updated 6 weeks ago by 38k • written 5.0 years ago by 103k
80
votes
23
replies
4.3k
views
11 follow
Forum: Are we facing a bioinformatician shortage?
salary career
updated 14 days ago by 38k • written 8.4 years ago by ★ 3.0k
14
votes
23
replies
2.0k
views
6 follow
Forum: How can bioinformatics tools be grouped/divided into types?
biologist bioinformatics sequencing genome Forum
updated 7.0 years ago by 23k • written 7.0 years ago by ▴ 110
106
votes
23
replies
20k
views
16 follow
Forum: How Did You Learn Good Practice In Bioinformatics/Computational Biology?
bioinformatics
updated 20 days ago by 38k • written 9.1 years ago by ▴ 570
13
votes
23
replies
3.6k
views
9 follow
Forum: On the utility of publishing a tool paper
poll publishing
updated 12 months ago by 38k • written 8.2 years ago by 10k
27
votes
22
replies
4.6k
views
8 follow
Forum: Recommendations of Linux distros for beginners in bioinformatics
linux training Forum
updated 5.3 years ago by 3.1k • written 5.3 years ago by ▴ 760
67
votes
22
replies
6.3k
views
16 follow
Forum: Learning Python: list of resources
programming python Forum learning
updated 5.7 years ago by ▴ 10 • written 6.4 years ago by ★ 2.8k
84
votes
22
replies
3.4k
views
12 follow
Forum: is fortran still used in bioinformatics?
FORTRAN R
updated 14 days ago by 38k • written 3.8 years ago by ▴ 180
34
votes
22
replies
2.1k
views
11 follow
Forum: Have we failed as bioinformatician in this time of COVID-19
COVID-19 Bioinformatician Forum
updated 2.9 years ago by 13k • written 2.9 years ago by ▴ 10
160
votes
22
replies
16k
views
19 follow
Forum: Advice For Newcomers To The Bioinformatics Field
advice career
updated 4 months ago by 38k • written 9.7 years ago by 9.5k
20
votes
22
replies
12k
views
11 follow
Forum: Nextseq for analysts
basespace casava bcl2fastq nextseq
updated 16 days ago by 38k • written 8.8 years ago by 5.3k
35
votes
21
replies
2.3k
views
11 follow
Forum: Should you restrict use of your software based on your political views?
software
updated 6 months ago by 38k • written 7.5 years ago by 26k
1,000 results • Page 2 of 20
Recent Votes
Comment: bioinformatics problems solved by graphs data structure
Comment: bioinformatics problems solved by graphs data structure
Answer: How to analize multiple letters codes in COG IDs?
Answer: PCA in gene expression
Answer: PCA in gene expression
Comment: Enrichment analysis based on kegg for zebrafish
Question on number of possible alignments
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Recent Replies
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
et mon français est assez bien pour comprendre ce que tu as écrit la ;-)
Comment: How to analize multiple letters codes in COG IDs? by Constanza • 0
Thanks for answering so fast, it was very helpful. I shouldn't pay much attention to if COGs are separated by a comma or not then. As long…
Comment: bioinformatics problems solved by graphs data structure by lieven.sterck 14k
well, because this is not you guys' private forum, there are other people participating (not native french speaking) , just to give a reaso…
Answer: How to get gene from PSIBLAST resuts by lieven.sterck 14k
what you likely will need to do: 1. get the ID of the protein that you are interested in (out of result from PSIBLAST) 2. lookup that ID…
Answer: How to analize multiple letters codes in COG IDs? by Mensur Dlakic ★ 23k
The meaning of individual letters is described in a well-known COG functional code: https://ecoliwiki.org/colipedia/index.php/Clusters_o…
Comment: How to find promoter sequence of a gene? by sunyeping ▴ 40
The organism is mice.
Answer: How to generate GFF/GTF file from cDNA transcipts FASTA file? by Pierre Lindenbaum 153k
BLAT your cDNAs to the reference. This should be a PSL file that can be converted to a psl->gff3 converter (e.g: https://github.com/gperte…
Comment: RNAseq: same reads + more complete scaffold = fewer DEGs? by Darked89 4.2k
You may try to check what happened with DEGs obtained using the 300 fragments assembly by getting the sequences of these genes and comparin…
Comment: ExomeDepth installation error by Medha • 0
Thanks, that did work. Also in next steps, there are some arguments like bam.files, I was wondering do we require to have multiple bam fil…
Comment: ExomeDepth installation error by jared.andrews07 ★ 14k
No idea, I don't use databricks. I'd read the docs, find a local expert to help you out, or contact their support, likely in that order.
Comment: ExomeDepth installation error by Medha • 0
Hi @jaredandrews07 thanks for reverting back. I am new to R and just want to make sure ExomeDepth is working for the first time. For the Rs…
Comment: Embedded stop codon in translated nucleotide sequences in DAMBE by Mensur Dlakic ★ 23k
It is not obvious to me what exact steps you did here, but here is what I do know: there will always be stop codons even in open reading fr…
Comment: Error with a function in ATAC-seq analysis by Chris ▴ 70
So you skip the GRanges()? Yes, no error anymore but I am not sure if that causes changing in downstream analysis.
Answer: ClusterProfiler enrichKEGG – remove organism name in plots? by jv ★ 1.0k
`stringr::str_remove` can remove " - Mus musculus (house mouse)" from the pathway names which are stored under `KEGGPATHID2NAME$to` in your…
Comment: Error with a function in ATAC-seq analysis by jv ★ 1.0k
run `union` on the data frames
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