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Job: Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
19 days ago by Shicheng Guo ★ 9.4k
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Job: Full Stack Web Developer - Cambridge, UK
JavaScript Python Visualisation
written 8.4 years ago by ▴ 400
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Job: Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes DevOps executor AWS Snakemake
updated 8 days ago by 54k • written 8 days ago by ▴ 100
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Job: PhD in bioinformatics / computational biology
NGS Omics Evolution Aging
16 days ago by Arne.Sahm • 0
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Job: Ensembl Plants Senior Bioinformatician
ebi embl genomics ensembl
3 days ago by Ben_Ensembl ★ 2.4k
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Job: Bioinformatics Research Postdoc
RNA-Seq genome
updated 13 days ago by 43k • written 8.2 years ago by • 0
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Job: Bioinformatics PhD position in Aarhus, Denmark
PhD Genomics Cancer
updated 13 days ago by 43k • written 16 days ago by • 0
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Job: Job Opening - Fred Hutch - Director of Training & Community
fred-hutchinson
updated 29 days ago by 43k • written 4 weeks ago by ▴ 20
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Job: Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science genomics postdoc
updated 19 days ago by 43k • written 6 weeks ago by • 0
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Job: Ensembl Outreach Project Leader
ebi embl genomics ensembl
3 days ago by Ben_Ensembl ★ 2.4k
10 results • Page 1 of 1
Recent Votes
Answer: Figures are disappeared from html report of SnpEff
Comment: How to trim transcripts using information from NCBI contamination screen report
Filtering rRNA contamination (indicated by GC content plots) from RNA-seq data
Filtering rRNA contamination (indicated by GC content plots) from RNA-seq data
A: What is the VEP Impact column?
is oxford nanopore technology data paired or single end sequencing?
is oxford nanopore technology data paired or single end sequencing?
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Recent Replies
Comment: Figures are disappeared from html report of SnpEff by Pierre Lindenbaum 161k
the javascript in your html is deprecated or your firefox is just tool old.
Comment: Why gatk VariantAnnotator required bam and coverage files by Pierre Lindenbaum 161k
> I would like to ask why they may require the bam file for this function? hum.. if you want to add the coverage, where do you think gatk …
Comment: Figures are disappeared from html report of SnpEff by analyst ▴ 30
By following above approach I got this ![enter image description here][1] [1]: /media/images/b47490eb-d4c4-4f39-a7b2-f5b7b6b8
Comment: Highest variable features in single cell data by Kazo • 0
I apologize for the confusion. What I meant to say is that, for example, the Trbv17 gene appears among the variable genes. However, when I …
Answer: why renaming Idents in Seurat object doesn't work? by Assa Yeroslaviz ★ 1.8k
I manage to find a workwround, but I don't understand what I did wrong here. my solution was to extract the cluster column as vector and…
Answer: Finding orthologs between genome error by Adrian Altenhoff ★ 1.1k
Hi, thanks for letting us know. In a recent software update, we introduced a problem with the written splice information in the cached …
Comment: Fetch table from clinvar database according to a list of rsid by ashaneev07 ▴ 20
so which one should i prefer? i don't need the entire results i need the condition-Germline table only. (for eg:-from, https://www.ncbi.nlm…
Comment: To get p-values for the TPM by dsull ★ 5.8k
OK, not sure why your intention is to use RSEM p-values for, but at least tell us the commands you ran then otherwise how are we supposed t…
Comment: Fetch table from clinvar database according to a list of rsid by Pierre Lindenbaum 161k
> Don't forget to follow up on your threads. If an answer was helpful, you should upvote it; if the answer resolved your question, you shou…
Comment: different FeatureCounts output for the same data by sehriban.buyukkilic ▴ 10
Sure, I'll inquire about the version of Rsubread. I'll keep you posted if it works :) Thanks
Comment: different FeatureCounts output for the same data by sehriban.buyukkilic ▴ 10
Yeah, let me show you my featureCounts result, it looks like this. It's too low. [1]: /media/images/eb8293fe-e6ae-4b02-92e2-0ba2075b
Comment: Adding CB tag to bam file by Pierre Lindenbaum 161k
samtools addreplacerg is for read groups. This is not what OP asked.
Comment: Adding CB tag to bam file by Maria • 0
When I try ``` samtools addreplacerg -r "@CB\tID:$cell" -o $cell.bam $LINE``` the CB tag gets add to the header, but the tag in every line …
Answer: Figures are disappeared from html report of SnpEff by Pierre Lindenbaum 161k
the remote website providing the javascript or/and the images is down or you're now behind a proxy. Check the firefox console: https://fire…
Comment: Fetch table from clinvar database according to a list of rsid by Pierre Lindenbaum 161k
ah ! and your code doesn't work because clinvar ID is not a rs-ID.
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