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11 results • Page
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Job:
Ensembl Plants Senior Bioinformatician
ebi
embl
genomics
ensembl
19 hours ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
217
views
Job:
Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes
DevOps
executor
AWS
Snakemake
updated 5 days ago by
Michael
54k • written 5 days ago by
jonrkarr
▴ 100
0
votes
0
replies
172
views
Job:
Ensembl Outreach Project Leader
ebi
embl
genomics
ensembl
19 hours ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
179
views
Job:
Bioinformatics PhD position in Aarhus, Denmark
PhD
Genomics
Cancer
updated 11 days ago by
Ram
43k • written 13 days ago by
besen
• 0
0
votes
0
replies
250
views
Job:
PhD in bioinformatics / computational biology
NGS
Omics
Evolution
Aging
14 days ago by
Arne.Sahm
• 0
0
votes
1
reply
2.4k
views
Job:
Full Stack Web Developer - Cambridge, UK
JavaScript
Python
Visualisation
written 8.4 years ago by
Richard Smith
▴ 400
1
vote
1
reply
585
views
Job:
Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
17 days ago by
Shicheng Guo
★ 9.4k
1
vote
0
replies
161
views
Job:
Job Opening - Fred Hutch - Director of Training & Community
fred-hutchinson
updated 27 days ago by
Ram
43k • written 28 days ago by
Fred Hutch (Recruiting)
▴ 20
0
votes
0
replies
208
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Job:
Post-doctoral positions in computational biomedicine
data-science
biomedicine
machine-learning
updated 28 days ago by
Ram
43k • written 28 days ago by
pandey.gaurav
▴ 200
0
votes
0
replies
242
views
Job:
Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science
genomics
postdoc
updated 17 days ago by
Ram
43k • written 5 weeks ago by
besen
• 0
0
votes
0
replies
2.0k
views
Job:
Bioinformatics Research Postdoc
RNA-Seq
genome
updated 11 days ago by
Ram
43k • written 8.2 years ago by
ggrant543
• 0
11 results • Page
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Recent Votes
Comment: Correlation for ATAC-Seq and Chip-Seq
Answer: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
Answer: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
Answer: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
Answer: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
Comment: PDB residue serial inconsistency and PDB id&UniProt ID mismatch
Answer: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
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Recent Replies
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
let me know the scope and scale of the request (e.g. I need to do this for every record in Pubmed) and can help
Comment: Redirection of Duplicate PMIDs
by
LauferVA
4.2k
how is this query itself originating?
Comment: Redirection of Duplicate PMIDs
by
dominickd
• 0
I was able to come up with a workaround using the requests library: import requests pmid = 30134295 url = 'https://pubmed.ncbi…
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
by
HyperEvo
• 0
Thanks for you answer! Actually I have already filtered my peak according to blacklist by bedtools. You mean it's meaningless to compare on…
Answer: Redirection of Duplicate PMIDs
by
GenoMax
141k
More than likely not since the database query seems to work for the redirected PMID but not the original. $ esearch -db pubmed -query …
Comment: DYH17 Structure Prediction
by
anasjamshed
▴ 120
Blast showed PDB: 8J07_n9(human) as best template with 62.99%. I also used swissmodel to model the protein and it showed: https://swissmod…
Comment: How to slice a gvcf file with tabix?
by
Pierre Lindenbaum
161k
No, in haplotypecaller
Comment: How to slice a gvcf file with tabix?
by
Sd
• 0
Then what is the best way to do slicing for 1Mb windows? Doing `--intervals` in the GenomicsDBImport?
Comment: How to slice a gvcf file with tabix?
by
Pierre Lindenbaum
161k
> What is your suggestion to run GenomicsDBImport efficiently? call the GVCF by slices eg: chr1:1000000-2000000<br> run GenomicsDBImport …
Comment: How to slice a gvcf file with tabix?
by
Sd
• 0
I want to run gatk `GenomicsDBImport` tool to build a GenomicsDB. I want to slice it to reduce the computation time since I have 1300 gvcf …
Comment: Problem to remove subset of patients with plink
by
chrchang523
10k
The first step has to be taken outside of PLINK here. E.g. append "_1" and "_2" to the duplicated IDs in the .ped or .fam file, then menti…
Comment: Error in cnetplot enrichplot package
by
Ram
43k
Show us the exact call to `cnetplot()` with a sample of all input parameters. Did you compare notes with your friend?
Comment: How to slice a gvcf file with tabix?
by
Pierre Lindenbaum
161k
why would you need to slice a gvcf file ? all the tools in gatk can use a BED / interval / chromosome to narrow the analysis
Comment: Error in cnetplot enrichplot package
by
Farhad
• 0
I check dataframe it has more than 2 columns
Comment: Error in cnetplot enrichplot package
by
Farhad
• 0
We write it to csv and then send it via email
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