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Installing Joinx on Linux-x86_64

cmake joinx install written 2.9 years ago by njbernstein • 30 • updated 2.9 years ago by ernfrid • 190

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Recent Replies

C: question about calling peak by macs2 by goodez • 260
Yes I do see the images although they are very small. I agree it does look like there is not much...
C: RSEM with ERCC spike-ins formatting issues, ERCC sequences never make it into th by grant.hovhannisyan • 1.1k
Maybe try to prepare the reference only for spike-ins, and then if it works prepare it with spike...
C: RSEM with ERCC spike-ins formatting issues, ERCC sequences never make it into th by brian.capaldo • 0
It does not, it doesn't even include ERCC chromosomes in the .chrlist. RSEM doesn't even through ...
C: question about calling peak by macs2 by ch8316f5eyu • 0
Can you see the image I upload? The images show the peaks where IP and input both are enriched. T...
C: question about calling peak by macs2 by ch8316f5eyu • 0
I mean the good peak is that the IP sample has enrichment and input hasn't enrichment. In the two...
C: Find Transcription factor binding site for a gene list by ATpoint ♦ 7.5k
I think you do not need a database. A promoter is always upstream of the first exon. When you do ...
C: Tools to calculate binned Dxy? by h.mon ♦ 19k
>what's the best way to stay informed about latest developments in genomic analysis tools? Fo...
C: Genomic coordinates from traditional HGVS variants by finswimmer ♦ 5.3k
Hello hannes, I know these recommendation and I fully support the opinion not to use things like...
C: Illegal Division by zero by sicat.paolo20 • 20
Hi thanks to your help and the author's help (He got back to me! :D). You guys helped me what was...
C: RSEM with ERCC spike-ins formatting issues, ERCC sequences never make it into th by grant.hovhannisyan • 1.1k
Can you check if RSEM output has records for example to this gene_id GERCC_00157? I suspect that ...
C: question about calling peak by macs2 by goodez • 260
> I found the result of macs2 is not perfect and I want to know why. I don't understand what ...
C: Make error for abyss-PE with many libraries by Ram ♦ 17k
Hi, I added the line continuations for the command to look better, OP's original command was all...

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