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Job: Science Project Manager / Science Writer
Science-writing Biology Research Data-science
updated 4 days ago by 39k • written 3.9 years ago by • 0
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Job: Postdoctoral Position in Population Genomics of an Amazing Animal
evolution population tunicate genome nanopore
updated 6 days ago by 39k • written 4.0 years ago by ★ 2.9k
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Job: Data scientist position in biomedical machine learning and high-performance computing
machine-learning hpc
updated 5 days ago by 39k • written 3.9 years ago by ▴ 190
1
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NCBI Taxon ID to IMG Genome IDs
taxon html
updated 5 days ago by 39k • written 3.9 years ago by ▴ 20
1
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2
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1.3k
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Job: Postgraduate student in Bioinformatics and Cancer Genomics
single-cell-seq Liver-Cancer scRNA-seq NGS RNA-Seq
updated 4 days ago by 39k • written 3.7 years ago by ▴ 20
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Job: Bioinformatics Analyst II, Genomics Shared Resource
seattle
updated 6 days ago by 39k • written 4.0 years ago by ▴ 10
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1.3k
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Job: EMBL is looking for Scientific Programmer / Bioinformatician
programmer bioinformatician
updated 6 days ago by 39k • written 4.0 years ago by ▴ 30
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Job: PhD position in Functional Genomics at Graz University of Technology (Austria)
ChIP-Seq sequence genome next-gen RNA-Seq
updated 17 hours ago by 39k • written 3.5 years ago by ▴ 10
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Job: Looking a single-cell RNA-seq analysis PhD position /job
single-cell-RNA
updated 4 days ago by 39k • written 3.8 years ago by ▴ 10
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0
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Job: Machine/Deep Learning Postdoc Fellow at UNC Charlotte, NC, USA
machine-learning statistics R python RNA-Seq
updated 1 day ago by 39k • written 3.6 years ago by ▴ 430
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1
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1.3k
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Job: UCSC Genome Browser job opportunity!
browser
updated 1 day ago by 39k • written 3.6 years ago by ▴ 30
0
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1
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1.3k
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Job: (Associate) Staff Scientist, Bioinformatics
Genomics Computational-Biology
updated 17 hours ago by 39k • written 3.5 years ago by ▴ 10
0
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2
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1.3k
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Job: Research Fellow - Bioinformatics
genome next-gen
updated 4 days ago by 39k • written 3.8 years ago by • 0
2
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0
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1.3k
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Job: Seeking bioinformaticians and data engineers for product research study
RNA-Seq cwl aws workflows
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
3
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0
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1.3k
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News: Analysis of single cell RNA-seq data - Berlin 23 -27 March 2020
scRNA-seq RNA-Seq
updated 5 days ago by 39k • written 3.9 years ago by ★ 2.3k
0
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0
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1.3k
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Job: Research Scientist Bioinformatics working on scRNA-Seq at Evotec SE (Goettingen, DE)
scRNA-Seq RNA-Seq R
updated 1 day ago by 39k • written 3.7 years ago by ★ 1.4k
0
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0
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1.2k
views
Job: Postdoc position in machine learning and variation interpretation
postdoc machine-learning
updated 20 hours ago by 39k • written 3.6 years ago by ▴ 10
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0
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1.2k
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Job: Computational Genomics postdoc at NCBI, NIH. Bethesda, MD, USA.
deep-learning genomics
updated 1 day ago by 39k • written 3.6 years ago by ▴ 140
1
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0
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1.2k
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Job: PhD positions in Functional Genomics at Graz University of Technology (Austria) - Deadline coming soon!
Genomics Epigenomics transposons ENCODE
updated 17 hours ago by 39k • written 3.4 years ago by ▴ 10
0
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0
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1.2k
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Job: Postdoctoral Position / Computational Scientist position - UT Southwestern, Dallas, TX, USA
computational genome
updated 1 day ago by 39k • written 3.6 years ago by • 0
0
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0
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1.2k
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Job: Postdoctoral Fellow at Center for Microbiome Innovation, University of California, San Diego
sequencing
updated 1 day ago by 39k • written 3.7 years ago by • 0
0
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0
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1.2k
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Job: Bioinformatician: NEW YORK CITY - Institute for Data Science and Genomic Technology, Mount Sinai School of Medicine
microbiome bioinformatician systems-biology
updated 1 day ago by 39k • written 3.6 years ago by ▴ 30
2
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3
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1.2k
views
Job: Senior bioinformatician, Auckland, New Zealand (3 yrs fixed-term)
virus software database sequencing
updated 5 days ago by 39k • written 3.9 years ago by ▴ 830
2
votes
3
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1.2k
views
mutational signatures in different tumor samples
somatic mutation mutational signature
updated 5 days ago by ★ 2.9k • written 4.4 years ago by ▴ 20
0
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0
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1.2k
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Job: Software Developer - BC Cancer Research Center, Vancouver BC
big-data software sequencing
updated 6 days ago by 39k • written 4.0 years ago by • 0
11
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5
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1.2k
views
Forum: What bioinformatic training?
training RNA-Seq illumina
updated 6 days ago by 39k • written 4.0 years ago by ▴ 150
0
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0
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1.2k
views
Job: 2 Postdoctoral fellowships (2 years), focused on metagenomics based biosurveillance of fungal pathogens of conifer trees
metagenomics eDNA ngs
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
votes
1
reply
1.2k
views
Best tool for bacterial genomic island prediction?
genome genomic-island
updated 6 days ago by 39k • written 4.0 years ago by ▴ 100
0
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0
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1.2k
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Job: Developing Next Generation Programmable Antibiotics
antibiotics RNA-Seq pathogen genomics
updated 1 day ago by 39k • written 3.6 years ago by • 0
2
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0
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1.2k
views
Tutorial: Free Book : Computational Biology of a cell signalling pathway using R
cell-signalling R Computational-Biology
updated 6 days ago by 39k • written 17 months ago by ▴ 20
0
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0
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1.2k
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Job: Postdoctoral Scholar in Translational Bioinformatics for Precision Cancer Medicine at Stanford
cancer
updated 4 days ago by 39k • written 3.8 years ago by • 0
0
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0
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1.2k
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News: Webinar: Mapping the single-cell atlas of the bone marrow microenvironment
webinar RNA-Seq next-gen single-cell
updated 5 days ago by 39k • written 3.9 years ago by ▴ 450
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0
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1.2k
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Job: PhD student / PostDoc (f/m/x) in Cancer Systems Biology
gene next-gen
updated 4 days ago by 39k • written 3.7 years ago by • 0
0
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2
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1.2k
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Job: Computational Biologist / Bioinformatician Required - Cambridge
pipelines ngs next-gen r
updated 1 day ago by 39k • written 3.6 years ago by • 0
0
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0
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1.2k
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Job: Bioinformatician post at Wellcome Centre for Cell Biology Edinburgh
developer
updated 5 days ago by 39k • written 3.9 years ago by • 0
1
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0
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1.2k
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Job: PhD position in cancer systems biology (Budapest, Hungary)
budapest transcriptomics PhD cancer RNA-Seq
updated 17 hours ago by 39k • written 3.5 years ago by ▴ 10
2
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8
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1.2k
views
How to append two fasta files?
unix fasta python
updated 6 days ago by 39k • written 4.0 years ago by ▴ 100
0
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0
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1.2k
views
Job: Data Manager - BC Cancer Research Center, Vancouver BC
computational big-data genomic
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
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0
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1.2k
views
Job: Applications Scientist, Data Science - Boulder, CO
data-analysis genome next-gen genomics
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
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1
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1.2k
views
Job: HudsonAlpha - Software Developer (Huntsville, Alabama, USA)
developer genetics genomics
updated 4 days ago by 39k • written 3.8 years ago by • 0
1
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2
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1.2k
views
Job: Senior Bioinformatics Analyst
genetics python next-gen gatk
updated 6 days ago by 39k • written 3.9 years ago by ▴ 10
0
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0
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1.2k
views
Job: Postdoctoral Fellowship - Aparicio Lab
genome single-cell
updated 4 days ago by 39k • written 3.7 years ago by • 0
2
votes
2
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1.2k
views
Job: Bioinformatics Data Engineer @ Baylor Genetics (Houston, TX, USA)
pipeline-engineer NoSql linux Agile java
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
1
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0
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1.2k
views
Job: Data Science Specialist / Product Consultant
data-science
updated 6 days ago by 39k • written 4.0 years ago by 13k
4
votes
0
replies
1.2k
views
Job: Ensembl Outreach Officer
training ensembl
updated 6 days ago by 39k • written 4.0 years ago by 23k
0
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0
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1.2k
views
Job: Bioinformatics Scientist - BC Cancer Research Center, Vancouver, BC
software genomics
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
votes
0
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1.2k
views
Job: Data Wrangler, UCSC Genomics Institute
Genomics UCSC Data-Wrangler
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
1
vote
5
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1.2k
views
Forum: PhD: Research interest or better program?
PhD
updated 6 days ago by 39k • written 4.0 years ago by • 0
0
votes
0
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1.2k
views
Job: Applications Scientist, Data Science - Pleasanton, CO
data-analysis genome next-gen genomics
updated 6 days ago by 39k • written 4.0 years ago by • 0
4
votes
12
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1.2k
views
Forum: publicly available data
arrayexpress GEO SRA
updated 1 day ago by 39k • written 3.7 years ago by ▴ 110
717 results • Page 4 of 15
Recent Votes
A: Extract Reads From A Bam File That Fall Within A Given Region
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes
Comment: Alignment of case vs. control from different origin
A: understanding bedtools coverage output
Answer: Alignment of case vs. control from different origin
Comment: Alignment of case vs. control from different origin
Comment: Gene prediction software
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Recent Replies
Comment: Differential protein expression analysis by Ribo ▴ 40
Thank you! Is there a recommended tutorial for proteomics analysis?
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
I clustered the samples into subtypes and am now comparing the differential expression across the subtypes.
Answer: Limma returned only positive logFC values by Gordon Smyth ★ 6.1k
No, your code isn't correct. You are testing an intercept equal to zero instead of testing for a logFC. I wonder what comparison you were t…
Answer: Extract sequences from a fastq file by a list of IDs by GenoMax 129k
Using `filterbyname.sh` from [**BBMap suite**][1]: You need to include the `/1` in the header in your list file (here I am using the `nam…
Comment: Limma returned only positive logFC values by melissachua90 ▴ 40
Yeah, I added the design matrix. `design <- model.matrix(~0+group)`. These are raw counts.
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes by Ayish • 0
Thank you for reply. I have Illumina paired-end reads. Would it be fine if I use hard-masking for STAR and soft-masked genome for BRAKER2? …
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes by Darked89 4.4k
Soft masking the genome (unless something changed) not make any difference for STAR. Depending on how your RNA-Seq is done (Illumina? paire…
Answer: How to handle NaN in emmax Kinship matrix? by Thu • 0
Hi! Thanks for sharing your solution! It works! :)
Comment: Gene prediction software by Darked89 4.4k
Looks like there are five Clarias genomes: * https://www.ncbi.nlm.nih.gov/genome/?term=txid13012[Organism:exp] The most complete seems t…
Comment: Alignment of case vs. control from different origin by sativus ▴ 10
Again, thank you so much for these very clearly explained summaries. After reading some articles on the matter, i feel i have a much better…
Answer: Extract sequences from a fastq file by a list of IDs by colindaven 4.9k
Some people I know have used filter-fastq successfully: https://github.com/Floor-Lab/filter-fastq
Comment: Extract sequences from a fastq file by a list of IDs by Pierre Lindenbaum 154k
> but none of them work for me https://meta.stackexchange.com/questions/147616/
Comment: Extract sequences from a fastq file by a list of IDs by Pierre Lindenbaum 154k
https://meta.stackexchange.com/questions/147616/
Comment: Extract sequences from a fastq file by a list of IDs by mhpakdel96 • 0
I have tried this one before but the output file is empty
Comment: Extract sequences from a fastq file by a list of IDs by mhpakdel96 • 0
I have tried all of them but none of them work for me
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