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1,000 results • Page
3 of 20
Sort: Rank
Rank
Views
Votes
Replies
5
votes
5
replies
377
views
DNA methylation (RRBS/WGBS) prediction from DNA sequence (WGS)
methylation
Prediction
DNA
WGS
WGBS
Imputation
2 days ago by
Lalaland
▴ 30
0
votes
0
replies
205
views
Job:
Computer scientist / Bioinformatician
data-science
software-development
structural-bioinformatics
machine-learning
updated 3 days ago by
Ram
37k • written 4 days ago by
David
▴ 10
2
votes
1
reply
197
views
Define and set up Standards curve
quantstudio
qPCR
qpcr
updated 4 days ago by
Matthias Zepper
2.9k • written 4 days ago by
Maria17
▴ 10
0
votes
0
replies
140
views
Bootstrap in PhyML
phyml
bootstrap
4 days ago by
Jimpix
▴ 10
0
votes
0
replies
118
views
Cibersort phenotpe file to create signature matrix
deconvolution
cibersort
file
phenotype
4 days ago by
ce810b57
• 0
0
votes
0
replies
131
views
Enrichment map in python/ Pathway network by using python
interaction.
enrichment
network
pathway
analysis
4 days ago by
sonsunjirachote
• 0
0
votes
1
reply
231
views
TCGAbiolinks HT-Seq count
HT-Seq
count
updated 4 days ago by
pilargmarch
▴ 10 • written 6 days ago by
Elizabeth
• 0
0
votes
1
reply
186
views
How to analysis genomes with orthologs?
ortholog
genome
annotation
updated 4 days ago by
GenoMax
125k • written 4 days ago by
沛煒
• 0
1
vote
4
replies
430
views
translate CDS to prot formatted with nt nubers
tool
translate
updated 4 days ago by
GenoMax
125k • written 8 days ago by
vvasta
• 0
1
vote
2
replies
213
views
VCF to Plink files
vcf
pink
pgen
psam
3 days ago by
hi.there
• 0
0
votes
0
replies
120
views
Does the falcon input CLR reads need corrected by Canu?
Genome
assemble
4 days ago by
leeunfeng
• 0
21
votes
10
replies
6.1k
views
6 follow
Randomize Read Order In Multigbp Fastq File?
fastq
updated 4 days ago by
sovrappensiero
▴ 50 • written 11.6 years ago by
2184687-1231-83-
★ 5.0k
1
vote
2
replies
263
views
Heatmap by group in R
ggplot2
R
heatmap
updated 4 days ago by
bkleiboeker
▴ 170 • written 5 days ago by
poet1988
▴ 10
0
votes
0
replies
104
views
CUT&RUN H3K27me3 normalization with spike-in
deepTools
4 days ago by
mohansri1
• 0
0
votes
0
replies
120
views
How to identify nodes in a network with a higher degree and higher edge variance?
network
variance
WGCNA
igraph
updated 4 days ago by
ATpoint
68k • written 4 days ago by
adR
▴ 100
14
votes
9
replies
430
views
Scientific Notation to Decimal
notation
decimal
scientific
4 days ago by
am29
▴ 30
2
votes
4
replies
467
views
A way to get a list of determined and undetermined indexes using illumina interop library?
interop
python
illumina
updated 4 days ago by
GenoMax
125k • written 9 days ago by
fluffycowbird
▴ 20
2
votes
2
replies
3.2k
views
IGV resizing tracks
IGV
updated 4 days ago by
Ivan
▴ 10 • written 6.8 years ago by
14134125465346445
★ 3.6k
0
votes
2
replies
203
views
Can you apply Base Score Recalibration in parallel?
wgs
updated 4 days ago by
LChart
1.8k • written 4 days ago by
optimistsso4co3
▴ 100
0
votes
3
replies
281
views
Change accession number to chromosome number in reference genome
fasta
chromosome
updated 3 days ago by
Ram
37k • written 4 days ago by
Tsigabu
• 0
1
vote
1
reply
137
views
Aspera: Command 'ascp' not found
aspera
linux
idr
ssh
updated 4 days ago by
ATpoint
68k • written 4 days ago by
Keenan
• 0
0
votes
0
replies
94
views
Median depth across samples from multi-sample VCF
DP
bcftools
4 days ago by
alex.blakes
• 0
0
votes
3
replies
262
views
NMDS: how many axes to plot?
NMDS
updated 3 days ago by
Mensur Dlakic
★ 22k • written 5 days ago by
LaFra
▴ 10
0
votes
5
replies
268
views
Add Information to Protein Fasta Headers
protein
fasta
functional-annotation
header
4 days ago by
ahmadjoyyia
▴ 10
3
votes
2
replies
178
views
WGCNA gene selection: gene significance or LASSO?
LASSO
WGCNA
updated 4 days ago by
rpolicastro
11k • written 4 days ago by
janinubinu
• 0
0
votes
0
replies
93
views
why count_matrix.csv generated by "prepDE.py3" showed unidentified IDs
Stringtie
RNA-seq
22 hours ago by
Pegasus
▴ 40
0
votes
3
replies
286
views
Single sample GSEA analysis
single
sample
updated 3 days ago by
jv
▴ 780 • written 5 days ago by
tujuchuanli
▴ 100
0
votes
3
replies
289
views
biological vs. technical definition of "insert size"
grinder
simulated-reads
shotgun-sequencing
updated 4 days ago by
ATpoint
68k • written 5 days ago by
sovrappensiero
▴ 50
0
votes
0
replies
88
views
Haloplex HS - should you remove duplicates?
deduplicate
Haloplex
duplicates
5 days ago by
amy__
▴ 50
3
votes
4
replies
215
views
RNAseq: Scaling or not scaling with rlog transformed counts
scale
rlog
RNAseq
clustering
DESeq2
5 days ago by
Laurie
• 0
0
votes
0
replies
92
views
Interpreting SnpEff output plots
NGS
Annotation
SnpEff
WGS
WES
5 days ago by
Alireza
▴ 20
0
votes
0
replies
81
views
Using DANPOS2 to determine nucleosome positions
MNase-seq
DANPOS
ENCODE
bigwig
5 days ago by
elisheva
▴ 120
3
votes
7
replies
430
views
How to change every third line in a fastq library
fastq
updated 5 days ago by
Ram
37k • written 5 days ago by
ricksama
• 0
0
votes
0
replies
89
views
How to determine the receptor and binding site of a protein transcribed from a gene
gene
5 days ago by
yoser4
▴ 10
0
votes
3
replies
181
views
blast engine error empty blast query vector
error
alignment
Blast
updated 5 days ago by
pbioinf
▴ 30 • written 5 days ago by
Sowmya Pulapet
▴ 10
0
votes
0
replies
99
views
WGCNA Error in moduleEigengenes: setting key from pcagrey to pcagrey_
wgcna
5 days ago by
瀚
• 0
0
votes
0
replies
103
views
Exon 1 coverage of ADAMTS2 gene
WGS
Coverage
5 days ago by
ramya
• 0
0
votes
0
replies
121
views
bcftools error: bcftools could not parse pval threshold loidly
bcftools
mpileup
5 days ago by
mut.patricia
▴ 20
0
votes
0
replies
144
views
How to show the correlation between the expression of one gene and all the cell miRNAs expression levels?
expression
miRNA
correlation
5 days ago by
Zahra
▴ 90
0
votes
2
replies
190
views
No variants found ( have problem in the handbook)
bcftools
handbook
variation_calling
igv
5 days ago by
quanyu
• 0
4
votes
3
replies
285
views
gff file from NCBI RefSeq GCF dataset has an invalid format
NCBI
gff
3 days ago by
Michael
• 0
1
vote
2
replies
394
views
How can I best sequence T and B cells for the sequence of their receptors?
scRNASeq
B-cells
updated 5 days ago by
mizraelson
▴ 60 • written 10 months ago by
pasolol
• 0
0
votes
0
replies
136
views
Anti-CRISPR and Cas protein interactions
crispr
anti-crispr
proteins
updated 5 days ago by
GenoMax
125k • written 5 days ago by
Moein
• 0
0
votes
0
replies
134
views
issues with amber_minimize.py failing to use CUDA within alphafold
linux
CUDA
amber
alphafold
5 days ago by
charlieclark1ee
▴ 10
1
vote
1
reply
170
views
tools that align sequences in mouse and human
r
updated 5 days ago by
dthorbur
▴ 260 • written 5 days ago by
Chironex
▴ 40
0
votes
0
replies
125
views
Database of Embryo-Lethal or Known Knockout Phenotype Genes in Rice
annotation
database
rice
gene
5 days ago by
sviatoslav.kendall
▴ 840
0
votes
0
replies
135
views
Application of the branch, site and branch-site models for detecting selection with codeml (PAML)
evolution
codeml
PAML
5 days ago by
Denis
▴ 260
0
votes
5
replies
309
views
Protein protein interactions
protein
partners
interacting
interaction
4 hours ago by
Peerzada
• 0
0
votes
0
replies
119
views
How to normalize the counts when you are looking at 3'UTR?
RNA-Seq
bedtools
5 days ago by
barrypraveen
▴ 100
2
votes
3
replies
264
views
Is there a method to group and summarize the `homer` `findMotifsGenome.pl` output?
Motif-analysis
5 days ago by
Dan
▴ 60
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Answer: How can I convert this pairwise format to fasta?
Answer: How can I convert this pairwise format to fasta?
Piping bowtie2 output directly into BAM
Answer: How to merge unique/non overlapping genes between 2 gene model GFF3 files?
Answer: How to merge unique/non overlapping genes between 2 gene model GFF3 files?
Comment: RNA Editing data from RNA-seq
Comment: RNA Editing data from RNA-seq
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Recent Replies
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