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Biostar
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Varun Gupta
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7 follow
130
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6.0 years ago by
mforthman
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updated 7 months ago by
Ram
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written 12.0 years ago by
Pierre Lindenbaum
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37
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11 follow
244
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36
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8.6k
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updated 6 months ago by
Ram
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written 7.4 years ago by
Shicheng Guo
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9.3k
49
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36
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7.9k
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36
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36
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36k
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17 follow
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d.s.account
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written 10.5 years ago by
Sanjar
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140
251
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36
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32k
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27 follow
updated 6 months ago by
Ram
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written 13.5 years ago by
Pierre Lindenbaum
157k
38
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36
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5.6k
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11 follow
updated 12.5 years ago by
lh3
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written 12.5 years ago by
Tomer Altman
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40
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36
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13k
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9 follow
updated 6.3 years ago by
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130
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written 4.6 years ago by
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updated 2.2 years ago by
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written 2.2 years ago by
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140
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20
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written 5.1 years ago by
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620
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updated 5.4 years ago by
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written 5.4 years ago by
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59
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25
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written 5.3 years ago by
collmerr
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40
84
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updated 18 months ago by
Ram
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written 8.8 years ago by
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88
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38k
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15 follow
updated 9.6 years ago by
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960
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written 13.0 years ago by
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3.4k
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36
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11k
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18 follow
34
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35
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15k
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149
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60k
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Tutorial:
Tools For Metagenomic Data Analysis
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18 follow
updated 7 months ago by
Ram
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written 10.5 years ago by
Jeremy Leipzig
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35
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updated 6.7 years ago by
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written 6.7 years ago by
Rox
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1.4k
40
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35
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10 follow
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35
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2.6k
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updated 12 weeks ago by
Jordan M Eizenga
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360
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written 3 months ago by
anivlete
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14
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35
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45
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35
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5.2k
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60
97
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35
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25k
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updated 9.7 years ago by
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written 13.3 years ago by
pixie@bioinfo
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4
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35
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8.8k
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updated 7 months ago by
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written 9.7 years ago by
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50
76
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35
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28k
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updated 5 months ago by
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written 7.3 years ago by
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22
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35
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5.2k
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65
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35
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19k
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updated 13 months ago by
Pierre Lindenbaum
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written 12.3 years ago by
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270
26
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35
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30k
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updated 8 months ago by
Jan Röslein
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10
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written 9.5 years ago by
komal.rathi
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35
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8.6k
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17
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35
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2.9k
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6.8 years ago by
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2.9k
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updated 4.9 years ago by
ATpoint
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written 4.9 years ago by
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150
121
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40k
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83
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34
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17k
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updated 4 months ago by
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written 5.3 years ago by
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1.3k
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34
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15k
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updated 23 months ago by
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written 9.9 years ago by
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540
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34
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36
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2.3k
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105k
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updated 1 day ago by
Jorge Amigo
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written 11.3 years ago by
GPR
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390
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updated 5.6 years ago by
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written 5.6 years ago by
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Recent Replies
Answer: Converting from BED to SAF/GFF
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I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
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Now there is [bed2gff](https://github.com/alejandrogzi/bed2gff), if you want to work only with a gff file!
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now there is also [bed2gff](https://github.com/alejandrogzi/bed2gff) if you want to convert .bed files to .gff3 files!
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I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
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Writing a solution for anyone interested.
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Thanks.
I'll try.
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Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
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> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
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For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
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By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
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Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
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c.
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actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
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Correct. Data that went into the assembly.
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by
langziv
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Total bases (number of reads * read length) should be calculated after removal of adapters, right?
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