updated 21 hours ago by
Hagen
▴
10
•
written 10.2 years ago by
filipzembol
▴
180
34
votes
16
replies
20k
views
9 follow
4
votes
11
replies
699
views
Tutorial:
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
updated 2 hours ago by
Ram
43k
•
written 16 hours ago by
BioinfGuru
★
1.7k
4
votes
9
replies
2.6k
views
Tool:
CANEapp, a user-friendly application for automated next generation transcriptomic data analysis
written 8.2 years ago by
dvelmeshev
•
0
2
votes
7
replies
5.1k
views
6 follow
updated 14 hours ago by
ATpoint
81k
•
written 7.1 years ago by
boymin2020
▴
80
2
votes
6
replies
994
views
0
votes
5
replies
549
views
updated 13 hours ago by
BioinfGuru
★
1.7k
•
written 1 day ago by
rrehimi
•
0
1
vote
5
replies
373
views
3
votes
4
replies
402
views
1
vote
4
replies
328
views
what's the genomic location and name of gene responsible for orange and black patches in calico cats
updated 7 hours ago by
Matthias Zepper
4.5k
•
written 10 hours ago by
Ann
★
2.4k
0
votes
4
replies
516
views
0
votes
3
replies
215
views
7
votes
3
replies
2.7k
views
updated 21 hours ago by
colindaven
6.3k
•
written 15 months ago by
Dr.Animo
▴
130
5
votes
3
replies
683
views
0
votes
2
replies
308
views
23 hours ago by
Ashok
•
0
1
vote
2
replies
364
views
updated 20 hours ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
rahu
•
0
0
votes
2
replies
302
views
3
votes
2
replies
283
views
0
votes
2
replies
319
views
13 hours ago by
_quantum_girl_
▴
10
0
votes
1
reply
126
views
updated 6 hours ago by
GenoMax
141k
•
written 8 hours ago by
rebecca.calvo
•
0
0
votes
1
reply
146
views
0
votes
1
reply
113
views
1
vote
1
reply
320
views
17 hours ago by
Dinmukhamed
•
0
0
votes
1
reply
170
views
0
votes
1
reply
69
views
1
vote
1
reply
325
views
12 hours ago by
renan.igor
•
0
0
votes
0
replies
77
views
0
votes
0
replies
84
views
13 hours ago by
DanielEB_fisk
▴
20
0
votes
0
replies
55
views
updated 56 minutes ago by
Ram
43k
•
written 6 hours ago by
Bioinformatician
•
0
0
votes
0
replies
94
views
0
votes
0
replies
101
views
0
votes
0
replies
77
views
11 hours ago by
Rodolfo Adrián
•
0
0
votes
0
replies
109
views
updated 13 hours ago by
Ram
43k
•
written 21 hours ago by
atharvakarkare14
▴
10
0
votes
0
replies
85
views
0
votes
0
replies
81
views
11 hours ago by
Nitin
•
0
0
votes
0
replies
70
views
0
votes
0
replies
100
views
updated 13 hours ago by
Ram
43k
•
written 17 hours ago by
Dinmukhamed
•
0
Recent Locations •
All
India, 3 minutes ago
Finland, 3 minutes ago
India, 4 minutes ago
Palau, 10 minutes ago
United States, 11 minutes ago
USA, 35 minutes ago
Syracuse, NY, United States, 38 minutes ago
Recent Awards •
All
Popular Question to
Rodolfo Adrián
•
0
Scholar to
damian.szk
▴
70
Popular Question to
alphaflylizard
•
0
Popular Question to
Shicheng Guo
★
9.4k
Popular Question to
DanielEB_fisk
▴
20
Recent Replies
Comment: Ciriquant not configuring hisat2 indexed files
by
Atul K.
•
0
Thank you. Decreased the threads to 2 (changed the threads: 2 in the config file; but it was somehow using 4). It did run for sometime but …
Answer: GTF file from Stringtie to R Studio for either Ballgown or DESeq2
by
Ram
43k
See this section on how to use tximport to import StringTie output for DESeq2 processing: https://bioconductor.org/packages/devel/bioc/vign…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Can you explain the normalization or give me a link that describes it, please? Comparison across samples will always be caveated as RNA-seq…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
Sorry, I see how harsh I come across. It's not good practice to use multiple versions of R in the same project. I can understand legacy pro…
Answer: MEGA Analysis Issue on High-Performance Computer
by
Mensur Dlakic
★
27k
> I have ensured that I am using the latest version of MEGA and that other applications are not consuming excessive resources during the an…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
Some of us are still learning and fall foul to knowledge limitation fairly regularly. Luckily we have people to put us in our place.
Answer: Running blastp with BLAST+ 2.15.0 against custom database; need to identify hits
by
GenoMax
141k
> I know that I should be able to collect protein sequences from the blastp results into a file, but I do not know how to do this.
You c…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
rheab1230
▴
140
I got the normalized gene count from gtex portal. they use inverse quantile normalization
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
Matthias Zepper
4.5k
It is not entirely off, but evidently also not correct.
Melanin biosynthesis is a multistep process, that indeed prominently involves the…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
Ram
43k
> so a single Rscript could utilise multiple environments and versions
How is that sane, let alone "better"? Also, why use `snap` for curl…
Comment: how to find genes that are significantly expressed in brain cortex samples
by
Ram
43k
Normalized how?
Comment: Duplicate marking, read names, and the SRA
by
GenoMax
141k
With public data one has to work with what is there. If the information about position is absent then only thing that could be done is to l…
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
by
BioinfGuru
★
1.7k
Or better yet. To have an R package that allows access to conda environments via "conda list env" so that environments can be switched with…
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
GenoMax
141k
If GPT is right then it says that:
> The specific gene responsible for the orange and non-orange (black or
> gray) fur colors in cats is t…
Comment: what's the genomic location and name of gene responsible for orange and black pa
by
Jean-Karim Heriche
27k
As far as I know the Orange locus hasn't been mapped to a gene. Maybe this paper will help in narrowing the search: https://www.ncbi.nlm.ni…
Traffic: 1505 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6