25
votes
13
replies
25k
views
8 follow
3
votes
8
replies
5.7k
views
updated 20 hours ago by
Kevin Blighe
84k
•
written 5.0 years ago by
fi1d18
★
4.1k
2
votes
7
replies
2.2k
views
7 follow
4
votes
7
replies
494
views
7
votes
6
replies
262
views
6 follow
updated 2 hours ago by
shenwei356
7.9k
•
written 16 hours ago by
pinheirofabiano
▴
10
5
votes
6
replies
389
views
updated 1 hour ago by
Maxime Garcia
▴
220
•
written 2 days ago by
Eliveri
▴
320
0
votes
5
replies
481
views
0
votes
5
replies
317
views
2
votes
4
replies
442
views
13 hours ago by
e.r.zakiev
▴
30
5
votes
3
replies
329
views
updated 2 hours ago by
Maxime Garcia
▴
220
•
written 4 weeks ago by
Matthias Zepper
3.3k
5
votes
3
replies
236
views
updated 3 hours ago by
oschwengers
▴
90
•
written 23 hours ago by
sovrappensiero
▴
60
0
votes
3
replies
361
views
2
votes
2
replies
148
views
updated 3 hours ago by
Maxime Garcia
▴
220
•
written 13 hours ago by
selenaajohn
•
0
2
votes
2
replies
1.8k
views
1
vote
2
replies
253
views
14 hours ago by
emm008
•
0
1
vote
2
replies
147
views
1
vote
2
replies
173
views
0
votes
2
replies
55
views
0
votes
2
replies
127
views
0
votes
2
replies
47
views
0
votes
2
replies
172
views
updated just now by
ATpoint
70k
•
written 1 day ago by
selenaajohn
•
0
0
votes
1
reply
168
views
updated 23 hours ago by
Pierre Lindenbaum
153k
•
written 1 day ago by
m. bioinfo
•
0
0
votes
1
reply
171
views
0
votes
1
reply
161
views
updated 3 hours ago by
Mike Smith
★
2.0k
•
written 1 day ago by
solarchan7
•
0
0
votes
1
reply
36
views
updated 1 hour ago by
lieven.sterck
14k
•
written 1 hour ago by
VANSHIKA
•
0
0
votes
0
replies
55
views
0
votes
0
replies
68
views
0
votes
0
replies
99
views
19 hours ago by
James
▴
30
0
votes
0
replies
97
views
21 hours ago by
anasjamshed
▴
120
0
votes
0
replies
4
views
0
votes
0
replies
69
views
Recent Votes
Recent Locations •
All
Norway, just now
France, 1 minute ago
Germany, 1 minute ago
United States, 3 minutes ago
Turkey, 3 minutes ago
United Kingdom, 4 minutes ago
Hungary, 5 minutes ago
Recent Awards •
All
Popular Question to
santos48
▴
40
Popular Question to
ghataksnd
▴
10
Popular Question to
igorm
▴
20
Scholar to
colindaven
4.5k
Teacher to
Matthias Zepper
3.3k
Popular Question to
mohammedtoufiq91
▴
210
Popular Question to
MatthewP
★
1.2k
Recent Replies
Comment: Nextflow Stringtie: command not found Error
by
ATpoint
70k
It's bad practice to delete posts that received an answer ( = a user invested time - in this case me but it of course applies generally). D…
Comment: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil
by
EkHe
•
0
Hi @juke34, if you're able, can you please clarify something for me (based on the answer you've given here)? Thanks a lot in advance. I als…
Answer: Practical Haplotype Graph -- Pathing Error
by
lcj34
▴
220
FYI - The latest PHG docker version (tag 1.4) has a fix for this issue.
Comment: Nextflow: No space left on device, process using output directory as input?
by
Maxime Garcia
▴
220
Nextflow should only link inputs (unless stated otherwise), so even if you use outdir as input it should not be much of an issue, but still…
Comment: Problem in converting SAM to BAM file by DROP SEQ
by
lieven.sterck
14k
Hi https://www.biostars.org/u/126271/,
welcome.
it might be good to add some more info on your "question". Now it only shows an error mes…
Comment: Trying to install Roary with Conda results in error message
by
tobiwan
•
0
Thank you for your answer
I'm using Ubuntu 22.04.2 LTS,
command line used: conda install roary. Or do you need a screenshot of the whole …
Comment: Nextflow: No space left on device, process using output directory as input?
by
colindaven
4.5k
Yes, don't use the outdir as an input. You might get infinite loops.
Comment: UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid
by
wangjincheng
•
0
I tried unzipped file, it shows the same error
Comment: UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid
by
Pierre Lindenbaum
153k
> use python package to load and analysis vcf.gz files
looks like it doesn't like gzipped file. Are you sure this software can read gzip…
Comment: Trying to install Roary with Conda results in error message
by
ATpoint
70k
This cannot be answered. Add your command line and operating system.
Comment: split fasta file to train deep learning model
by
shenwei356
7.9k
shuffle the sequences, with a rand seed 1.
seqkit shuffle --two-pass --rand-seed 1 hairpin.fa -o hairpin.s1.fa
testing data
…
Comment: split fasta file to train deep learning model
by
pinheirofabiano
▴
10
I'm trying to split my file in two, using Seqkit, but it is not working.. using the command sample, I can generate a file that contains 80%…
Comment: split fasta file to train deep learning model
by
pinheirofabiano
▴
10
thank you very much for your comment, @Mensur
My file is just a list of peptides, not a complete genome
Comment: March 13-16: Virtual Nextflow and nf-core training event in 5 languages
by
Maxime Garcia
▴
220
All the videos are now online and organized in 5 different playlists on the nf-core youtube channel: https://www.youtube.com/@nf-core/playl…
Answer: What is the difference between agilent_wholegenome and agilent_wholegenome_4x44k
by
Mike Smith
★
2.0k
We can take a look at the content of those three attributes to try and figure this out. Here's some code to extract each set of Agilent ID…
Traffic: 2326 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6