1
vote
0
replies
127
views
1
vote
1
reply
214
views
1
vote
7
replies
412
views
1
vote
4
replies
253
views
updated 6 days ago by
Ram
40k
•
written 6 days ago by
_quantum_girl_
▴
10
1
vote
4
replies
259
views
6 days ago by
langziv
▴
50
1
vote
5
replies
256
views
updated 2 days ago by
GenoMax
135k
•
written 5 days ago by
sperezilvia
▴
10
1
vote
3
replies
280
views
5 days ago by
synat.keam
▴
80
1
vote
1
reply
156
views
1
vote
2
replies
553
views
1
vote
2
replies
300
views
updated 6 days ago by
Adrian Altenhoff
★
1.1k
•
written 12 days ago by
Ksel
•
0
1
vote
3
replies
1.1k
views
updated 1 day ago by
Paula Andrea
•
0
•
written 2.4 years ago by
Vic
▴
90
1
vote
4
replies
868
views
updated 1 day ago by
Ram
40k
•
written 21 months ago by
kristina.mahan
▴
160
1
vote
4
replies
408
views
1
vote
3
replies
920
views
updated 1 day ago by
Ram
40k
•
written 2.1 years ago by
kristina.mahan
▴
160
1
vote
4
replies
1.5k
views
updated 1 day ago by
Ram
40k
•
written 2.2 years ago by
kristina.mahan
▴
160
1
vote
1
reply
226
views
updated 5 days ago by
Zhenyu Zhang
▴
980
•
written 5 days ago by
Luke
▴
10
0
votes
0
replies
58
views
updated 9 hours ago by
Ram
40k
•
written 11 hours ago by
Bioinfonext
▴
440
0
votes
0
replies
62
views
updated 9 hours ago by
Ram
40k
•
written 14 hours ago by
yamamoto.yasuyuki.n6
•
0
0
votes
0
replies
68
views
0
votes
0
replies
57
views
updated 8 hours ago by
Ram
40k
•
written 11 hours ago by
ayaosama2111
▴
10
0
votes
2
replies
153
views
0
votes
2
replies
118
views
updated 7 hours ago by
benformatics
3.8k
•
written 9 hours ago by
paulaotero.sanchez
•
0
0
votes
3
replies
287
views
0
votes
4
replies
285
views
0
votes
3
replies
193
views
updated 6 days ago by
Jordan M Eizenga
▴
360
•
written 6 days ago by
Qi
•
0
0
votes
2
replies
151
views
6 hours ago by
jachimowicz9002
▴
10
0
votes
1
reply
143
views
0
votes
0
replies
47
views
5 hours ago by
avelarbio46
▴
30
0
votes
0
replies
33
views
4 hours ago by
v.berriosfarias
▴
130
0
votes
1
reply
68
views
0
votes
0
replies
41
views
updated 4 hours ago by
Ram
40k
•
written 6 hours ago by
carlopecoraro2
★
2.4k
0
votes
1
reply
450
views
updated 4 hours ago by
Ram
40k
•
written 5 months ago by
rocio.castellanos
•
0
0
votes
1
reply
221
views
0
votes
9
replies
224
views
0
votes
4
replies
102
views
0
votes
2
replies
1.4k
views
updated 5 days ago by
bk11
★
1.4k
•
written 2.4 years ago by
sidrah.maryam
▴
50
0
votes
1
reply
104
views
0
votes
1
reply
43
views
2 hours ago by
睿紘
•
0
0
votes
3
replies
726
views
0
votes
0
replies
158
views
updated 5 days ago by
Ram
40k
•
written 5 days ago by
Manuel Sokolov Ravasqueira
▴
100
0
votes
0
replies
14
views
1 hour ago by
qudrat.nii
•
0
0
votes
10
replies
231
views
0
votes
0
replies
151
views
0
votes
0
replies
150
views
0
votes
1
reply
197
views
0
votes
1
reply
192
views
0
votes
0
replies
140
views
5 days ago by
optimistsso4co3
▴
100
0
votes
0
replies
137
views
0
votes
3
replies
222
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
São Paulo, 4 minutes ago
Canada, 4 minutes ago
United States, 8 minutes ago
United States, 8 minutes ago
Peru, 12 minutes ago
Sydney, Australia., 20 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
130
Popular Question to
avelarbio46
▴
30
Popular Question to
Bioinfonext
▴
440
Popular Question to
hemantcnaik
•
0
Recent Replies
Answer: Converting from BED to SAF/GFF
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Comment: Convert bed12 to GFF
by
alejandrogzi
▴
30
Now there is [bed2gff](https://github.com/alejandrogzi/bed2gff), if you want to work only with a gff file!
Comment: Converting different annotation file formats (GTF/GFF/BED) to each other
by
alejandrogzi
▴
30
now there is also [bed2gff](https://github.com/alejandrogzi/bed2gff) if you want to convert .bed files to .gff3 files!
Answer: How Do I Convert From Bed Format To Gff Format?
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Answer: tensorQTL interaction issue
by
Solal
•
0
Writing a solution for anyone interested.
The issue stems from a dosage error, some variant contains only heterozygous individuals and no h…
Answer: The Biostar Handbook. A bioinformatics e-book for beginners.
by
Qboy
•
0
Great book! I love using it to help my mentees to learn bioinformatics better. It would be also fantastic to compile all other necessary Pr…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Thanks.
I'll try.
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
avelarbio46
▴
30
Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
Comment: Kimura% of calcDivergenceFromAlign output
by
睿紘
•
0
For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
Correct. Data that went into the assembly.
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Total bases (number of reads * read length) should be calculated after removal of adapters, right?
Traffic: 1666 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6