226
votes
39
replies
285k
views
33 follow
65
votes
3
replies
281k
views
275
votes
29
replies
267k
views
25 follow
updated 10 months ago by
Ram
40k
•
written 10.9 years ago by
sohadb1357
▴
630
327
votes
92
replies
226k
views
58 follow
updated 8 weeks ago by
kalavattam
▴
190
•
written 12.7 years ago by
Biomed
4.9k
43
votes
24
replies
201k
views
25 follow
updated 18 months ago by
matthew.pace
▴
60
•
written 9.8 years ago by
Arpitha Hebbar
▴
210
62
votes
14
replies
190k
views
9 follow
12
votes
6
replies
187k
views
updated 3.1 years ago by
zx8754
11k
•
written 5.7 years ago by
hassanlou110
▴
40
118
votes
31
replies
187k
views
17 follow
updated 2.0 years ago by
GenoMax
135k
•
written 13.5 years ago by
Eric Normandeau
11k
151
votes
42
replies
177k
views
22 follow
updated 16 months ago by
Ram
40k
•
written 11.6 years ago by
Obi Griffith
20k
130
votes
19
replies
176k
views
13 follow
282
votes
39
replies
174k
views
29 follow
197
votes
21
replies
171k
views
12 follow
updated 10 months ago by
Istvan Albert
98k
•
written 12.9 years ago by
Andrea_Bio
★
2.8k
142
votes
14
replies
167k
views
16 follow
updated 3.9 years ago by
Renesh
★
2.1k
•
written 13.5 years ago by
Pierre Lindenbaum
157k
124
votes
13
replies
166k
views
13 follow
163
votes
8
replies
166k
views
updated 14 months ago by
Ram
40k
•
written 10.8 years ago by
lyz10302012
▴
450
135
votes
18
replies
163k
views
16 follow
updated 9 months ago by
katieostrouchov
▴
20
•
written 9.8 years ago by
timjoncooper
▴
320
93
votes
39
replies
142k
views
19 follow
229
votes
38
replies
140k
views
29 follow
updated 3 months ago by
Ram
40k
•
written 10.6 years ago by
Malachi Griffith
19k
360
votes
81
replies
140k
views
34 follow
10
votes
4
replies
133k
views
updated 12.2 years ago by
Stefano Berri
4.4k
•
written 12.2 years ago by
Don
▴
20
146
votes
31
replies
132k
views
26 follow
updated 9 weeks ago by
Ram
40k
•
written 11.6 years ago by
Anima Mundi
★
2.9k
129
votes
32
replies
126k
views
29 follow
13
votes
8
replies
125k
views
7 follow
23
votes
9
replies
124k
views
8 follow
updated 7 months ago by
Ram
40k
•
written 8.4 years ago by
juan.rosas1
▴
70
762
votes
163
replies
123k
views
106 follow
updated 6 hours ago by
Biostar
2.0k
•
written 6.8 years ago by
Istvan Albert
98k
161
votes
52
replies
122k
views
28 follow
26
votes
10
replies
122k
views
119
votes
25
replies
121k
views
12 follow
98
votes
9
replies
120k
views
11 follow
updated 17 months ago by
henry-keen
▴
40
•
written 10.0 years ago by
newDNASeqer
▴
750
66
votes
18
replies
116k
views
14 follow
3
votes
3
replies
116k
views
46
votes
10
replies
114k
views
8 follow
115
votes
21
replies
112k
views
14 follow
updated 11.5 years ago by
Aditya Joshi
▴
30
•
written 11.9 years ago by
Niek De Klein
★
2.6k
119
votes
7
replies
112k
views
76
votes
25
replies
108k
views
14 follow
91
votes
10
replies
106k
views
11 follow
28
votes
8
replies
105k
views
7 follow
100
votes
34
replies
105k
views
23 follow
updated 1 day ago by
Jorge Amigo
14k
•
written 11.3 years ago by
GPR
▴
390
100
votes
15
replies
104k
views
15 follow
updated 7 months ago by
Genetics
▴
20
•
written 11.4 years ago by
GouthamAtla
12k
118
votes
15
replies
103k
views
15 follow
updated 12.7 years ago by
Mona Mohamed
•
0
•
written 12.9 years ago by
Terence
▴
210
64
votes
9
replies
102k
views
10 follow
288
votes
33
replies
99k
views
25 follow
updated 7 months ago by
Ram
40k
•
written 9.9 years ago by
Obi Griffith
20k
31
votes
8
replies
96k
views
8 follow
121
votes
56
replies
95k
views
24 follow
170
votes
41
replies
92k
views
27 follow
43
votes
8
replies
91k
views
updated 3.7 years ago by
onestop_data
▴
330
•
written 6.3 years ago by
ggman
▴
80
97
votes
19
replies
91k
views
12 follow
updated 13 months ago by
Ram
40k
•
written 13.6 years ago by
Giovanni M Dall'Olio
28k
173
votes
30
replies
90k
views
17 follow
85
votes
16
replies
90k
views
9 follow
updated 10 months ago by
bhanu.chandra1
▴
50
•
written 8.5 years ago by
Prakki Rama
★
2.7k
Recent Votes
Recent Locations •
All
India, 2 minutes ago
India, 6 minutes ago
United States, 9 minutes ago
Canada, 11 minutes ago
South Korea, 12 minutes ago
Indiana University, 17 minutes ago
San Francisco, 18 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
130
Popular Question to
avelarbio46
▴
30
Popular Question to
Bioinfonext
▴
440
Popular Question to
hemantcnaik
•
0
Recent Replies
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
Kevin Blighe
86k
It is difficult for me to comment, as I am not too informed on your IT infrastructure. What I can say is that it would be better to run the…
Answer: Converting from BED to SAF/GFF
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Comment: Convert bed12 to GFF
by
alejandrogzi
▴
30
Now there is [bed2gff](https://github.com/alejandrogzi/bed2gff), if you want to work only with a gff file!
Comment: Converting different annotation file formats (GTF/GFF/BED) to each other
by
alejandrogzi
▴
30
now there is also [bed2gff](https://github.com/alejandrogzi/bed2gff) if you want to convert .bed files to .gff3 files!
Answer: How Do I Convert From Bed Format To Gff Format?
by
alejandrogzi
▴
30
I recently developed [bed2gff](https://github.com/alejandrogzi/bed2gff) to quickly convert .bed files to a gff3 format, a tool written in R…
Answer: tensorQTL interaction issue
by
Solal
•
0
Writing a solution for anyone interested.
The issue stems from a dosage error, some variant contains only heterozygous individuals and no h…
Answer: The Biostar Handbook. A bioinformatics e-book for beginners.
by
Qboy
•
0
Great book! I love using it to help my mentees to learn bioinformatics better. It would be also fantastic to compile all other necessary Pr…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Thanks.
I'll try.
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
avelarbio46
▴
30
Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
Comment: Kimura% of calcDivergenceFromAlign output
by
睿紘
•
0
For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
Correct. Data that went into the assembly.
Traffic: 1364 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6