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109 results • Page
2 of 3
Sort: Rank
Rank
Views
Votes
Replies
2
votes
3
replies
5.6k
views
How to get the abundance of genes in metagenomes from MG RAST
abundance
mg-rast
metagenome
updated 9 hours ago by
Ram
37k • written 8.3 years ago by
khorms
▴ 220
0
votes
3
replies
1.7k
views
access to dataset in insilicodb
R
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
Shamim Sarhadi
▴ 220
11
votes
11
replies
4.7k
views
SNP calling pipeline - testing different programs
SNP
mapping
calling
filtering
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
Eric Normandeau
11k
2
votes
2
replies
2.0k
views
Resources for genome-wide maps of transcription factor binding sites?
cistrome
transcription-factor-binding-site
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
Alexander Skates
▴ 370
0
votes
1
reply
3.0k
views
Getting genbank annotation file from JGI
jgi
genbank
gff
annotation
updated 13 hours ago by
Ram
37k • written 7.7 years ago by
bioPiraten
▴ 10
2
votes
4
replies
3.2k
views
VariantRecalibrator in GATK
alignment
sequence
next-gen-sequencing
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
897598644
▴ 100
1
vote
0
replies
2.0k
views
Definition of splicing eQTLs in RNA-Seq and arrays
genome
RNA-Seq
snp
updated 13 hours ago by
Ram
37k • written 7.7 years ago by
User 7754
▴ 250
0
votes
1
reply
2.4k
views
OpenSNP and SNP position information
OpenSNP
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
bfeeny
▴ 50
0
votes
5
replies
2.4k
views
Question: How to compare the gene expression signature of Primary tumor cell and normal cancer cell
genome
gene expression
Page
updated 13 hours ago by
Ram
37k • written 7.8 years ago by
Naresh
▴ 60
2
votes
3
replies
4.6k
views
What is the definition of LOC# identifier?
gene-symbol
annotation
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
aleix.arnau1990
▴ 10
2
votes
6
replies
4.8k
views
Make fasta file from SNPs in two vcf files
fasta
vcf
phylogenetic
SNP
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
sun.nation
▴ 130
5
votes
4
replies
3.3k
views
converting the format of read files in GEO datasets (SRA) to fasta and fatsq
RNA-seq
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
fi1d18
★ 4.1k
7
votes
7
replies
3.2k
views
Extract PMIDs from a gene or protein ID
pubmed
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
shelly.deforte
▴ 190
1
vote
1
reply
1.1k
views
More MUMmer questions
alignment
genome
updated 12 hours ago by
Ram
37k • written 7.7 years ago by
skbrimer
▴ 690
0
votes
1
reply
4.3k
views
Convert exonerate output to EVM gff3 format error
evidencemodeler
evm
gff3
exonerate
updated 14 hours ago by
Ram
37k • written 7.7 years ago by
sun.nation
▴ 130
0
votes
0
replies
2.9k
views
bowtie2 output all aligned reads from paired alignment (even unconcordant pairs or single reads)
Assembly
bowtie2
SAM
alignment
BAM
updated 14 hours ago by
Ram
37k • written 7.7 years ago by
JV
▴ 450
6
votes
5
replies
2.7k
views
Why does BWA give different Mapping Quality to identical reads?
bwa
mapping quality
alignment
updated 13 hours ago by
Ram
37k • written 7.7 years ago by
Asdp
▴ 40
2
votes
7
replies
6.6k
views
Bowtie2 run out of memory
software-error
alignment
bowtie2
updated 13 hours ago by
Ram
37k • written 7.7 years ago by
anon
▴ 50
28
votes
14
replies
37k
views
8 follow
Running and Analyzing fastqc on multiple fastq files
next-gen
RNA-Seq
genome
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
ravi.uhdnis
▴ 220
1
vote
6
replies
5.4k
views
How to Normalize the Microarray Data Obtained from ncbi?
microarray
normalization
ncbi
Bioconductor
R
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
pankajnarula84
▴ 10
2
votes
2
replies
4.2k
views
Tool:
Budapest Reference Connectome: a 3D visualization tool to browse connections in the human brain
connectome
neuroscience
brain
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
Csaba Kerepesi
▴ 340
2
votes
2
replies
1.8k
views
what is applications of gene ranking except GSEA?
gene ranking
GSEA
updated 13 hours ago by
Ram
37k • written 7.7 years ago by
Zhilong Jia
★ 2.1k
5
votes
1
reply
2.4k
views
JAVA and NGS
next-gen
JAVA
updated 13 hours ago by
Ram
37k • written 7.8 years ago by
niharraul
• 0
0
votes
1
reply
1.6k
views
Getting BLAST Clusters Classifier performance for Protein classes
proteins
machine-learning
sequence
blast
updated 13 hours ago by
Ram
37k • written 7.8 years ago by
ddofer
▴ 30
8
votes
9
replies
3.5k
views
Forum:
Web Development for Bioinformatics
studies
advice
career
updated 14 hours ago by
Ram
37k • written 7.8 years ago by
edsanhu
▴ 10
5
votes
4
replies
4.2k
views
How to interpret vcf FORMAT more accurately?
next-gen
genome
alignment
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
mangfu100
▴ 780
3
votes
5
replies
3.1k
views
How to use the the filters created from VariantFiltration while using Annovar?
NGS
Annovar
Annotation
VariantFiltration
snps
updated 14 hours ago by
Ram
37k • written 7.7 years ago by
deepue
▴ 150
2
votes
7
replies
3.4k
views
BLAST search against a EST database
blast
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
fi1d18
★ 4.1k
8
votes
10
replies
3.6k
views
What to do when reads pairs are almost same,like 90-100 % overlap each other in paired reads?
pre-processing
NGS
next-gen
hla
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
crivenster
▴ 50
0
votes
1
reply
550
views
Blog:
Nature Communications: Who defines lifespan ?
gene
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
wangx407
• 0
0
votes
3
replies
2.2k
views
Limma, lmFit, array weight
R
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
jl.juluan
• 0
11
votes
8
replies
3.8k
views
R programming: genotype concordance
R
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
MAPK
★ 2.0k
0
votes
1
reply
2.3k
views
encode project .bb annotation files
epigenome-roadmap
encode
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
janeshen91
• 0
40
votes
10
replies
32k
views
7 follow
Can'T Locate Vcf.Pm Vcftools
vcftools
vcf
updated 11 hours ago by
Ram
37k • written 11.2 years ago by
Deniz
▴ 210
5
votes
3
replies
9.0k
views
STRUCTURE software for GBS SNP data
software-error
SNP
updated 11 hours ago by
Ram
37k • written 7.9 years ago by
dinesh
▴ 50
1
vote
2
replies
1.7k
views
Difference between PasaFly and Butterfly in Trinity
Butterfly
RNA-Seq
PasaFly
Trinity
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
figuerm
• 0
1
vote
1
reply
3.1k
views
Mauve Genome Alignment software
next-gen-sequencing
alignment
Assembly
updated 11 hours ago by
Ram
37k • written 7.9 years ago by
Rahul
▴ 30
2
votes
3
replies
6.6k
views
Multiple sequence alignment of sequenecs of different length
multiple-sequence-alignment
updated 11 hours ago by
Ram
37k • written 7.7 years ago by
rosies
• 0
1
vote
5
replies
5.5k
views
Statistical tests for RPKM comparison
RPKM
differential-gene-expression
updated 12 hours ago by
Ram
37k • written 7.7 years ago by
rpjl1230
▴ 20
1
vote
4
replies
2.2k
views
Search for a "standard" PWM for Kozak Sequence
genome
motif
kozak
updated 12 hours ago by
Ram
37k • written 8.3 years ago by
mbio.kyle
▴ 380
0
votes
3
replies
2.7k
views
cuffdiff was killed without any information?
RNA-Seq
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
i19870503
▴ 10
28
votes
21
replies
5.5k
views
7 follow
Bash tutorial for biologists?
bash
updated 8 hours ago by
Ram
37k • written 7.7 years ago by
Parham
★ 1.6k
2
votes
12
replies
4.1k
views
Adding barcodes to forward and reverse reads after sequencing
obitools
barcoding
next-gen-sequencing
updated 12 hours ago by
Ram
37k • written 7.7 years ago by
cmogren
▴ 20
2
votes
1
reply
1.4k
views
de novo workflow
alignment
sequencing
genome
updated 9 hours ago by
Ram
37k • written 7.8 years ago by
skbrimer
▴ 690
4
votes
9
replies
3.5k
views
Inquiry: How to parse blast.txt standard output?
blast
python
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
hlyates
▴ 10
0
votes
2
replies
2.8k
views
Bismark out put in IGV
IGV
bisulfite-seq
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
kanwarjag
★ 1.2k
0
votes
4
replies
2.2k
views
Maker Pipeline blast results
Annotation
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
zgayk
▴ 90
4
votes
2
replies
1.8k
views
ATP = ADP + ATP_base? What is ATP_base?
atp_base
metabolism
atp
updated 9 hours ago by
Ram
37k • written 7.7 years ago by
jolespin
▴ 140
5
votes
7
replies
7.5k
views
[solved] Retrieve fasta from balst db using blastdbcmd: Error: gi|742519789: OID not found
software error
blast
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
dago
★ 2.7k
3
votes
2
replies
2.0k
views
How to evaluate the statistical significance of distribution of breakpoints between two datasets.
statistic
updated 10 hours ago by
Ram
37k • written 7.7 years ago by
alec_djinn
▴ 380
109 results • Page
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> there is a massive difference in performance between them. It still is taking only one minute.
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