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810 results • Page 3 of 17
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Job: Machine/Deep Learning Research Scientist at UNC Charlotte, NC, USA
machine-learning statistics R python RNA-Seq
updated 1 day ago by 39k • written 3.6 years ago by ▴ 430
0
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0
replies
1.5k
views
Job: PhD position available on Microbiome Ecology and Evolution. Madrid, Spain
PhD evolution genomics doctoral-degree
updated 1 day ago by 39k • written 3.5 years ago by ▴ 140
1
vote
1
reply
1.5k
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Job: PhD student in Computer Science and Bioinformatics (R1)
Barcelona network machine-learning PhD
updated 6 days ago by 39k • written 3.9 years ago by ▴ 20
1
vote
0
replies
1.5k
views
Job: Bioinformatics PhD position in Next Generation Sequencing analysis
metagenomics illumina minion
updated 6 days ago by 39k • written 3.9 years ago by 4.9k
6
votes
13
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1.5k
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News: Ensembl reduced functionality: 10th March-16th April 2020
BLAT VEP Ensembl service
updated 1 hour ago by 39k • written 3.3 years ago by ★ 2.2k
0
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0
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1.5k
views
Job: PhD Student position in Systems Biology and Bioinformatics @ UAB (Birmingham, AL)
Networks data-analysis RNA-Seq
updated 5 days ago by 39k • written 3.8 years ago by • 0
1
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2
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1.5k
views
Megahit Assembly - command line error
assembly fastq megahit
updated 6 days ago by 39k • written 3.9 years ago by • 0
0
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8
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1.5k
views
Chromosome Location of Sequence in Fasta File using Biopython
biopython python
updated 1 day ago by 39k • written 3.5 years ago by • 0
22
votes
12
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1.5k
views
6 follow
Forum: What were the most impactful Bioinformatics papers published this year
papers publications
updated 1 day ago by 39k • written 3.5 years ago by ▴ 510
21
votes
15
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1.5k
views
9 follow
Forum: Working abroad without a PhD
career
updated 2 days ago by 39k • written 3.7 years ago by ★ 1.4k
0
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0
replies
1.5k
views
Job: Bioinformatics Analyst - Stoke Therapeutics, Inc, Bedford MA, USA
aws web-application ngs
updated 1 day ago by 39k • written 3.6 years ago by ★ 2.1k
0
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0
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1.5k
views
Job: Junior Software Engineer, Computational Genomics Platform
uc-santa-cruz UCSC engineer genomics
updated 6 days ago by 39k • written 3.9 years ago by ▴ 30
10
votes
7
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1.5k
views
Forum: Is trimming always better?
RNA-Seq QC trimmomatic trimming
updated 6 days ago by 39k • written 4.0 years ago by ▴ 330
1
vote
1
reply
1.5k
views
Job: Bioinformatics Systems Analyst
ucsc sys-analyst genomics
updated 5 days ago by 39k • written 3.8 years ago by ▴ 30
7
votes
6
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1.4k
views
Forum: Bioinformaticians - Am I on the Right Track?
Career
updated 1 day ago by 39k • written 3.5 years ago by ▴ 70
3
votes
0
replies
1.4k
views
Job: American Museum of Natural History - Bioinformatics Specialist
genomics
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
1
vote
3
replies
1.4k
views
Is there any tool available for sequence alignment concatenation and supermatrix file generation other than Fastconcat-G?
Assembly alignment software-error
updated 1 day ago by 39k • written 3.6 years ago by ▴ 100
0
votes
2
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1.4k
views
How to perform statistical analysis of label free experiment using results from Proteome Discoverer?
Proteome-Discoverer Label-Free Proteomics
updated 2 days ago by 39k • written 4.5 years ago by ▴ 80
3
votes
1
reply
1.4k
views
Performing Hmmer search against pfam versus UniRef100
hmmer pfam alignment
updated 5 days ago by 39k • written 3.8 years ago by • 0
0
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1
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1.4k
views
News: :: FINALL CALL :: RNA-Seq Data Analysis Workshop for Beginners - Registraion to be closed
NGS RNA-Seq Training
updated 1 day ago by 39k • written 3.5 years ago by 9.9k
0
votes
0
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1.4k
views
Job: Bioinformatics Analyst at University of Minnesota
RNA-Seq Variant-calling
updated 1 day ago by 39k • written 3.5 years ago by • 0
4
votes
0
replies
1.4k
views
Job: PhD studentship in bioinformatics: Network Inference and Systems Biology
network-biology
updated 4 hours ago by 39k • written 3.4 years ago by ▴ 40
0
votes
0
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1.4k
views
Job: Postdoc / PhD student comparative genomics / population genomics of plant pathogens, Munich Germany
assembly R Nanopore next-gen
updated 4 hours ago by 39k • written 3.4 years ago by • 0
1
vote
0
replies
1.4k
views
Job: Bioinformatics Analyst I-II, Prostate Cancer Program - Fred Hutch (Seattle, WA)
seattle research
updated 4 days ago by 39k • written 3.7 years ago by ▴ 10
0
votes
0
replies
1.4k
views
Job: Data Scientist Outreach Coordinator at Computercraft (NCBI/NIH) in Bethesda, MD
outreach hackathon code-a-thon
updated 1 day ago by 39k • written 3.5 years ago by ▴ 90
3
votes
3
replies
1.4k
views
Error in installation of RandFold 2.0
Linux rna-seq Ubuntu
updated 2 days ago by 39k • written 3.7 years ago by ▴ 30
0
votes
0
replies
1.4k
views
Job: Bioinformatics Postdoc or Analyst position at Geisinger Research, Danville PA
postdoc next-gen analyst
updated 1 day ago by 39k • written 3.5 years ago by 8.2k
0
votes
0
replies
1.4k
views
Job: Software Engineer, UCSC Genomics Institute
Genomics UCSC Programmer Engineer
updated 4 days ago by 39k • written 3.8 years ago by ▴ 30
1
vote
0
replies
1.4k
views
Job: Scientist - Genomics & Proteomics at the Chan Zuckerberg Biohub (San Francisco, CA)
proteomics genomics software sequencing
updated 2 days ago by 39k • written 3.6 years ago by ▴ 10
2
votes
0
replies
1.4k
views
Job: Senior Scientist (Curator) - CIViC Editor at McDonnell Genome Institute (Washington University, St Louis USA)
civic biocuration cancer genomics
updated 2 days ago by 39k • written 3.7 years ago by 20k
0
votes
0
replies
1.4k
views
Job: PhD Position in Statistical Phylogenetics (Species Tree Estimation)
modeling Bayesian-statistics phylogenetics
updated 5 days ago by 39k • written 3.8 years ago by ▴ 10
0
votes
0
replies
1.4k
views
Job: Bioinformatician / Biostatistician (Gladstone Institutes - San Francisco, CA)
UCSF Statistics RNA-Seq next-gen
updated 6 days ago by 39k • written 3.9 years ago by ▴ 960
2
votes
0
replies
1.4k
views
Job: Postdoctoral Scientist Position in Computational Biology at University of Missouri
scRNAseq postdoc ChIP-Seq
updated 2 hours ago by 39k • written 3.3 years ago by 20k
0
votes
0
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1.4k
views
Job: American Museum of Natural History Postdoctoral Fellowships in Bioinformatics and Computational Biology
human-health biomedicine
updated 1 day ago by 39k • written 3.6 years ago by ▴ 20
2
votes
1
reply
1.4k
views
Job: Bioinformatics scientist positions in Lund Sweden (last day application)
bioinformatician
updated 4 days ago by 39k • written 3.8 years ago by 7.9k
0
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0
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1.4k
views
Job: Post Doctoral Researcher-- Bioinformatics Biomedical Engineering
postDoc
updated 1 day ago by 39k • written 3.4 years ago by • 0
0
votes
0
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1.4k
views
Job: Research Software Engineer in Genomics -- Brown University, Providence, Rhode Island
Software-Development Computational-biology
updated 1 day ago by 39k • written 3.5 years ago by ▴ 50
4
votes
13
replies
1.3k
views
Forum: Looking for Participants: Meenta NovaSeq RunShare Beta
RunShare next-gen NovaSeq
updated 6 days ago by 39k • written 3.9 years ago by ▴ 10
4
votes
0
replies
1.3k
views
Job: Four 4-year PhD studentships @ the Van de Peer Lab (VIB-UGent, Ghent, Belgium)
PhD evolution genomics
updated 4 days ago by 39k • written 3.7 years ago by 14k
0
votes
4
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1.3k
views
Job: PhD position in translational clinical implementation of metagenomics
minion bench_to_bedside ngs
updated 6 days ago by 39k • written 3.9 years ago by 4.9k
0
votes
1
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1.3k
views
Job: Bioinformatics Scientist/Programmer, Clinical Cancer Genomics Laboratory at UCSF
next-gen-sequencing R snp RNA-Seq
updated 4 hours ago by 39k • written 3.4 years ago by ▴ 20
2
votes
1
reply
1.3k
views
Job: Bioinformatics Scientist (North Bethesda, MD)
genetics computational-biology
updated 4 hours ago by 39k • written 3.4 years ago by • 0
0
votes
0
replies
1.3k
views
Job: Job opportunity at EMBL: Biological Data Analyst - Statistician
biostatistics data-analysis statistician
updated 5 days ago by 39k • written 3.8 years ago by ▴ 30
0
votes
0
replies
1.3k
views
Job: Scientist (Computational Biology)
cancer-genomics next-gen R computational-biology
updated 1 day ago by 39k • written 3.5 years ago by • 0
3
votes
3
replies
1.3k
views
Bridge Amplification error rate and duplicates in NGS
NGS PCR-duplicates bridge-pcr next-gen
updated 6 days ago by 39k • written 3.9 years ago by ▴ 20
1
vote
0
replies
1.3k
views
Job: Variant Analyst-Genomics at UAB, Birmingham, Alabama
variant-analyst exome disease genomics
updated 2 days ago by 39k • written 3.7 years ago by ▴ 10
3
votes
4
replies
1.3k
views
Job: GSK Data Strategy & Design Expert
NGS DATA R GSK
updated 3 hours ago by 39k • written 3.3 years ago by ▴ 40
0
votes
0
replies
1.3k
views
Job: Offering a bioinformatics post Doc/PhD position for clinical cancer epigenomics (Berlin, Germany)
dna-methylation machine-learning
updated 2 hours ago by 39k • written 2.7 years ago by • 0
0
votes
1
reply
1.3k
views
Job: Bioinformatics Scientist at Synthetic Genomics, Inc (San Diego, CA)
genomics ngs
updated 6 days ago by 39k • written 4.0 years ago by ▴ 30
1
vote
2
replies
1.3k
views
Job: Postdocs @ New York City: Long Reads based Epigenomics, Metagenomics and Transcriptomics
microbiome genome RNA-Seq sequencing
updated 2 days ago by 39k • written 3.6 years ago by ▴ 120
810 results • Page 3 of 17
Recent Votes
Answer: Saving results from yeastgenome.org blastp search
Comment: RNASeq gene labeling and mRNA filter from bulkRNA data.
Answer: Saving results from yeastgenome.org blastp search
Comment: snps from empty well, Illumina Sequencing
Extract sequences from a fastq file by a list of IDs
Answer: Extract sequences from a fastq file by a list of IDs
Answer: Differences in GTF files hg19 and hg38
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Recent Replies
Comment: CellRanger problem by GenoMax 130k
And how much memory do you have assigned for this job? Likely you do not have enough memory for this process.
Comment: VCF file CSQ flag by Ram 39k
> a g.VCF file A `.vcf` file or a `gvcf` file?
Comment: CellRanger problem by Ram 39k
What is the cellranger command you're using?
Comment: RNASeq gene labeling and mRNA filter from bulkRNA data. by Yeeshouw • 0
I see, I believe I was running an older version or have missed the option, I have updated to v2.10.5 and can see this option now. Thank you…
Answer: Saving results from yeastgenome.org blastp search by GenoMax 130k
Looks like yeastgenome site does not provide a way to export or save the results in any other format. You could do the search over at NCBI …
Answer: Differences in GTF files hg19 and hg38 by GenoMax 130k
Not sure where you got your GTF for GRCh38 from but [**one from GENCODE**][1] has the level info you are looking for. chr1 HAVANA…
Comment: CHiP-Seq Questions by B.N. • 0
Thank you for the suggestions Dr. Stark.
Comment: Diff Bind Questions by B.N. • 0
Thank you so much for the insight Dr. Stark!
Comment: Is PanCan data microarray or rna-seq by GenoMax 130k
This particular example ("GeneChip") is an array. Early TCGA samples may have been done using arrays and later sequenced. Appears to be thi…
Comment: ChatGPT optimized for bioinformatics questions by Sasha ▴ 280
Hoping to add functionality around this. Stay tuned. Big problem for our space that needs to be resolved.
Comment: Is PanCan data microarray or rna-seq by solarchan7 • 0
Hi, so this [paper](https://www.nature.com/articles/s41598-019-45165-4) uses the TCGA dataset and in the supplementary information, it ment…
Comment: counts matrix should be numeric, currently it has mode: character when using a c by Darked89 4.4k
Since the input file is named `normalized.csv` and the values look like floats most likely the counts have been already normalized somehow.
Comment: Embryo transcriptome by Basti ★ 1.6k
https://www.ebi.ac.uk/ena/browser/view/PRJEB11202 https://www.ebi.ac.uk/ena/browser/view/PRJNA153427
Comment: ChatGPT optimized for bioinformatics questions by ATpoint 72k
How is it trained on PubMed/papers? One major drawback of ChatGPT is that it wildly makes up papers that do not even exist but with great c…
Answer: sgRNA design by ATpoint 72k
gRNAs are single-stranded and by this they have a strand-specificity (depends where the PAM is) and that gives them an orientation.
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