0
votes
2
replies
179
views
0
votes
2
replies
178
views
3
votes
6
replies
173
views
1
vote
1
reply
167
views
0
votes
2
replies
166
views
updated 13 hours ago by
Matthias Zepper
4.1k
•
written 1 day ago by
4fzcgueyp5
•
0
0
votes
1
reply
162
views
updated 6 days ago by
Basti
★
1.7k
•
written 7 days ago by
oduduabasi.isaiah
•
0
0
votes
0
replies
158
views
updated 5 days ago by
Ram
40k
•
written 5 days ago by
Manuel Sokolov Ravasqueira
▴
100
1
vote
1
reply
154
views
0
votes
2
replies
152
views
0
votes
0
replies
151
views
0
votes
0
replies
150
views
0
votes
2
replies
149
views
5 hours ago by
jachimowicz9002
▴
10
0
votes
1
reply
146
views
updated 2 days ago by
Radu Tanasa
▴
60
•
written 2 days ago by
fifty_fifty
▴
60
0
votes
1
reply
143
views
0
votes
0
replies
140
views
5 days ago by
optimistsso4co3
▴
100
0
votes
1
reply
138
views
0
votes
0
replies
137
views
0
votes
0
replies
128
views
2 days ago by
Hashirama
▴
20
0
votes
0
replies
128
views
updated 2 days ago by
Pierre Lindenbaum
157k
•
written 2 days ago by
sooni
▴
10
1
vote
0
replies
127
views
0
votes
0
replies
126
views
2 days ago by
carlopecoraro2
★
2.4k
0
votes
1
reply
123
views
updated 1 day ago by
Ram
40k
•
written 1 day ago by
avinash.dhar
•
0
0
votes
0
replies
120
views
0
votes
1
reply
120
views
0
votes
0
replies
119
views
0
votes
2
replies
115
views
updated 7 hours ago by
benformatics
3.8k
•
written 8 hours ago by
paulaotero.sanchez
•
0
2
votes
3
replies
107
views
0
votes
1
reply
107
views
updated 16 hours ago by
Pierre Lindenbaum
157k
•
written 18 hours ago by
Athena
•
0
0
votes
0
replies
104
views
0
votes
0
replies
103
views
0
votes
0
replies
100
views
0
votes
1
reply
90
views
0
votes
4
replies
84
views
3
votes
2
replies
89
views
5 hours ago by
synat.keam
▴
80
0
votes
1
reply
88
views
0
votes
0
replies
67
views
0
votes
1
reply
63
views
0
votes
0
replies
61
views
updated 8 hours ago by
Ram
40k
•
written 14 hours ago by
yamamoto.yasuyuki.n6
•
0
0
votes
0
replies
57
views
updated 8 hours ago by
Ram
40k
•
written 11 hours ago by
Bioinfonext
▴
440
0
votes
0
replies
56
views
updated 8 hours ago by
Ram
40k
•
written 10 hours ago by
ayaosama2111
▴
10
0
votes
0
replies
44
views
4 hours ago by
avelarbio46
▴
30
0
votes
0
replies
39
views
updated 3 hours ago by
Ram
40k
•
written 5 hours ago by
carlopecoraro2
★
2.4k
0
votes
1
reply
30
views
2 hours ago by
睿紘
•
0
0
votes
0
replies
28
views
4 hours ago by
v.berriosfarias
▴
130
0
votes
0
replies
12
views
1 hour ago by
qudrat.nii
•
0
0
votes
0
replies
11
views
54 minutes ago by
Prasanna
•
0
Recent Votes
Recent Locations •
All
Ireland, just now
Slovakia, 10 minutes ago
United States, 11 minutes ago
Tel Aviv, 14 minutes ago
Australia, 15 minutes ago
United States, 23 minutes ago
United States, 23 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
130
Popular Question to
avelarbio46
▴
30
Popular Question to
Bioinfonext
▴
440
Popular Question to
hemantcnaik
•
0
Recent Replies
Answer: tensorQTL interaction issue
by
Solal
•
0
Writing a solution for anyone interested.
The issue stems from a dosage error, some variant contains only heterozygous individuals and no h…
Answer: The Biostar Handbook. A bioinformatics e-book for beginners.
by
Qboy
•
0
Great book! I love using it to help my mentees to learn bioinformatics better. It would be also fantastic to compile all other necessary Pr…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Thanks.
I'll try.
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
avelarbio46
▴
30
Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
Comment: Kimura% of calcDivergenceFromAlign output
by
睿紘
•
0
For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
Correct. Data that went into the assembly.
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Total bases (number of reads * read length) should be calculated after removal of adapters, right?
Comment: Getting BLAST to give output whilst running
by
Ken
•
0
If I understand correctly, Blast can tell you how many results it has gotten but it can't tell you how many it is going to get, therefore i…
Comment: Understanding mother and father alleles in VCF file
by
Ram
40k
I don't understand your logic. You don't know what phasing is but are confident it is not required, and your proof is that relatives were d…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
It's from Nebula genomics. It must be possible to deduce parental alleles, since I converted the VCF file into a Myheritage VCF file and th…
Traffic: 2149 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6