65
votes
3
replies
281k
views
65
votes
25
replies
14k
views
12 follow
updated 11 weeks ago by
Marquis
•
0
•
written 4.6 years ago by
Phil Ewels
★
1.3k
65
votes
9
replies
48k
views
7 follow
64
votes
24
replies
2.5k
views
12 follow
updated 4 months ago by
Ram
40k
•
written 5.0 years ago by
Molecular_genetics
▴
80
64
votes
8
replies
8.0k
views
7 follow
updated 7 months ago by
Ram
40k
•
written 10.4 years ago by
Obi Griffith
20k
64
votes
9
replies
102k
views
10 follow
64
votes
5
replies
7.0k
views
10 follow
Tutorial:
Informatics of RNA-Seq.
updated 11 months ago by
Ram
40k
•
written 8.1 years ago by
GouthamAtla
12k
64
votes
26
replies
12k
views
7 follow
Tutorial:
Parallel processing in R
updated 6 months ago by
Ram
40k
•
written 6.0 years ago by
Kevin Blighe
86k
64
votes
29
replies
15k
views
15 follow
64
votes
19
replies
21k
views
12 follow
updated 10 months ago by
Ram
40k
•
written 13.1 years ago by
Aaronquinlan
12k
63
votes
28
replies
3.4k
views
11 follow
updated 5 months ago by
Ram
40k
•
written 7.4 years ago by
ablanchetcohen
★
1.2k
63
votes
9
replies
3.7k
views
updated 7 months ago by
Ram
40k
•
written 10.3 years ago by
Istvan Albert
98k
63
votes
27
replies
26k
views
18 follow
updated 7 months ago by
Ram
40k
•
written 10.9 years ago by
Click downvote
▴
720
63
votes
11
replies
15k
views
9 follow
updated 7 months ago by
Ram
40k
•
written 10.2 years ago by
Malachi Griffith
19k
62
votes
14
replies
189k
views
9 follow
62
votes
22
replies
60k
views
16 follow
62
votes
95
replies
17k
views
8 follow
62
votes
16
replies
33k
views
18 follow
62
votes
17
replies
33k
views
7 follow
updated 7 months ago by
Ram
40k
•
written 8.4 years ago by
xinhui.wang
▴
520
62
votes
24
replies
40k
views
12 follow
61
votes
6
replies
9.2k
views
61
votes
15
replies
13k
views
updated 4 months ago by
Ram
40k
•
written 5.0 years ago by
finswimmer
16k
61
votes
70
replies
12k
views
21 follow
Forum:
Biostar 2.0 released
updated 7 months ago by
Ram
40k
•
written 9.5 years ago by
Istvan Albert
98k
61
votes
29
replies
6.9k
views
14 follow
updated 8 months ago by
Ram
40k
•
written 8.4 years ago by
Manu Prestat
4.1k
61
votes
51
replies
21k
views
9 follow
61
votes
14
replies
19k
views
13 follow
61
votes
16
replies
7.1k
views
14 follow
updated 8 months ago by
Samuel Lampa
★
1.3k
•
written 2.9 years ago by
shenwei356
8.2k
60
votes
2
replies
7.1k
views
updated 7 months ago by
Ram
40k
•
written 11.1 years ago by
Istvan Albert
98k
60
votes
18
replies
3.5k
views
10 follow
updated 7 months ago by
Ram
40k
•
written 13.2 years ago by
Andrewjgrimm
▴
460
60
votes
21
replies
2.9k
views
14 follow
60
votes
52
replies
41k
views
23 follow
60
votes
28
replies
7.6k
views
27 follow
updated 6 months ago by
Ram
40k
•
written 9.0 years ago by
Istvan Albert
98k
60
votes
3
replies
32k
views
60
votes
12
replies
38k
views
10 follow
updated 10 months ago by
jamesogilvie1
•
0
•
written 7.7 years ago by
rioualen
▴
710
60
votes
17
replies
32k
views
16 follow
updated 9 months ago by
Ram
40k
•
written 10.2 years ago by
Carlos Borroto
★
2.1k
60
votes
14
replies
11k
views
16 follow
updated 7 months ago by
Ram
40k
•
written 6.5 years ago by
WouterDeCoster
47k
59
votes
43
replies
19k
views
18 follow
59
votes
31
replies
4.1k
views
12 follow
updated 5 months ago by
Ram
40k
•
written 6.7 years ago by
David Langenberger
10k
58
votes
25
replies
38k
views
15 follow
Tutorial:
Protocol To Downlad TCGA Data From GDC
updated 6 months ago by
Ram
40k
•
written 7.2 years ago by
Shicheng Guo
★
9.3k
57
votes
15
replies
5.6k
views
9 follow
57
votes
19
replies
27k
views
6 follow
updated 7 months ago by
Ram
40k
•
written 10.9 years ago by
David Langenberger
10k
57
votes
9
replies
5.4k
views
14 follow
updated 5 months ago by
Ram
40k
•
written 7.4 years ago by
Shicheng Guo
★
9.3k
57
votes
15
replies
4.4k
views
9 follow
Forum:
Entice Biologists To Learn R
updated 7 months ago by
Ram
40k
•
written 12.0 years ago by
Madelaine Gogol
5.3k
57
votes
43
replies
15k
views
8 follow
56
votes
22
replies
23k
views
7 follow
updated 6 months ago by
Kevin Blighe
86k
•
written 4.0 years ago by
Arindam Ghosh
▴
510
56
votes
23
replies
4.5k
views
10 follow
56
votes
7
replies
7.5k
views
8 follow
updated 6 weeks ago by
Kevin Blighe
86k
•
written 5.5 years ago by
elmahy2005
▴
150
56
votes
19
replies
3.7k
views
9 follow
Forum:
How to apply for a job
56
votes
25
replies
3.7k
views
8 follow
updated 3 months ago by
Ram
40k
•
written 3.1 years ago by
telroyjatter
▴
210
56
votes
4
replies
66k
views
Recent Votes
Recent Locations •
All
Taiwan, just now
Sweden, 6 minutes ago
United States, 8 minutes ago
United States, 11 minutes ago
United States, 11 minutes ago
India, 13 minutes ago
Hong Kong, 14 minutes ago
Recent Awards •
All
Popular Question to
bharata1803
▴
550
Scholar to
Mensur Dlakic
★
25k
Popular Question to
morovatunc
▴
550
Popular Question to
fi1d18
★
4.2k
Popular Question to
julianneradford
▴
20
Recent Replies
Answer: Fetch Fastq files directly for SRA data
by
Rob
6.2k
What is the accession for the project? Many — though not all — of the projects present in the NCBI SRA are also hosted in the European Nuc…
Comment: Dataset's name in BioMart for S. pombe
by
YUYANG.OON
•
0
Works with `useMart(biomart="fungi_mart", dataset="spombe_eg_gene", host="https://fungi.ensembl.org")`
Comment: Bug of vg surject
by
Jordan M Eizenga
▴
360
This is still hard to interpret without the commands. What would help is if you literally copied the full UNIX commands along with their re…
Comment: Which function is best for pathway analysis?
by
Chris
▴
180
Thank you for your reply! Do you have code that I and others can implement? I am not sure how to customize the gmt file from my differentia…
Comment: Bug of vg surject
by
Qi
•
0
Thanks your reply!
my resulte show below:
5x_pan_sv.bam 1347587601 #converted from gam to bam F1 indel=0.830392 snp=0.932511
5…
Comment: Bug of vg surject
by
Jordan M Eizenga
▴
360
It might help us to diagnose the problem if you included the exact commands that you used and showed the results that you are concerned abo…
Answer: Which function is best for pathway analysis?
by
Yogi
▴
20
Few things to mention.
Pathway Enrichment Analysis can be split into two categories.
1. Functional Class Scoring Methods
2. Overrepr…
Answer: identify DEGs across all conditions and per specific conditions
by
Yogi
▴
20
Couple of things.
(Feel free to correct if I'm misunderstanding).
"DESeq2" is meant for 1v1 comparisons.
If you're trying to compar…
Comment: Hisat2 index and alignment question
by
Istvan Albert
98k
yes correct you have to pass the full prefix and not the directory
Comment: Low Alignment rate
by
dsull
★
4.7k
Wow! Didn't realize the repeat-masked file could have such a large influence on alignment. Very good to know -- I guess I'll need to dive i…
Comment: Troubles launch IGV on Linux(Debian)
by
morovatunc
▴
550
Disclaimer: My comment could be totally unrelated. I would give these a try if you have noone comment/answer your problem.
I have had this…
Comment: How to check RNAseq support for annotated genes?
by
Michael
53k
> I tried it using STAR to map the transcript to the annotation gtf file
That is not what STAR is for. STAR is for aligning short reads in…
Comment: Low Alignment rate
by
Mehwish
•
0
Thanks alot! This worked out for me https://ftp.ensembl.org/pub/release-110/fasta/homo_sapiens/dna/Homo_sapiens.GRCh38.dna.toplevel.fa.gz …
Comment: Violin plot (Monocle 3) - Troubleshooting
by
Ram
40k
The error message tells me there is the possibility of a conflicting function called `plot_genes_violin` that accepts one parameter and err…
Comment: Violin plot (Monocle 3) - Troubleshooting
by
bk11
★
1.2k
I m not sure why you have problem there. I do not encounter any problem. May be your gene list are not present in your source object. Pleas…
Traffic: 1402 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6