15
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7
replies
19k
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83
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20
replies
19k
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17 follow
updated 9 months ago by
Peter Karp
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30
•
written 13.5 years ago by
Shigeta
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470
39
votes
6
replies
19k
views
28
votes
11
replies
19k
views
9 follow
updated 11 months ago by
Ram
43k
•
written 12.6 years ago by
Jeroen Van Goey
2.3k
24
votes
15
replies
19k
views
7 follow
14
votes
17
replies
19k
views
6 follow
updated 3 months ago by
DareDevil
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4.3k
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written 8.2 years ago by
dina.hesham139
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170
38
votes
21
replies
19k
views
8 follow
20
votes
16
replies
19k
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6 follow
28
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7
replies
19k
views
6 follow
written 4.8 years ago by
rokragna295
▴
60
8
votes
6
replies
19k
views
176
votes
46
replies
19k
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26 follow
5 months ago by
Istvan Albert
100k
26
votes
9
replies
19k
views
8 follow
updated 10 months ago by
abhilashdasari.10
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30
•
written 11.4 years ago by
Alex Paciorkowski
3.5k
83
votes
34
replies
19k
views
22 follow
updated 10 months ago by
adelheidkratzer
•
0
•
written 5.8 years ago by
egeulgen
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1.3k
38
votes
26
replies
18k
views
16 follow
written 8.2 years ago by
biostart
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370
15
votes
9
replies
18k
views
8 follow
updated 5 months ago by
Mark
★
1.5k
•
written 6.2 years ago by
juan.crescente
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110
3
votes
8
replies
18k
views
updated 3 months ago by
xiaoleiusc
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140
•
written 6.6 years ago by
KVC_bioinfo
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590
13
votes
7
replies
18k
views
updated 4 months ago by
xiaoleiusc
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140
•
written 5.7 years ago by
Glory Basumata
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140
6
votes
5
replies
18k
views
7 follow
51
votes
6
replies
18k
views
updated 11 months ago by
kmzhou4
•
0
•
written 10.9 years ago by
Sangwoo Kim
▴
420
13
votes
13
replies
18k
views
9 follow
updated 11 days ago by
ummeswaiba
•
0
•
written 10.3 years ago by
biostar
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170
38
votes
12
replies
18k
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8 follow
updated 7 weeks ago by
Alex Reynolds
35k
•
written 7.7 years ago by
bioinformatics.cancer
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260
1
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2
replies
18k
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17
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10
replies
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6
votes
9
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18k
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12
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11
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17k
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updated 8 months ago by
mg
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250
•
written 7.7 years ago by
radwa.raed
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40
21
votes
11
replies
17k
views
updated 9 months ago by
Chris
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260
•
written 9.5 years ago by
user123456
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180
65
votes
24
replies
17k
views
14 follow
updated 6 months ago by
Ram
43k
•
written 14.1 years ago by
Pierre Lindenbaum
161k
8
votes
6
replies
17k
views
updated 11 months ago by
Ram
43k
•
written 6.4 years ago by
Ahmed Youssef
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70
9
votes
10
replies
17k
views
8 follow
20
votes
10
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17
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8 follow
12
votes
11
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35
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17
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16k
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12 follow
Tutorial:
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updated 11 months ago by
GenoMax
141k
•
written 10.4 years ago by
Obi Griffith
20k
10
votes
8
replies
16k
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6 follow
27
votes
6
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16k
views
updated 9 months ago by
Ram
43k
•
written 11.8 years ago by
Istvan Albert
100k
30
votes
18
replies
16k
views
8 follow
updated 5 months ago by
Ram
43k
•
written 14.1 years ago by
Khader Shameer
18k
21
votes
6
replies
16k
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47
votes
15
replies
16k
views
10 follow
7
votes
11
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16k
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11 follow
updated 9 months ago by
microecologist93
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20
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written 5.1 years ago by
dongchenchen
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30
35
votes
10
replies
16k
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11 follow
15
votes
34
replies
16k
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10 follow
21
votes
7
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16k
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6 follow
updated 3 months ago by
Adam Taranto
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40
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written 8.4 years ago by
marcela.uliano
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90
7
votes
14
replies
16k
views
7 follow
updated 9 months ago by
Ram
43k
•
written 11.8 years ago by
Istvan Albert
100k
68
votes
25
replies
16k
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12 follow
updated 5 months ago by
GenoMax
141k
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written 5.1 years ago by
Phil Ewels
★
1.4k
28
votes
4
replies
15k
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updated 10 months ago by
Ram
43k
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written 7.7 years ago by
thomaskuilman
▴
850
15
votes
11
replies
15k
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updated 4 months ago by
sativus
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20
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written 9.6 years ago by
dirigible2012
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320
12
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10
replies
15k
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6 follow
updated 10 weeks ago by
Ram
43k
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written 5.8 years ago by
blooming.daisy333
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110
9
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13
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15k
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49
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18
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15k
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updated 5 months ago by
Ram
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written 14.1 years ago by
Roderic Page
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390
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Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
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Ram
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> so a single Rscript could utilise multiple environments and versions
How is that sane, let alone "better"? Also, why use `snap` for curl…
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Normalized how?
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With public data one has to work with what is there. If the information about position is absent then only thing that could be done is to l…
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BioinfGuru
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Or better yet. To have an R package that allows access to conda environments via "conda list env" so that environments can be switched with…
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If GPT is right then it says that:
> The specific gene responsible for the orange and non-orange (black or
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As far as I know the Orange locus hasn't been mapped to a gene. Maybe this paper will help in narrowing the search: https://www.ncbi.nlm.ni…
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Luka
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0
>Curios if there a reference for this?
[Apparently it's not deprecated yet][1], but will be soon and the SRA intends for it to be at some …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
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I prefer RStudio for new projects as well. The moment I need versions though, RStudio becomes a burden. I wish one could launch RStudio fro…
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According to ChatGPT: The gene responsible for the orange and black patches of fur in calico cats (and tortoiseshell cats) is the X-linked …
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
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BioinfGuru
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Certainly true. Switching versions is way simpler that way, at the cost of the familiarity of the Rstudio IDE - especially if the code is w…
Comment: Duplicate marking, read names, and the SRA
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> fastq-dump is deprecated
Curios if there a reference for this? `fasterq-dump` seems to allow for parallel streams but `fastq-dump` is st…
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by
Luka
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>In many cases those remain recoverable using the -F option when you dump the data (cloud download not required)
The -F option (or any equ…
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GenoMax
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To be specific, not every dataset in SRA loses the original identifiers. In many cases those remain recoverable using the `-F` option when …
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To use different versions of R and bioconductor, you don't really need RStudio. One can simply create new conda environments with the requi…
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BioinfGuru
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Done. Thank you.
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