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930 results • Page
1 of 19
Sort: replies
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Views
Votes
Replies
8
votes
25
replies
1.9k
views
construction of a database
sql
noSQL
neo4j
database
updated 11 days ago by
Ram
38k • written 22 months ago by
Debut
▴ 20
9
votes
20
replies
3.2k
views
Solve SAM issues flagged by Picard's ValidateSamFile
Picard
SAM
updated 10 days ago by
Ram
38k • written 4.6 years ago by
marongiu.luigi
▴ 680
0
votes
16
replies
1.4k
views
How to convert ncbi gff file to ensembl gff format
bcftools
gff
updated 11 days ago by
Ram
38k • written 7 months ago by
yoser4
▴ 10
9
votes
16
replies
2.9k
views
6 follow
covert SAM to full length fasta
fasta
SAM
updated 10 days ago by
Ram
38k • written 4.6 years ago by
marongiu.luigi
▴ 680
7
votes
16
replies
2.0k
views
Insert size selection for RNASeq data: does it make sense?
RNA-Seq
sequencing
updated 5 days ago by
Ram
38k • written 5.5 years ago by
Matteo Schiavinato
★ 3.6k
10
votes
15
replies
5.2k
views
convert fasta/gb to vcf
fasta
vcf
genbank
gff
updated 10 days ago by
Ram
38k • written 4.5 years ago by
marongiu.luigi
▴ 680
1
vote
15
replies
1.2k
views
Samtools merge Illumina and PB bam file empty
Illumina
samtools
Bam
PacBio
updated 10 days ago by
Ram
38k • written 2.6 years ago by
talbots
• 0
6
votes
13
replies
658
views
Error with STAR
STAR
updated 23 days ago by
Ram
38k • written 25 days ago by
Chris
▴ 70
6
votes
12
replies
1.2k
views
VCF files 101 - for people from non Bioinformatics Background
vcf
sequencing
genome
variant-calling
updated 19 days ago by
Ram
38k • written 2.6 years ago by
akshaykum684
▴ 20
8
votes
12
replies
2.5k
views
Use BLAST Command Line Applications to run a folder of many sequences against a database
BLAST
updated 15 days ago by
Ram
38k • written 19 months ago by
daver.v
▴ 30
6
votes
12
replies
1.1k
views
Good tutorials/textbooks/articles to introduce biomarker discovery to a biologist?
r
biomarker
updated 15 days ago by
Ram
38k • written 4.2 years ago by
english.server
▴ 290
0
votes
12
replies
1.5k
views
bedtools intersect issue
bed
bedtools
updated 10 days ago by
Ram
38k • written 4.6 years ago by
elisheva
▴ 120
2
votes
12
replies
568
views
how to get to a VCF from bam files
Mpileup
Samtools
BAM
bcftools
VCF
updated 8 days ago by
Ram
38k • written 10 days ago by
Human
• 0
5
votes
11
replies
3.0k
views
Convert Plink to Arlequin
software-error
plink
Arlequin
PGDSpider
updated 18 days ago by
Ram
38k • written 4.9 years ago by
HG
▴ 30
6
votes
11
replies
787
views
Calculate RPKM
RPKM
12 days ago by
Chris
▴ 70
2
votes
10
replies
5.9k
views
fq.gz file use
BioEdit
R
updated 15 days ago by
Ram
38k • written 4.1 years ago by
choi.yisoo.hi
• 0
2
votes
10
replies
1.2k
views
multiple FASTA sequnces in to one full sequnce according to their chromosome number
NGS
FASTA
bam
updated 15 days ago by
Ram
38k • written 4.1 years ago by
Anu
• 0
0
votes
10
replies
6.7k
views
Error: reads file does not look like a fastq file
fastq
bowtie2
ChIP-Seq
updated 15 days ago by
Ram
38k • written 6.6 years ago by
addilynn.beach
▴ 40
7
votes
10
replies
1.1k
views
col as names [solved]
R
updated 15 days ago by
Ram
38k • written 4.1 years ago by
demoraesdiogo2017
▴ 90
6
votes
9
replies
4.7k
views
Best Possible set of Python interview questions for Bioinformatics, that a recruiter can ask?
python
updated 12 days ago by
Ram
38k • written 8.0 years ago by
gaurav.singh
▴ 10
0
votes
9
replies
2.9k
views
MATLAB Volcano Plot
Microarray
r
RNA-Seq
genome
updated 18 days ago by
Ram
38k • written 5.1 years ago by
bikash2510
▴ 30
4
votes
9
replies
6.7k
views
bcftools consensus command
vcf
bcftools
updated 10 days ago by
Ram
38k • written 3.2 years ago by
Begonia_pavonina
▴ 90
2
votes
9
replies
1.9k
views
SAM file quality check without converting into BAM
Alignment
SAM
updated 10 days ago by
Ram
38k • written 3.8 years ago by
vaish01kv
• 0
0
votes
9
replies
3.2k
views
Viral integration with RNA-seq data
ngs
RNA-seq
updated 9 days ago by
Ram
38k • written 5.5 years ago by
KVC_bioinfo
▴ 570
0
votes
9
replies
1.5k
views
Microarray analysis in R - target.txt,file,Sample info
R
updated 10 days ago by
Ram
38k • written 18 months ago by
bioinformatics
▴ 10
1
vote
9
replies
2.6k
views
bam to fasta error using samtools
fasta
bam
updated 15 days ago by
Ram
38k • written 6.0 years ago by
christacaggiano
▴ 60
1
vote
8
replies
1.2k
views
Loading a pre-filtered loom file into pySCENIC
scRNA-seq
pySCENIC
loom
updated 11 days ago by
Ram
38k • written 7 months ago by
Jacob
• 0
0
votes
8
replies
5.1k
views
miRNA annotation from miRBase 21
miRBase
gene-annotation
next-gen
updated 23 days ago by
Ram
38k • written 8.5 years ago by
bioinforupesh2009.au
▴ 140
1
vote
8
replies
400
views
Merge vcfs and retain only specific regions
SNPs
vcf
updated 24 days ago by
Ram
38k • written 25 days ago by
Clovering
▴ 30
3
votes
8
replies
315
views
getting coding exon information from Ensembl API
Ensembl
API
updated 10 days ago by
Ram
38k • written 10 days ago by
Nobody
▴ 30
2
votes
8
replies
552
views
Depth of Coverage in Mitochondrial Genome with Samtools
samtools
depth-of-coverage
Mitochondrial-genome
13 days ago by
Lida
• 0
2
votes
8
replies
9.1k
views
Size of typical genomic data
genomic
updated 5 days ago by
Ram
38k • written 4.9 years ago by
Nicolas Rosewick
10k
1
vote
8
replies
1.8k
views
What is NCBI Gene ID, where to find it and how to convert to entrez ID?
RNA-Seq
updated 18 days ago by
Ram
38k • written 3.5 years ago by
mnazir
• 0
0
votes
7
replies
1.1k
views
Unable to convert from sam to bam file.
bam
sam
samtools
updated 11 days ago by
Ram
38k • written 14 months ago by
usef
• 0
6
votes
7
replies
4.4k
views
Creation Of A .Bed File From .Txt
plink
updated 5 days ago by
Ram
38k • written 9.2 years ago by
tom.d.brocklehurst
• 0
1
vote
7
replies
1.7k
views
Platypus variantcaller.c:16971 errpr
platypus
updated 12 days ago by
Ram
38k • written 4.2 years ago by
nuketbilgen
▴ 40
1
vote
7
replies
517
views
Wildcard error in Snakemake - clarification on inputs
python
Snakemake
variant-calling
28 days ago by
DdogBoss
• 0
7
votes
7
replies
532
views
Nextflow rnaseq finishing early
RNA-seq
nextflow
updated 4 days ago by
Ram
38k • written 4 days ago by
Raygozak
★ 1.4k
1
vote
7
replies
859
views
Splitting BED file by technical replicate or extract all unique barcodes
BED
updated 10 days ago by
Ram
38k • written 2.7 years ago by
summer_researcher
• 0
2
votes
7
replies
7.8k
views
linux 'cat' command merge fasta files without headers
fasta
linux
updated 26 days ago by
Ram
38k • written 8.8 years ago by
esterbuiate
• 0
6
votes
7
replies
1.1k
views
The size of the genome in pb of an organism before sequencing?
sequencing
genome
updated 5 days ago by
Ram
38k • written 4.4 years ago by
irg21
• 0
6
votes
7
replies
833
views
to mark the duplicates
Assembly
updated 19 days ago by
Ram
38k • written 3.8 years ago by
manubiomed20
▴ 10
1
vote
7
replies
1.2k
views
miRDeep2.pl cannot recognize reference fasta file
mirdeep2
fasta
mirna
mirdeep2.pl
mirna-sequencing
updated 15 days ago by
Ram
38k • written 3.1 years ago by
realnewbie
▴ 30
4
votes
7
replies
2.0k
views
How to move the files from sub folder and sub-sub folders into one other folder?
bash
updated 10 days ago by
Ram
38k • written 21 months ago by
mathavanbioinfo
▴ 70
1
vote
7
replies
2.0k
views
Kallisto | bustools workflow for fastq with R1 and R2 (forward and reverse)?
scRNA-seq
Kallisto
bustools
updated 19 days ago by
Ram
38k • written 3.5 years ago by
Farah
▴ 80
1
vote
7
replies
1.2k
views
From a gene list to pathways
RNA-Seq
gene
updated 19 days ago by
Ram
38k • written 3.0 years ago by
eleonora.vercesi
• 0
0
votes
7
replies
409
views
snpEff error when connecting to my built database
snpEff
25 days ago by
doggie
• 0
1
vote
7
replies
1.2k
views
Bulk download tomato RNA or cDNA sequences (partial) with genomic loci list
SGN
tomato
updated 9 days ago by
Ram
38k • written 5.0 years ago by
donger1103
▴ 10
1
vote
7
replies
291
views
error bbduk
linux
bbduk
java
updated 17 days ago by
lieven.sterck
14k • written 17 days ago by
Kárita
• 0
1
vote
7
replies
1.7k
views
Is anybody experiencing problems downloading from the SRA?
SRA
updated 9 days ago by
Ram
38k • written 2.4 years ago by
pomodoro_sinensis
▴ 90
930 results • Page
1 of 19
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