7
votes
12
replies
1.6k
views
2
votes
12
replies
1.7k
views
9 months ago by
Saurabh
•
0
6
votes
12
replies
2.0k
views
0
votes
12
replies
3.3k
views
updated 11 months ago by
Ram
43k
•
written 6.4 years ago by
fonteneaudam
▴
20
4
votes
12
replies
7.7k
views
6 follow
0
votes
12
replies
2.4k
views
3
votes
12
replies
473
views
0
votes
11
replies
1.6k
views
2
votes
11
replies
728
views
updated 7 weeks ago by
Michael
54k
•
written 8 weeks ago by
sainavyav22
•
0
4
votes
11
replies
606
views
5
votes
11
replies
986
views
2
votes
11
replies
5.2k
views
updated 3 months ago by
e.r.zakiev
▴
190
•
written 7.8 years ago by
CAnna
▴
20
0
votes
11
replies
1.1k
views
7 months ago by
evmae
•
0
2
votes
11
replies
1.0k
views
4 months ago by
sil_bioinfo
▴
40
5
votes
11
replies
1.3k
views
0
votes
11
replies
769
views
updated 4 weeks ago by
barslmn
★
2.1k
•
written 6 weeks ago by
avelarbio46
▴
30
1
vote
11
replies
1.2k
views
4
votes
11
replies
1.6k
views
updated 6 months ago by
Brian Bushnell
20k
•
written 8 months ago by
Y
•
0
4
votes
11
replies
1.7k
views
updated 8 months ago by
Kevin Blighe
87k
•
written 8 months ago by
Michelle Guerra
•
0
0
votes
11
replies
2.2k
views
updated 10 months ago by
Ram
43k
•
written 4.9 years ago by
saumya.sharma1509
•
0
2
votes
10
replies
3.2k
views
6 follow
2
votes
10
replies
785
views
0
votes
10
replies
922
views
1
vote
10
replies
964
views
5
votes
10
replies
836
views
1
vote
10
replies
1.2k
views
7 months ago by
prasundutta87
▴
660
0
votes
10
replies
584
views
17 days ago by
dzisis1986
▴
70
1
vote
10
replies
1.1k
views
0
votes
10
replies
843
views
3
votes
10
replies
1.2k
views
5
votes
10
replies
1.2k
views
1
vote
10
replies
1.7k
views
updated 6 months ago by
jeffhsu3
•
0
•
written 9 months ago by
fra.r.silvestro
▴
10
2
votes
10
replies
3.4k
views
14
votes
10
replies
880
views
4 months ago by
synat.keam
▴
100
1
vote
10
replies
3.1k
views
8
votes
10
replies
2.0k
views
10 months ago by
yoshifumimiya
▴
40
6
votes
10
replies
1.7k
views
8
votes
10
replies
652
views
0
votes
9
replies
463
views
21 days ago by
Jay
•
0
6
votes
9
replies
2.0k
views
updated 11 months ago by
Ram
43k
•
written 14 months ago by
luzglongoria
▴
50
0
votes
9
replies
544
views
0
votes
9
replies
1.5k
views
2
votes
9
replies
1.2k
views
4
votes
9
replies
1.1k
views
5 months ago by
Begonia_pavonina
▴
150
1
vote
9
replies
2.1k
views
updated 11 months ago by
dsull
★
5.8k
•
written 11 months ago by
micecanfly
▴
10
0
votes
9
replies
5.4k
views
0
votes
9
replies
828
views
1
vote
9
replies
843
views
updated 5 weeks ago by
Dave Carlson
★
1.7k
•
written 5 weeks ago by
Matthew
•
0
4
votes
9
replies
983
views
7
votes
9
replies
1.1k
views
updated 6 months ago by
svp
▴
680
•
written 6 months ago by
smrutimayipanda
▴
20
Recent Locations •
All
United States, just now
United States, 3 minutes ago
United States, 8 minutes ago
South Korea, 10 minutes ago
China, 13 minutes ago
United States, 13 minutes ago
Palau, 16 minutes ago
Recent Awards •
All
Popular Question to
yueli7
▴
250
Popular Question to
Chirag Parsania
★
2.0k
Commentator to
GenoMax
141k
Centurion to
jkbonfield
★
1.2k
Popular Question to
Randy H
▴
110
Recent Replies
Comment: Load a full GFF3 into annotation track using arrow (Apollo)
by
cmdcolin
★
3.8k
Hi there, I let a developer know of this thread and they said they can check it out next week. Feel free to post to the https://github.com/…
Comment: Removing duplicates
by
joe
▴
500
I'd try those OP @samuel recommends
My guess is you're new to ONT, fast5 is the 'raw data' which is current over time...other than generat…
Comment: RNA seq differential expression analysis
by
swbarnes2
14k
No. Find a tutorial, try it, then if you have specific questions, ask of the galaxy help site.
Comment: Downloaded pdb's on rcsb.org
by
Ram
43k
Sure. Or, one could do:
bash try.bash "Homo sapiens" AHR | xargs -I v_pdb curl -s -o v_pdb.pdb https://files.rcsb.org/view/v_pdb.pdb
Comment: Downloaded pdb's on rcsb.org
by
GenoMax
141k
This may be the best option.
Get the PDB ID's
$ ./get.sh "Mus musculus" AHR
4M4X
5NJ8
5V0L
8H77
Then use `curl` to g…
Comment: Downloaded pdb's on rcsb.org
by
Ram
43k
It gives you the first 25 results though. I'll see if I can change that.
EDIT: I've updated that number to 250. I'm hoping you won't need …
Answer: Downloaded pdb's on rcsb.org
by
Ram
43k
I'm going to build off of OP's query and give them a simple script:
```bash
organism=$(echo $1 | sed 's/ /%20/g')
gene=$2
curl -s https:/…
Comment: miRNAs quantification using mirdeep2 tool
by
GenoMax
141k
This question does not make complete sense. If you have your own data files why do you need deep sequencing reads?
Genome (can be download…
Comment: Downloaded pdb's on rcsb.org
by
GenoMax
141k
For a non-programmer using the search builder link included above may be the best option. Even that is not very user friendly.
Comment: Downloaded pdb's on rcsb.org
by
Ram
43k
That's how they seem to have written their query - automating that is a bit of a pain though as it takes a crazy JSON as input.
Comment: Downloaded pdb's on rcsb.org
by
GenoMax
141k
You can use the "Advanced query" builder (https://www.rcsb.org/search/advanced ) to create a query like:
https://www.rcsb.org/search?requ…
Traffic: 2031 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6