23
votes
22
replies
36k
views
6 follow
19
votes
15
replies
25k
views
8 follow
18
votes
19
replies
1.5k
views
6 follow
18
votes
7
replies
746
views
16
votes
38
replies
15k
views
14
votes
5
replies
2.6k
views
updated 11 months ago by
Ram
37k
•
written 8.2 years ago by
f.muoghalu
•
0
12
votes
8
replies
547
views
updated 4 months ago by
Matthias Zepper
2.9k
•
written 4 months ago by
A_heath
▴
120
12
votes
13
replies
2.1k
views
updated 8 weeks ago by
Ram
37k
•
written 7.6 years ago by
sarathkurichiyil
•
0
11
votes
9
replies
2.0k
views
updated 6 weeks ago by
Ram
37k
•
written 7.6 years ago by
QVINTVS_FABIVS_MAXIMVS
★
2.5k
10
votes
5
replies
6.1k
views
10
votes
2
replies
333
views
updated 10 months ago by
Ram
37k
•
written 10 months ago by
adyashapanda04
▴
10
10
votes
11
replies
8.1k
views
10
votes
8
replies
1.8k
views
9
votes
4
replies
5.2k
views
9
votes
2
replies
339
views
updated 4 months ago by
Mensur Dlakic
★
22k
•
written 4 months ago by
Deepak
•
0
9
votes
1
reply
5.3k
views
updated 5 months ago by
Ram
37k
•
written 7.3 years ago by
James Ashmore
★
3.4k
9
votes
7
replies
725
views
9
votes
9
replies
1.2k
views
updated 5 months ago by
appropiate
▴
80
•
written 6 months ago by
amy__
▴
50
9
votes
7
replies
652
views
9
votes
4
replies
1.9k
views
9
votes
1
reply
3.2k
views
updated 6 months ago by
Ram
37k
•
written 7.7 years ago by
Niek De Klein
★
2.6k
9
votes
14
replies
3.6k
views
updated 10 months ago by
Ram
37k
•
written 8.0 years ago by
hothriananya
▴
70
9
votes
4
replies
348
views
8
votes
11
replies
1.1k
views
8
votes
3
replies
4.9k
views
updated 6 months ago by
Ram
37k
•
written 7.1 years ago by
dharshank.1096
▴
30
8
votes
5
replies
11k
views
8
votes
4
replies
1.7k
views
8
votes
9
replies
2.0k
views
6 follow
updated 7 months ago by
rohitsatyam102
▴
690
•
written 3.2 years ago by
Eric Lim
★
2.0k
8
votes
9
replies
2.6k
views
8
votes
3
replies
445
views
8
votes
5
replies
3.0k
views
8
votes
6
replies
691
views
8
votes
20
replies
1.7k
views
7
votes
4
replies
963
views
6 months ago by
sunnykevin97
▴
970
7
votes
7
replies
1.0k
views
updated 6 months ago by
krushnach80
★
1.1k
•
written 9 months ago by
Maka
▴
20
7
votes
8
replies
1.6k
views
updated 3 days ago by
Ram
37k
•
written 7.7 years ago by
xiaofeng.dong12
▴
20
7
votes
10
replies
3.3k
views
updated 12 months ago by
Ram
37k
•
written 8.4 years ago by
Yongjie Zhang
▴
100
7
votes
4
replies
3.2k
views
7
votes
10
replies
3.7k
views
7
votes
8
replies
3.3k
views
7
votes
6
replies
2.1k
views
updated 11 months ago by
flyamer
▴
60
•
written 20 months ago by
abascalfederico
★
1.2k
7
votes
4
replies
1.3k
views
7
votes
5
replies
3.6k
views
7
votes
15
replies
4.4k
views
6 follow
updated 10 months ago by
lieven.sterck
14k
•
written 22 months ago by
sunnykevin97
▴
970
7
votes
9
replies
703
views
3 months ago by
Jjbox
▴
30
7
votes
4
replies
2.8k
views
7
votes
4
replies
931
views
7
votes
2
replies
3.1k
views
7
votes
8
replies
2.8k
views
updated 7 months ago by
krushnach80
★
1.1k
•
written 2.7 years ago by
kand3e
▴
50
7
votes
7
replies
920
views
updated 9 months ago by
cvenkat95
▴
10
•
written 9 months ago by
sarahawan92
▴
10
Recent Votes
Recent Locations •
All
Portugal, just now
United Kingdom, 2 minutes ago
Whitefish, MT, 4 minutes ago
ETH Zurich, 4 minutes ago
United States, 4 minutes ago
United States, 5 minutes ago
Oviedo, 5 minutes ago
Recent Awards •
All
Popular Question to
Matteo Schiavinato
★
3.6k
Popular Question to
Barry Digby
★
1.1k
Popular Question to
Lee Katz
★
3.1k
Scholar to
Nicolas Rosewick
10k
Popular Question to
Papyrus
★
2.3k
Recent Replies
Comment: Size of two scRNA-Seq conditions
by
Chris
▴
60
Thank you so much for your answer! Here is the structure of 2 matrix objects of two conditions. Condition 1 has 19760 cells meanwhile condi…
Answer: Mapping with bbmap.sh
by
Mensur Dlakic
★
22k
Definitely not normal.
It doesn't seem that BBmap is taking any reads in. That's why your `num reads` and `num bases` are all zeros, which…
Comment: how to get an average ROC curve after 10-fold cross validation in r
by
Mensur Dlakic
★
22k
I have no idea what cutoff is in this context, nor what you mean by `original` values.
I don't know how you got those values for means. I …
Comment: Protein protein interactions
by
Mensur Dlakic
★
22k
This is not a trivial calculation nor a simple sequence comparison like with BLAST, so it may take a while. Besides, there could be hundred…
Comment: snakemake Unexpected keyword bam in rule definition
by
Wayne
★
1.6k
Any chance it is an indentation issue that isn't caused by what you aren't sharing here? See [here](https://groups.google.com/g/snakemake/c…
Comment: Size of two scRNA-Seq conditions
by
rpolicastro
11k
More important would be the cell QC stats (such as reads per cell and number of unique features detected per cell), the number of cells per…
Answer: What type of database does gnomAD use?
by
Jeremy Leipzig
21k
If you primarily want a variant warehouse that supports genomic region and sample queries at biobank scale, you should look into [TileDB-VC…
Answer: Dealing with missing (NA) values in my 450K methylation array dataset
by
Basti
★
1.3k
You could omit the NA values : `pca <- prcomp(na.omit(t(exprs(GSE65820))))`
Comment: Filter InterProScan output for a specific function
by
jv
▴
790
I imagine you can filter on things like E.C. numbers and domain names using `bash`, `awk`, `R`, or some other code.
Comment: How to find the most frequent alternative-splicing event from DEXSEQ data?
by
STARDUST
•
0
I will try both rMATS and SUPPA for categorising changes. For the specific exons, i'm expecting the last exons should be affected. That is …
Answer: snp Caenorhabditis elegans
by
GenoMax
125k
See: https://www.elegansvariation.org/data/release/20220216
Answer: want the codes for cuffdiff , NIOSeq , bayseq to perform DEGs.
by
jv
▴
790
- NOISeq <https://www.bioconductor.org/packages/release/bioc/vignettes/NOISeq/inst/doc/NOISeq.pdf>
- Cuffdiff <http://cole-trapnell-lab.gi…
Comment: fastqc: Per base sequence content
by
jv
▴
790
I think this is to be expected based a report I was able to find online
<https://uu.diva-portal.org/smash/get/diva2:1608120/FULLTEXT01.pd…
Comment: fastqc: Per base sequence content
by
GenoMax
125k
Unless the kit directions tell you to remove remove the initial 10-15 bp you may as well leave them alone. Data should align would be my in…
Traffic: 3081 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6