0
votes
5
replies
486
views
0
votes
5
replies
313
views
2
votes
5
replies
1.6k
views
updated 17 days ago by
andorjkiss
▴
40
•
written 15 months ago by
javanokendo
▴
60
0
votes
5
replies
475
views
12 days ago by
marongiu.luigi
▴
710
0
votes
5
replies
312
views
13 days ago by
virginia.baraja
•
0
5
votes
5
replies
7.2k
views
updated 8 days ago by
veldahan86
•
0
•
written 3.8 years ago by
Assa Yeroslaviz
★
1.8k
0
votes
5
replies
402
views
0
votes
5
replies
1.2k
views
updated 9 days ago by
Ram
43k
•
written 6.4 years ago by
pablo61991
▴
90
0
votes
5
replies
462
views
27 days ago by
Learner
•
0
0
votes
5
replies
372
views
1
vote
5
replies
324
views
updated 8 days ago by
jkbonfield
★
1.2k
•
written 15 days ago by
sansan_96
▴
80
0
votes
5
replies
1.8k
views
updated 10 days ago by
Arup Ghosh
3.2k
•
written 3.4 years ago by
WhiteN8
•
0
2
votes
5
replies
346
views
0
votes
5
replies
361
views
15 days ago by
Srinka
▴
20
0
votes
4
replies
256
views
8 days ago by
njornet
▴
20
0
votes
4
replies
288
views
1
vote
4
replies
785
views
2
votes
4
replies
272
views
8 days ago by
synat.keam
▴
100
0
votes
4
replies
420
views
1
vote
4
replies
2.8k
views
updated 1 day ago by
Ram
43k
•
written 5.1 years ago by
grant.hovhannisyan
★
2.6k
3
votes
4
replies
3.4k
views
3
votes
4
replies
334
views
16 days ago by
Estevão
•
0
4
votes
4
replies
348
views
16 days ago by
newuser2024
•
0
2
votes
4
replies
272
views
2 days ago by
kirill.zaslavsky
•
0
0
votes
4
replies
304
views
2
votes
4
replies
1.4k
views
0
votes
4
replies
389
views
0
votes
4
replies
1.8k
views
updated 1 day ago by
Ram
43k
•
written 4.8 years ago by
jperezboza
▴
20
0
votes
4
replies
1.1k
views
0
votes
4
replies
456
views
0
votes
4
replies
318
views
0
votes
4
replies
320
views
2
votes
4
replies
2.6k
views
updated 9 days ago by
Ram
43k
•
written 8.0 years ago by
Chris Gene
▴
80
2
votes
4
replies
295
views
0
votes
4
replies
2.7k
views
updated 25 days ago by
axol0tl
•
0
•
written 6.5 years ago by
Xinwei Han
•
0
1
vote
4
replies
1.3k
views
1
vote
4
replies
270
views
updated 17 days ago by
BioinfGuru
★
1.7k
•
written 18 days ago by
Netanel
•
0
1
vote
4
replies
2.2k
views
1
vote
4
replies
2.4k
views
updated 1 day ago by
Ram
43k
•
written 4.8 years ago by
saksis.rihards
▴
10
1
vote
4
replies
373
views
updated 6 days ago by
BioinfGuru
★
1.7k
•
written 7 days ago by
Morteza
•
0
1
vote
4
replies
343
views
updated 13 days ago by
Ram
43k
•
written 11 weeks ago by
shwetamgr1
▴
10
2
votes
4
replies
375
views
updated 8 days ago by
GenoMax
141k
•
written 9 days ago by
pl.terzian
•
0
1
vote
4
replies
338
views
13 days ago by
diqixiaoyaoer
▴
10
0
votes
3
replies
440
views
0
votes
3
replies
327
views
0
votes
3
replies
257
views
0
votes
3
replies
1.8k
views
0
votes
3
replies
693
views
1
vote
3
replies
341
views
updated 17 days ago by
Pierre Lindenbaum
161k
•
written 19 days ago by
Max
•
0
2
votes
3
replies
247
views
Recent Locations •
All
Spain, 1 minute ago
Netherlands, 1 minute ago
Australia, 2 minutes ago
Berlin, 2 minutes ago
Kazakhstan, 3 minutes ago
Germany, 4 minutes ago
France, 4 minutes ago
Recent Awards •
All
Popular Question to
i.sudbery
19k
Popular Question to
biwdpang
•
0
Popular Question to
Michael
54k
Scholar to
Gordon Smyth
★
7.0k
Popular Question to
yueli7
▴
250
Popular Question to
Chirag Parsania
★
2.0k
Recent Replies
Comment: Ciriquant not configuring hisat2 indexed files
by
Atul K.
•
0
it worked. Thank you. Now my terminal is crashing, seems 16gb of RAM and 4 cores isn't enough. Can you suggest something?
Comment: Adding CB tag to bam file
by
Maria
•
0
I checked Picard ```AddOrReplaceReadsGroups``` and ```AddOATag```. Is that what you're referring to?
Comment: Free/open source 23andme-like analysis
by
Michael
54k
Noted that 'accurate' wasn't among your criteria ;)
Anyway, most variant callers are free open-source software. However, for ancestry ana…
Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
by
Pierre Lindenbaum
161k
> server so I cannot use Blat for this purpose.
blat is avilable as a standane tool: http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86…
Answer: Mapping cDNA sequence of a single gene to a genome not hosted at UCSC server (wi
by
b.contreras.moreira
▴
160
My favourite for this task would be [GMAP]( http://research-pub.gene.com/gmap ), which can produce GFF format with option `-f 2`.
It is…
Answer: Prediction of Ribosomal RNA Genes Using RNAmmer Software
by
colindaven
6.3k
Another alternative is the truly free implementation barrnap https://github.com/tseemann/barrnap. This is also installable via conda so qui…
Comment: Filtration Of Reads With Length Lower Than 30 From Bam
by
Hagen
▴
10
thanks! This saved me quite some time, I was about to write code to calculate the aligned length from the CIGAR. But this can be done with
…
Comment: Per base sequence content failed miserably
by
Kai Xin
•
0
will look into that. Thank you very much
Comment: Korean human genome reference file
by
SeoGyun
•
0
Thanks..... But I want to do imputation, so I have to make it as a vcf file, but the site only has a fatsa file....
Comment: miRNAs quantification using mirdeep2 tool
by
Ashok
•
0
thank you for your reply
https://github.com/rajewsky-lab/mirdeep2/blob/master/TUTORIAL.md
i saw this github tutorial for miRNA quantifica…
Comment: Load a full GFF3 into annotation track using arrow (Apollo)
by
cmdcolin
★
3.8k
Hi there, I let a developer know of this thread and they said they can check it out next week. Feel free to post to the https://github.com/…
Comment: Removing duplicates
by
joe
▴
510
I'd try those OP @samuel recommends
My guess is you're new to ONT, fast5 is the 'raw data' which is current over time...other than generat…
Comment: RNA seq differential expression analysis
by
swbarnes2
14k
No. Find a tutorial, try it, then if you have specific questions, ask of the galaxy help site.
Traffic: 2367 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6