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2
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1
answer
201
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1
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Reading in H5AD File from Human Cell Atlas
single-cell R rna-seq seurat h5ad written 6 weeks ago by Thorerges • 0 • updated 4 days ago by shohan4me • 0
0
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2
answers
569
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2
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clusterProfiler::enrichGO() is getting very slow
R clusterprofiler go written 12 months ago by sangram_keshari • 230 • updated 4 days ago by jgarces • 20
3
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1
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87
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1
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Fasta Files - How to search for peptide sequences?
R written 5 days ago by janainamace • 10 • updated 5 days ago by Alex Nesmelov • 110
0
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0
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42
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0
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scRNA seurat analyis: Count number of UMIs for specific gene within specific clusters.
R rna-seq written 5 days ago by dana.jensen • 0
0
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0
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121
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0
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clock mus musculus in r
R mus musculus written 5 days ago by _program • 0
5
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1
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3.0k
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1
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How To Download Data From Kegg Server Using R
R kegg written 8.2 years ago by Sagar Nikam • 160 • updated 5 days ago by Biostar ♦♦ 20
0
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0
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54
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0
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UCSC Xena Probe to Gene mapping
gene software error next-gen rna-seq R written 5 days ago by prithvi.mastermind • 0
0
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0
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38
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0
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Scaling and centering of SNP genotype data in .bed format in r for use in PCA?
pcadapt R pca snp bed written 5 days ago by bntjoanne • 10
0
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0
answers
73
views
0
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trying to read specific genomic regions from a bam file
software error R rna-seq written 5 days ago by alonziso • 0
2
votes
1
answer
89
views
1
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Converting Gene Symbol to Ensembl ID in R
gene R written 6 days ago by Harry_Wat • 0 • updated 5 days ago by Jean-Karim Heriche ♦ 22k
0
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0
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38
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0
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problem with BioMM package
R bioconductor machine learning genomics written 5 days ago by parra.sev • 0
0
votes
1
answer
112
views
1
answer
sc-ATAC pro downstream analysis in R
gene R chip-seq sequencing written 23 days ago by sidrah.maryam • 0 • updated 6 days ago by wbaopaul • 0
1
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0
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63
views
0
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Plotting GO annotation with R
R rna-seq written 6 days ago by Cordyline • 0
4
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0
answers
72
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0
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Error in example RNA-Seq Example
R deseq rna-seq handbook written 6 days ago by lextallan • 10
0
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0
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953
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0
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Remove Probes from Raw .CEL Files - AFFY HG-U133-Plus2.0
R rna-seq written 3.5 years ago by Alex Gibbs • 40 • updated 7 days ago by Biostar ♦♦ 20
0
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0
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87
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0
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BAM Header for ATAC-seq
R bam atac-seq written 4 weeks ago by sophia.dingg • 0 • updated 7 days ago by Biostar ♦♦ 20
0
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0
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59
views
0
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Why doesn't TCGA .rsem.isoforms.results have a length column?
R tcga rna-seq rsem alternative splicing written 9 days ago by majd.abdulghani • 10
0
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0
answers
78
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0
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R package 'survival' version problem
R written 8 days ago by cromero • 0
3
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1
answer
117
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1
answer
Loop to retrieve rsID out of chrID list
genome R biomart snp written 14 days ago by aroso491 • 0 • updated 8 days ago by Mike Smith • 1.5k
3
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2
answers
84
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2
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lift over gene ids rat to human
R biomart rna-seq written 12 days ago by sim.j.baum • 50 • updated 8 days ago by Mike Smith • 1.5k
0
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0
answers
77
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0
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Job: Postdoctoral Researcher in Cancer Biology and Genomics (Boston)
genomics cancer job spatial R single-cell written 8 days ago by rubendries • 10
0
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0
answers
51
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0
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Coloring cluster by cell type and parient id
R rna-seq umap written 9 days ago by no • 0
2
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1
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57
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1
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What does minoverlap = 1L means?
gene R annotatr written 9 days ago by rohitsatyam102 • 120 • updated 9 days ago by ATpoint ♦ 36k
0
votes
1
answer
123
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1
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Interaction Factors Removing All Variability
R deseq2 deseq rna-seq written 9 weeks ago by tyak9569 • 0 • updated 9 days ago by antonioggsousa • 480
0
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0
answers
48
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0
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[R] Issue for reading .cel file (affy, affyio, oligo, affxparser)
R affy cel written 9 days ago by GH_fr • 0 • updated 9 days ago by RamRS ♦ 27k
0
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0
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117
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0
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how to get distance of each SNPs to the transcripts' 5'UTR and 3'UTR?
genome R sequence snp sequencing written 11 weeks ago by mikysyc2016 • 70 • updated 9 days ago by Biostar ♦♦ 20
1
vote
1
answer
99
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1
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Pathways Analysis in R
pathways deg R written 10 days ago by GiuliaAC • 0 • updated 10 days ago by volidif659 • 0
0
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1
answer
64
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1
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How to process raw data (.cel files) from GEO and get annotation of genes
R rna-seq python written 10 days ago by ZENO3175 • 0 • updated 10 days ago by thind.amarinder • 20
0
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0
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43
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0
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comparison among the accumulation density curves
software error R written 10 days ago by Kyle • 80
1
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1
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71
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1
answer
stacked barplot color choice
R metagenomics 16s phyloseq written 10 days ago by DC7 • 20 • updated 10 days ago by antonioggsousa • 480
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