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65
votes
0
answers
52k
views
68 follow
0
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Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 5.6 years ago by Nicholas Spies • 1.1k • updated 9 months ago by RamRS ♦ 22k
134
votes
5
answers
18k
views
78 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 4.5 years ago by Parham • 1.4k • updated 2.8 years ago by hed.robin • 30
140
votes
4
answers
139k
views
65 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 7.3 years ago by Obi Griffith ♦ 17k • updated 2.8 years ago by jokipokemon0001 • 0
168
votes
17
answers
17k
views
36 follow
17
answers
Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
R bioconductor books written 9.2 years ago by Michael Dondrup ♦ 46k • updated 4.6 years ago by Parham • 1.4k
93
votes
1
answer
12k
views
76 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 19 months ago by Kevin Blighe ♦ 43k • updated 21 days ago by Gabriel • 20
47
votes
3
answers
11k
views
54 follow
3
answers
Tutorial: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Curve For Survival Analysis
R tutorial written 5.6 years ago by Nicholas Spies • 1.1k • updated 2.0 years ago by jmzeng1314 • 90
91
votes
12
answers
21k
views
33 follow
12
answers
Is There Any R Or R / Bioconductor Package That Can Make Circular Plots Like Perl / Circos
R visualization written 7.3 years ago by John • 1.5k • updated 4.3 years ago by Mo • 880
99
votes
8
answers
26k
views
68 follow
8
answers
How To Create Mutation Diagram In R Or In Any Tools?
domain R mutation written 6.4 years ago by henryvuong • 750 • updated 4 months ago by WouterDeCoster ♦ 39k
75
votes
2
answers
16k
views
36 follow
2
answers
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 3.3 years ago by Obi Griffith ♦ 17k • updated 10 months ago by avelarbio46 • 0
46
votes
0
answers
3.3k
views
54 follow
0
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 12 months ago by egeulgen • 730
65
votes
0
answers
9.4k
views
19 follow
0
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Tutorial: Heatmaps in R
R tutorial heatmap written 2.9 years ago by Jean-Karim Heriche ♦ 19k • updated 20 days ago by zx8754 ♦ 7.5k
50
votes
0
answers
22k
views
14 follow
0
answers
Tutorial: Creating Interactive Volcano Plots with R and Plot.ly
R tutorial plotly volcano plot written 2.7 years ago by steve • 2.0k • updated 14 months ago by mail2steff • 50
54
votes
2
answers
4.4k
views
41 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R next-gen tool karyoploter written 2.0 years ago by bernatgel • 1.9k • updated 13 months ago by Vijay Lakhujani ♦ 4.1k
37
votes
3
answers
57k
views
14 follow
3
answers
Clustering Data (Rna-Seq) Using R To Produce A Heatmap
gene R rna clustering heatmap written 7.6 years ago by Kanne • 410 • updated 4.2 years ago by Bohdan Khomtchouk • 320
34
votes
7
answers
26k
views
19 follow
7
answers
Pathway Analysis In R
pathway gene R written 7.6 years ago by Avoks • 140 • updated 2.2 years ago by theobroma22 • 1.1k
30
votes
2
answers
9.8k
views
2
answers
Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 2.7 years ago by martinguerrerog89 • 270 • updated 3 months ago by david.peeney • 20
59
votes
4
answers
33k
views
28 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 8.3 years ago by Stephen ♦ 2.7k • updated 2.5 years ago by ShirleyDai • 40
49
votes
1
answer
24k
views
20 follow
1
answer
Difference Between Mas5 And Rma Normalisation. Which Is More Appropriate When?
R microarray affymetrix data written 8.2 years ago by T. K. • 160 • updated 8.2 years ago by Neilfws ♦ 48k
38
votes
4
answers
9.5k
views
15 follow
4
answers
Packages For Visualization Of Biological Data In R
R visualization written 7.3 years ago by Malachi Griffith ♦ 17k • updated 7.2 years ago by Gjain ♦ 5.3k
24
votes
0
answers
2.8k
views
27 follow
0
answers
Tutorial: R functions for parallel processing
R tutorial biocparallel mclapply foreach written 21 months ago by Kevin Blighe ♦ 43k • updated 22 days ago by stephannie.baker8 • 0
23
votes
3
answers
13k
views
23 follow
3
answers
Probability of gene list overlap
gene R overlap written 7.5 years ago by Nasir • 160 • updated 13 months ago by Biostar ♦♦ 20
14
votes
2
answers
16k
views
8 follow
2
answers
Venndiagram Using R
R written 7.3 years ago by Robert Jenkins • 120 • updated 7.3 years ago by Ly • 130
49
votes
7
answers
21k
views
13 follow
7
answers
Heatmaps In R With Huge Data
R heatmap illumina written 7.4 years ago by Tonig • 430 • updated 7.4 years ago by Steve Lianoglou ♦ 5.0k
43
votes
5
answers
17k
views
25 follow
5
answers
Retrieve All Genes Associated With A Go Term
R bioconductor go gene-ontology written 6.8 years ago by enricoferrero • 770 • updated 18 months ago by EagleEye ♦ 6.4k
81
votes
8
answers
35k
views
34 follow
8
answers
Venn/Euler Diagram Of Four Or More Sets
R written 5.9 years ago by Hunter • 110 • updated 13 months ago by lequangminhtri • 30
42
votes
5
answers
4.6k
views
11 follow
5
answers
Makefile-Driven Workflows And Bioconductor Objects
R bioconductor pipeline workflow file written 6.4 years ago by gbayon • 160 • updated 5.4 years ago by tony.fischetti • 20
16
votes
5
answers
7.5k
views
9 follow
5
answers
Genome Wide Plots In [R]
R plot written 7.2 years ago by Zev.Kronenberg ♦ 11k • updated 7.2 years ago by bdemarest • 460
29
votes
3
answers
15k
views
12 follow
3
answers
How Can I Generate A Venn Diagram In R For A Given Csv File
R statistics written 6.1 years ago by Payal • 40 • updated 6.1 years ago by henryvuong • 750
25
votes
3
answers
13k
views
10 follow
3
answers
Tool: HeatmapGenerator: High performance RNAseq and microarray visualization software suite to examine differential gene expression levels using an R and C++ hybrid computational pipeline
microarray heatmap R c++ rna-seq tool written 4.5 years ago by Bohdan Khomtchouk • 320 • updated 4.4 years ago by mikhail.shugay ♦ 3.3k
15
votes
0
answers
7.3k
views
0
answers
Tutorial: How to create a mutation lolliplot with GenVisR
graphics bioconductor tutorial R genvisr written 3.0 years ago by Obi Griffith ♦ 17k • updated 2.8 years ago by mia1260 • 0
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