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104
votes
1
answer
19k
views
85 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 2.2 years ago by Kevin Blighe ♦ 54k
137
votes
5
answers
22k
views
82 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 5.2 years ago by Parham • 1.4k • updated 3.4 years ago by hed.robin • 30
66
votes
0
answers
56k
views
70 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 6.2 years ago by Nicholas Spies • 1.1k • updated 17 months ago by RamRS ♦ 25k
144
votes
4
answers
147k
views
69 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 8.0 years ago by Obi Griffith ♦ 18k • updated 7 months ago by sansritisinha • 0
100
votes
9
answers
28k
views
69 follow
9
answers
How To Create Mutation Diagram In R Or In Any Tools?
domain R mutation written 7.1 years ago by henryvuong • 770 • updated 11 weeks ago by zx8754 ♦ 9.0k
59
votes
0
answers
5.7k
views
68 follow
0
answers
Tutorial: Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 20 months ago by egeulgen • 980
50
votes
3
answers
11k
views
58 follow
3
answers
Tutorial: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Curve For Survival Analysis
R tutorial written 6.2 years ago by Nicholas Spies • 1.1k • updated 2.7 years ago by jmzeng1314 • 90
59
votes
2
answers
5.7k
views
45 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R ngs tool karyoploter written 2.7 years ago by bernatgel • 2.4k
50
votes
1
answer
4.9k
views
39 follow
1
answer
Tutorial: Parallel processing in R
R tutorial biocparallel mclapply foreach written 2.4 years ago by Kevin Blighe ♦ 54k
169
votes
17
answers
18k
views
36 follow
17
answers
Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
R bioconductor books written 9.9 years ago by Michael Dondrup ♦ 47k • updated 5.3 years ago by Parham • 1.4k
197
votes
12
answers
34k
views
36 follow
12
answers
Forum: Will Python Take The Place Of R?
R forum python biopython statistics written 6.7 years ago by Medhat ♦ 8.6k • updated 2.2 years ago by jared.andrews07 ♦ 4.8k
75
votes
2
answers
18k
views
36 follow
2
answers
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 3.9 years ago by Obi Griffith ♦ 18k • updated 18 months ago by avelarbio46 • 0
96
votes
21
answers
16k
views
34 follow
21
answers
Best Free Text Editor For All Popular Languages (R, Python, Perl Etc..)
perl R text python written 7.9 years ago by John • 1.5k • updated 2.4 years ago by grant.hovhannisyan • 1.9k
81
votes
8
answers
37k
views
34 follow
8
answers
Venn/Euler Diagram Of Four Or More Sets
R written 6.6 years ago by Hunter • 110 • updated 21 months ago by lequangminhtri • 30
91
votes
12
answers
22k
views
33 follow
12
answers
Is There Any R Or R / Bioconductor Package That Can Make Circular Plots Like Perl / Circos
R visualization written 8.0 years ago by John • 1.5k • updated 4.9 years ago by Mo • 920
40
votes
3
answers
127k
views
30 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 6.2 years ago by Arpitha Hebbar • 200 • updated 21 months ago by dexetra.in • 0
76
votes
0
answers
14k
views
30 follow
0
answers
Tutorial: Heatmaps in R
R tutorial heatmap written 3.5 years ago by Jean-Karim Heriche ♦ 21k
59
votes
4
answers
35k
views
28 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 8.9 years ago by Stephen ♦ 2.7k • updated 3.2 years ago by ShirleyDai • 40
46
votes
5
answers
19k
views
27 follow
5
answers
Retrieve All Genes Associated With A Go Term
R bioconductor go gene-ontology written 7.5 years ago by enricoferrero • 790 • updated 2.2 years ago by EagleEye ♦ 6.6k
39
votes
3
answers
7.3k
views
24 follow
3
answers
LD-decay in a r2 vs distance(cm) plot
R snp written 24 months ago by adele • 60 • updated 23 months ago by hewm2008 • 40
23
votes
3
answers
14k
views
23 follow
3
answers
Probability of gene list overlap
gene R overlap written 8.2 years ago by Nasir • 160 • updated 21 months ago by Biostar ♦♦ 20
19
votes
1
answer
4.0k
views
23 follow
1
answer
Difference between GO.db, biomaRt, and org.Hs.eg.db in GO annotations
R biomart go go.db written 2.2 years ago by lihaone • 90 • updated 4 weeks ago by Biostar ♦♦ 20
49
votes
1
answer
26k
views
20 follow
1
answer
Difference Between Mas5 And Rma Normalisation. Which Is More Appropriate When?
R microarray affymetrix data written 8.8 years ago by T. K. • 160 • updated 8.8 years ago by Neilfws ♦ 48k
60
votes
6
answers
51k
views
20 follow
6
answers
How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 8.3 years ago by Hamilton • 280 • updated 20 months ago by har-wradim • 20
30
votes
1
answer
8.7k
views
20 follow
1
answer
Volcano plot help code
R rna-seq written 22 months ago by anasofiamoreira94 • 70 • updated 20 months ago by jordi.planells • 90
19
votes
0
answers
2.1k
views
20 follow
0
answers
Tutorial: Showing up and down regulated GO and pathway using enrichR and ggplot2
R tutorial ggplot2 rna-seq written 16 months ago by ahmad mousavi • 470
34
votes
7
answers
27k
views
19 follow
7
answers
Pathway Analysis In R
pathway gene R written 8.3 years ago by Avoks • 140 • updated 2.9 years ago by theobroma22 • 1.1k
36
votes
6
answers
11k
views
19 follow
6
answers
Annotating Genomic Intervals
bedtools annotation bioconductor R written 7.4 years ago by Stephen ♦ 2.7k • updated 7.4 years ago by Alex Reynolds ♦ 29k
52
votes
0
answers
26k
views
19 follow
0
answers
Tutorial: Creating Interactive Volcano Plots with R and Plot.ly
R tutorial plotly volcano plot written 3.4 years ago by steve • 2.4k • updated 22 months ago by mail2steff • 50
39
votes
3
answers
14k
views
17 follow
3
answers
R: Topgo Usage Question
gene R bioconductor microarray written 9.5 years ago by Mike Dewar • 1.6k • updated 5.5 years ago by moonlughts • 0
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