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121
votes
1
answer
27k
views
113 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 3.2 years ago by Kevin Blighe ♦ 69k
140
votes
5
answers
25k
views
84 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 6.1 years ago by Parham • 1.5k • updated 4.3 years ago by hed.robin • 30
70
votes
0
answers
61k
views
74 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 7.2 years ago by Nicholas Spies • 1.1k • updated 2.4 years ago by _r_am ♦ 32k
64
votes
0
answers
8.7k
views
72 follow
0
answers
Tutorial: Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 2.6 years ago by egeulgen • 1.1k
145
votes
4
answers
157k
views
70 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 8.9 years ago by Obi Griffith ♦ 19k • updated 19 months ago by sansritisinha • 0
102
votes
9
answers
30k
views
70 follow
9
answers
How To Create Mutation Diagram In R Or In Any Tools?
domain R mutation written 8.0 years ago by henryvuong • 790 • updated 13 months ago by zx8754 ♦ 9.9k
50
votes
3
answers
12k
views
58 follow
3
answers
Tutorial: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Curve For Survival Analysis
R tutorial written 7.1 years ago by Nicholas Spies • 1.1k • updated 3.6 years ago by jmzeng1314 • 110
62
votes
2
answers
7.0k
views
47 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R ngs tool karyoploter written 3.6 years ago by bernatgel • 2.8k
79
votes
2
answers
21k
views
43 follow
2
answers
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 4.9 years ago by Obi Griffith ♦ 19k • updated 2.4 years ago by avelarbio46 • 10
55
votes
1
answer
6.8k
views
43 follow
1
answer
Tutorial: Parallel processing in R
R tutorial biocparallel mclapply foreach written 3.3 years ago by Kevin Blighe ♦ 69k
201
votes
12
answers
35k
views
38 follow
12
answers
Forum: Will Python Take The Place Of R?
R forum python biopython statistics written 7.7 years ago by Medhat ♦ 8.8k • updated 3.1 years ago by jared.andrews07 ♦ 8.3k
169
votes
17
answers
20k
views
36 follow
17
answers
Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
R bioconductor books written 10.8 years ago by Michael Dondrup ♦ 48k • updated 6.2 years ago by Parham • 1.5k
81
votes
0
answers
20k
views
36 follow
0
answers
Tutorial: Heatmaps in R
R tutorial heatmap written 4.5 years ago by Jean-Karim Heriche ♦ 24k
98
votes
21
answers
17k
views
34 follow
21
answers
Best Free Text Editor For All Popular Languages (R, Python, Perl Etc..)
perl R text python written 8.9 years ago by John • 1.5k • updated 3.4 years ago by grant.hovhannisyan • 2.0k
81
votes
8
answers
40k
views
34 follow
8
answers
Venn/Euler Diagram Of Four Or More Sets
R written 7.5 years ago by Hunter • 110 • updated 2.7 years ago by lequangminhtri • 30
91
votes
12
answers
24k
views
33 follow
12
answers
Is There Any R Or R / Bioconductor Package That Can Make Circular Plots Like Perl / Circos
R visualization written 8.9 years ago by John • 1.5k • updated 5.8 years ago by Mo • 920
42
votes
3
answers
152k
views
33 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 7.1 years ago by Arpitha Hebbar • 200 • updated 8 months ago by brianpenghe • 50
76
votes
3
answers
7.2k
views
31 follow
3
answers
Could you explain the difference between STAR, KALLISTO, SALMON etc. to experimental Biologist/non-bioinformatician
R next-gen alignment rna-seq assembly written 16 months ago by Wox • 420
59
votes
4
answers
37k
views
29 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 9.8 years ago by Stephen ♦ 2.7k • updated 7 months ago by Mahan • 70
49
votes
5
answers
22k
views
29 follow
5
answers
Retrieve All Genes Associated With A Go Term
R bioconductor go gene-ontology written 8.4 years ago by enricoferrero • 810 • updated 3.1 years ago by EagleEye ♦ 6.7k
41
votes
3
answers
11k
views
27 follow
3
answers
LD-decay in a r2 vs distance(cm) plot
R snp written 2.9 years ago by adele • 60 • updated 2.8 years ago by hewm2008 • 40
23
votes
3
answers
15k
views
23 follow
3
answers
Probability of gene list overlap
gene R overlap written 9.1 years ago by Nasir • 160 • updated 2.7 years ago by Biostar ♦♦ 20
26
votes
3
answers
42k
views
23 follow
3
answers
R: How to convert log2FC (Fold Change) obtained by limma's topTable() function to FC
R microarray toptable limma written 6.7 years ago by komal.rathi • 3.7k • updated 4.8 years ago by Biostar ♦♦ 20
20
votes
1
answer
5.7k
views
23 follow
1
answer
Difference between GO.db, biomaRt, and org.Hs.eg.db in GO annotations
R biomart go go.db written 3.1 years ago by lihaone • 100 • updated 12 months ago by Biostar ♦♦ 20
23
votes
0
answers
3.7k
views
21 follow
0
answers
Tool: pathfindR - Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 2.9 years ago by egeulgen • 1.1k
25
votes
1
answer
9.0k
views
21 follow
1
answer
Complex Heatmap: Changing order of clusters
R heatmap written 2.8 years ago by yomogy • 100 • updated 5 weeks ago by adR • 50
50
votes
1
answer
28k
views
20 follow
1
answer
Difference Between Mas5 And Rma Normalisation. Which Is More Appropriate When?
R microarray affymetrix data written 9.7 years ago by T. K. • 160 • updated 9.7 years ago by Neilfws ♦ 49k
67
votes
6
answers
59k
views
20 follow
6
answers
How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 9.2 years ago by Hamilton • 280 • updated 2.6 years ago by har-wradim • 40
52
votes
0
answers
31k
views
20 follow
0
answers
Tutorial: Creating Interactive Volcano Plots with R and Plot.ly
R tutorial plotly volcano plot written 4.3 years ago by steve • 2.7k • updated 3 months ago by jg43486 • 0
30
votes
1
answer
12k
views
20 follow
1
answer
Volcano plot help code
R rna-seq written 2.8 years ago by anasofiamoreira94 • 70 • updated 2.6 years ago by jordi.planells • 330
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