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101
votes
1
answer
15k
views
83 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 22 months ago by Kevin Blighe ♦ 48k
137
votes
5
answers
20k
views
82 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 4.8 years ago by Parham • 1.4k • updated 3.0 years ago by hed.robin • 30
66
votes
0
answers
54k
views
70 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 5.8 years ago by Nicholas Spies • 1.1k • updated 12 months ago by RamRS ♦ 24k
142
votes
4
answers
143k
views
68 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 7.5 years ago by Obi Griffith ♦ 18k • updated 12 weeks ago by sansritisinha • 0
99
votes
8
answers
27k
views
68 follow
8
answers
How To Create Mutation Diagram In R Or In Any Tools?
domain R mutation written 6.7 years ago by henryvuong • 760 • updated 7 months ago by WouterDeCoster ♦ 40k
55
votes
0
answers
4.3k
views
62 follow
0
answers
Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 15 months ago by egeulgen • 820
48
votes
3
answers
11k
views
56 follow
3
answers
Tutorial: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Curve For Survival Analysis
R tutorial written 5.8 years ago by Nicholas Spies • 1.1k • updated 2.3 years ago by jmzeng1314 • 90
60
votes
2
answers
5.0k
views
47 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R ngs tool karyoploter written 2.3 years ago by bernatgel • 2.0k
168
votes
17
answers
18k
views
36 follow
17
answers
Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
R bioconductor books written 9.5 years ago by Michael Dondrup ♦ 46k • updated 4.9 years ago by Parham • 1.4k
197
votes
12
answers
34k
views
36 follow
12
answers
Forum: Will Python Take The Place Of R?
R forum python biopython statistics written 6.3 years ago by Medhat ♦ 8.4k • updated 22 months ago by jared.andrews07 • 3.1k
75
votes
2
answers
17k
views
36 follow
2
answers
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 3.5 years ago by Obi Griffith ♦ 18k • updated 13 months ago by avelarbio46 • 0
96
votes
21
answers
15k
views
34 follow
21
answers
Best Free Text Editor For All Popular Languages (R, Python, Perl Etc..)
perl R text python written 7.5 years ago by John • 1.5k • updated 2.0 years ago by grant.hovhannisyan • 1.7k
81
votes
8
answers
36k
views
34 follow
8
answers
Venn/Euler Diagram Of Four Or More Sets
R written 6.2 years ago by Hunter • 110 • updated 16 months ago by lequangminhtri • 30
91
votes
12
answers
22k
views
33 follow
12
answers
Is There Any R Or R / Bioconductor Package That Can Make Circular Plots Like Perl / Circos
R visualization written 7.6 years ago by John • 1.5k • updated 4.5 years ago by Mo • 890
43
votes
1
answer
3.6k
views
33 follow
1
answer
Tutorial: Parallel processing in R
R tutorial biocparallel mclapply foreach written 2.0 years ago by Kevin Blighe ♦ 48k
74
votes
0
answers
11k
views
32 follow
0
answers
Tutorial: Heatmaps in R
R tutorial heatmap written 3.1 years ago by Jean-Karim Heriche ♦ 20k
39
votes
3
answers
112k
views
29 follow
3
answers
How To Update R In Ubuntu ?
R ubuntu written 5.8 years ago by Arpitha Hebbar • 200 • updated 16 months ago by dexetra.in • 0
59
votes
4
answers
34k
views
28 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 8.5 years ago by Stephen ♦ 2.7k • updated 2.8 years ago by ShirleyDai • 40
45
votes
5
answers
18k
views
25 follow
5
answers
Retrieve All Genes Associated With A Go Term
R bioconductor go gene-ontology written 7.1 years ago by enricoferrero • 770 • updated 21 months ago by EagleEye ♦ 6.5k
23
votes
3
answers
13k
views
23 follow
3
answers
Probability of gene list overlap
gene R overlap written 7.8 years ago by Nasir • 160 • updated 16 months ago by Biostar ♦♦ 20
49
votes
1
answer
25k
views
20 follow
1
answer
Difference Between Mas5 And Rma Normalisation. Which Is More Appropriate When?
R microarray affymetrix data written 8.4 years ago by T. K. • 160 • updated 8.4 years ago by Neilfws ♦ 48k
55
votes
6
answers
48k
views
20 follow
6
answers
How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Sequences In A Single File
fasta next-gen sequencing perl R rna written 7.9 years ago by Hamilton • 260 • updated 15 months ago by har-wradim • 20
31
votes
1
answer
6.5k
views
20 follow
1
answer
Volcano plot help code
R rna-seq written 17 months ago by anasofiamoreira94 • 40 • updated 15 months ago by jordi.planells • 90
19
votes
0
answers
1.6k
views
20 follow
0
answers
Tutorial: Showing up and down regulated GO and pathway using enrichR and ggplot2
R tutorial ggplot2 rna-seq written 11 months ago by ahmad mousavi • 450
34
votes
7
answers
27k
views
19 follow
7
answers
Pathway Analysis In R
pathway gene R written 7.8 years ago by Avoks • 140 • updated 2.5 years ago by theobroma22 • 1.1k
15
votes
1
answer
3.1k
views
19 follow
1
answer
Difference between GO.db, biomaRt, and org.Hs.eg.db in GO annotations
R biomart go go.db written 21 months ago by lihaone • 70 • updated 12 months ago by Dunja • 10
30
votes
3
answers
5.7k
views
19 follow
3
answers
LD-decay in a r2 vs distance(cm) plot
R snp written 19 months ago by adele • 40 • updated 18 months ago by hewm2008 • 20
39
votes
3
answers
14k
views
17 follow
3
answers
R: Topgo Usage Question
gene R bioconductor microarray written 9.1 years ago by Mike Dewar • 1.5k • updated 5.1 years ago by moonlughts • 0
35
votes
6
answers
11k
views
17 follow
6
answers
Annotating Genomic Intervals
bedtools annotation bioconductor R written 7.0 years ago by Stephen ♦ 2.7k • updated 7.0 years ago by Alex Reynolds ♦ 28k
51
votes
0
answers
23k
views
17 follow
0
answers
Tutorial: Creating Interactive Volcano Plots with R and Plot.ly
R tutorial plotly volcano plot written 3.0 years ago by steve • 2.3k • updated 17 months ago by mail2steff • 50
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