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Plotting GO annotation with R
R rna-seq written 2 hours ago by Cordyline • 0
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45
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Error in example RNA-Seq Example
R deseq rna-seq handbook written 3 hours ago by lextallan • 10
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Remove Probes from Raw .CEL Files - AFFY HG-U133-Plus2.0
R rna-seq written 3.4 years ago by Alex Gibbs • 40 • updated 14 hours ago by Biostar ♦♦ 20
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80
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BAM Header for ATAC-seq
R bam atac-seq written 25 days ago by sophia.dingg • 0 • updated 1 day ago by Biostar ♦♦ 20
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45
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Why doesn't TCGA .rsem.isoforms.results have a length column?
R tcga rna-seq rsem alternative splicing written 3 days ago by majd.abdulghani • 10
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SNPRelate Error in LD pruning
R written 1 day ago by evelyn • 90
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48
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R package 'survival' version problem
R written 2 days ago by cromero • 0
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101
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Loop to retrieve rsID out of chrID list
genome R biomart snp written 8 days ago by aroso491 • 0 • updated 2 days ago by Mike Smith • 1.5k
2
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2
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67
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2
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lift over gene ids rat to human
R biomart rna-seq written 5 days ago by sim.j.baum • 50 • updated 2 days ago by Mike Smith • 1.5k
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Job: Postdoctoral Researcher in Cancer Biology and Genomics (Boston)
genomics cancer job spatial R single-cell written 2 days ago by rubendries • 10
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Coloring cluster by cell type and parient id
R rna-seq umap written 2 days ago by no • 0
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1
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53
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1
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What does minoverlap = 1L means?
gene R annotatr written 3 days ago by rohitsatyam102 • 110 • updated 3 days ago by ATpoint ♦ 36k
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118
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Interaction Factors Removing All Variability
R deseq2 deseq rna-seq written 8 weeks ago by tyak9569 • 0 • updated 3 days ago by antonioggsousa • 270
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[R] Issue for reading .cel file (affy, affyio, oligo, affxparser)
R affy cel written 3 days ago by GH_fr • 0 • updated 3 days ago by RamRS ♦ 27k
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76
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PureCN prepare environment error
software error R purecn written 4 days ago by cg_ref_database • 10 • updated 3 days ago by markus.riester • 490
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how to get distance of each SNPs to the transcripts' 5'UTR and 3'UTR?
genome R sequence snp sequencing written 10 weeks ago by mikysyc2016 • 70 • updated 3 days ago by Biostar ♦♦ 20
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1
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77
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1
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Pathways Analysis in R
pathways deg R written 3 days ago by GiuliaAC • 0 • updated 3 days ago by volidif659 • 0
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1
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55
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1
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How to process raw data (.cel files) from GEO and get annotation of genes
R rna-seq python written 3 days ago by ZENO3175 • 0 • updated 3 days ago by thind.amarinder • 20
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comparison among the accumulation density curves
software error R written 3 days ago by qicaibiology • 70
1
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1
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58
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1
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stacked barplot color choice
R metagenomics 16s phyloseq written 4 days ago by DC7 • 20 • updated 3 days ago by antonioggsousa • 270
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55
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1
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classifying samples by TCGA signature
R rna-seq written 4 days ago by garrettbullivant • 0 • updated 4 days ago by Kevin Blighe ♦ 61k
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Job: Fully Funded PhD Position in the interface of Machine Learning and Health Informatics (including Bioinformatics and Clinical Informatics) - Fall 2020
gene genome job snp R written 4 days ago by suzanarslanturk • 0
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How can you use normalised count matrix for differential gene expression analysis?
gene R rna-seq written 4 days ago by bigitharulesforever • 0 • updated 4 days ago by Kevin Blighe ♦ 61k
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83
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How can Differentially Expressed Genes be found by limma package after removing batch effect by ComBat function in sva package?
R sva limma batch effect written 4 days ago by amirmehrgou • 0 • updated 4 days ago by RamRS ♦ 27k
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5 follow
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ChIP-seq analysis guidance for a beginner
R protein enrichment chip-seq python written 5 days ago by DM95 • 0 • updated 5 days ago by jared.andrews07 ♦ 6.1k
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How to use the result of ConsensusClusterPlus in pheatmap to draw a heat map
R consensusclusterplus written 5 days ago by daillythings_zhou • 0
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100
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pheatmap: Error in hclust(d, method = method) : NA/NaN/Inf in foreign function call (arg 10)
R pheatmap rna-seq arg10 written 5 days ago by camillab. • 10
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20 follow
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Tool: pathfindR - Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 2.3 years ago by egeulgen • 980 • updated 5 days ago by manojkamalanathan711 • 0
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61
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Significance testing on regression with binned data
R written 6 days ago by selplat21 • 10
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90
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sc-ATAC pro downstream analysis in R
gene R chip-seq sequencing written 17 days ago by sidrah.maryam • 0 • updated 6 days ago by Biostar ♦♦ 20
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