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type='apeglm' shrinkage only for use with 'coef'
R rna-seq written 2 hours ago by wuyingncu0 • updated 22 minutes ago by genomax85k
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DESeq2 design with three treatments and the genes common to all
desq2 R rna-seq written 3 days ago by MaxF50 • updated 21 hours ago by Kevin Blighe61k
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PureCN prepare environment error
software error R purecn written 10 days ago by cg_ref_database10 • updated 1 day ago by markus.riester490
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RStudio Pheatmap: sort DEG by logFC
R rna-seq written 2 days ago by chienjen1130 • updated 1 day ago by caggtaagtat1.1k
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perplexity value in t-sne algorithm
gene R rna-seq t-sne written 2.7 years ago by einatshu0 • updated 2 days ago by Renesh1.9k
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Obtaining gene expression data from GEO
geo R microarray written 2 days ago by silsie64510 • updated 2 days ago by patelk26120
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Convert Logp value to P value
R csv P snp logp written 2 days ago by devarora150 • updated 2 days ago by RamRS27k
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plotP from SPIA
R rna-seq written 2 days ago by bojkem910
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Grouping gene names programmatically
gene R written 2 days ago by hakon.kaspersen0 • updated 2 days ago by antonioggsousa480
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Problem in LD-based SNP pruning using SNPRelate
R snp snprelate written 3 days ago by evelyn100 • updated 3 days ago by zx87549.4k
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Pairwise wilcox test error
R written 3 days ago by celia.escher10 • updated 3 days ago by antonioggsousa480
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Ensembl ID mapping using Biomart
software error R rna-seq gene written 4 days ago by prithvi.mastermind0 • updated 4 days ago by Jean-Karim Heriche22k
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enhanced volcano plot
R enhancedvolcano rna-seq written 4 days ago by javanokendo0 • updated 4 days ago by zx87549.4k
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Counting single-cell ATAC fragments at peaks on BED file
R atac-seq written 4 days ago by Nico0 • updated 4 days ago by geek_y11k
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Tool to merge two GTFs
gtf R written 4 days ago by manninm0
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Spaces in chromosomes when plotting Manhattan plots
R manhattan qqman written 4 days ago by lamia_20370 • updated 4 days ago by i.sudbery8.2k
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