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<prev • 124 results • page 1 of 5 • next >
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How to find list of significant genes (hyper and hypomethylated) in minfi after running bumphunter
R written 11 hours ago by sinha.puja • 10
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62 follow
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Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 15 months ago by egeulgen • 820
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Population Genetics from SNP data- no VCF
R snp population genetics written 17 days ago by vidyavuru • 0 • updated 1 day ago by Biostar ♦♦ 20
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5 follow
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How to add significant cut off in manhattan plot
R written 4 days ago by Manoj • 30 • updated 1 day ago by ATpoint ♦ 23k
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Processing GEO data and calculating differential expression using limma
geo R beadarray limma differential expression written 1 day ago by APJ • 20
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Merge two columns dataframes
gene R written 1 day ago by samira.reuscher • 0 • updated 1 day ago by zx8754 ♦ 8.2k
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6 follow
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Atypical Volcano plot of RNAseq data
R rna-seq written 4 days ago by saamar.rajput • 50
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Chip-seeker heatmap around the peak centers
R chipseeker written 5 weeks ago by Jingyue • 30 • updated 1 day ago by zx8754 ♦ 8.2k
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Downstream proportions are not identical in vennpie and upsetplot results
R upsetplot chipseeker written 14 months ago by afli • 190 • updated 1 day ago by zx8754 ♦ 8.2k
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May I use NB.MClust package for RNASeq genes clustering instead of samples clustering?
R rna-seq nb.mclust written 27 days ago by J. Smith • 0 • updated 1 day ago by qian.li10000 • 0
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binomtest In R
R rna-seq written 2 days ago by qicaibiology • 20
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*.rnk file preparation for GSEA analysis
R rna-seq webgestalt enrichment analysis gsea written 2 days ago by o.mikh90 • 10
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goseq analysis with only geneid or genesymbol
R rna-seq written 2.2 years ago by novicebioinforesearcher • 50 • updated 3 days ago by Biostar ♦♦ 20
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Calculate p-value for experiment group with replicates, while control group without replicates
R deseq2 rna-seq edger written 3 days ago by zhangdengwei • 40 • updated 3 days ago by Nicolas Rosewick ♦ 8.1k
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Graphic outputs using GAPIT
R gapit gwas written 4 days ago by baaliou52 • 0 • updated 3 days ago by zx8754 ♦ 8.2k
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104
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Mapping Entrez gene ids to Ensembl ids
gene R biomart entrez ensembl written 5 days ago by Natasha • 30 • updated 4 days ago by Mike Smith • 1.4k
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Dealing with rRNA reads in differential expression analysis
R deseq2 salmon rna-seq written 4 days ago by msbio • 0
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edgeR dispersion value (common BCV (square- root-dispersion)) when no replicates in dataset
software error R next-gen rna-seq genome written 4 days ago by fatimarasool135 • 40
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RColorBrewer for annotations in ComplexHeatmap
R rna-seq complexheatmap written 6 days ago by fmarchildo • 20 • updated 4 days ago by zx8754 ♦ 8.2k
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5 follow
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Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 23 months ago by Cyriac Kandoth ♦ 5.3k
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Coding vs Noncoding Genes in Hit List
gene R high throughput written 14 days ago by Scott McKay • 10 • updated 5 days ago by Biostar ♦♦ 20
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Is this the right way to condense defined list of genes into one row in heatmap?
R rna-seq written 5 days ago by persimmon • 20
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BEAST has terminated with an error (Can anybody guide me?)
R next-gen sequencing written 5 days ago by abdulahad.laiq • 0 • updated 5 days ago by genomax ♦ 71k
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Microarray Probes to Ensembl ID or Gene ID - clariomdhumanprobeset.db
gene R probe microarray python written 7 days ago by Scott McKay • 10 • updated 5 days ago by Kevin Blighe ♦ 48k
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power analysis for gene burden test
power burden R written 5 days ago by monaallouba • 0
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Getting a list of protein coding genes in human
gene R rna-seq written 5 days ago by Angel • 3.5k
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90
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Is it necessary to do FastQC before using RSEM?
R alignment rna-seq written 6 days ago by Jon • 110 • updated 6 days ago by genomax ♦ 71k
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112
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Difference between log and ln in bioinformatic
software error R written 7 days ago by Movahhed • 0
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427
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7 follow
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Tools for scRNAseq
genome R rna-seq written 13 months ago by wenbinm • 10 • updated 7 days ago by alireza.khodadadi.j • 30
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Seurat integrated analysis with replicates
R single cell dropseq rna-seq written 7 days ago by from the mountains • 70 • updated 7 days ago by jared.andrews07 • 3.1k
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