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110
votes
1
answer
22k
views
95 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 2.6 years ago by Kevin Blighe ♦ 61k
138
votes
5
answers
24k
views
82 follow
5
answers
Tutorial: A few words for R beginners
R beginner swirl tutorial written 5.6 years ago by Parham • 1.5k • updated 3.8 years ago by hed.robin • 30
68
votes
0
answers
59k
views
72 follow
0
answers
Tutorial: Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
R tutorial classification cancer written 6.6 years ago by Nicholas Spies • 1.1k • updated 22 months ago by RamRS ♦ 27k
76
votes
2
answers
19k
views
39 follow
2
answers
Tutorial: How to create a mutation landscape (waterfall) plot with GenVisR
R bioconductor graphics tutorial genvisr written 4.3 years ago by Obi Griffith ♦ 18k • updated 23 months ago by avelarbio46 • 0
62
votes
2
answers
6.3k
views
47 follow
2
answers
Tool: karyoploteR: uncircle your genomes
dataviz R ngs tool karyoploter written 3.1 years ago by bernatgel • 2.6k
58
votes
0
answers
7.1k
views
66 follow
0
answers
Tutorial: Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 2.1 years ago by egeulgen • 980
76
votes
0
answers
16k
views
30 follow
0
answers
Tutorial: Heatmaps in R
R tutorial heatmap written 3.9 years ago by Jean-Karim Heriche ♦ 22k
145
votes
4
answers
152k
views
70 follow
4
answers
How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
R heatmap written 8.4 years ago by Obi Griffith ♦ 18k • updated 12 months ago by sansritisinha • 0
50
votes
3
answers
12k
views
58 follow
3
answers
Tutorial: Machine Learning For Cancer Classification - Part 4 - Plotting A Kaplan-Meier Curve For Survival Analysis
R tutorial written 6.6 years ago by Nicholas Spies • 1.1k • updated 3.1 years ago by jmzeng1314 • 90
169
votes
17
answers
19k
views
36 follow
17
answers
Recommend Your Favorite Introductory "R In Bioinformatics" Books And Resources
R bioconductor books written 10.3 years ago by Michael Dondrup ♦ 47k • updated 5.7 years ago by Parham • 1.5k
101
votes
9
answers
29k
views
69 follow
9
answers
How To Create Mutation Diagram In R Or In Any Tools?
domain R mutation written 7.5 years ago by henryvuong • 780 • updated 7 months ago by zx8754 ♦ 9.4k
52
votes
0
answers
28k
views
19 follow
0
answers
Tutorial: Creating Interactive Volcano Plots with R and Plot.ly
R tutorial plotly volcano plot written 3.8 years ago by steve • 2.6k • updated 2.3 years ago by mail2steff • 60
54
votes
1
answer
5.8k
views
43 follow
1
answer
Tutorial: Parallel processing in R
R tutorial biocparallel mclapply foreach written 2.8 years ago by Kevin Blighe ♦ 61k
91
votes
12
answers
23k
views
33 follow
12
answers
Is There Any R Or R / Bioconductor Package That Can Make Circular Plots Like Perl / Circos
R visualization written 8.4 years ago by John • 1.5k • updated 5.3 years ago by Mo • 920
33
votes
2
answers
13k
views
2
answers
Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 3.8 years ago by martinguerrerog89 • 300 • updated 16 months ago by david.peeney • 30
59
votes
4
answers
36k
views
29 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 9.3 years ago by Stephen ♦ 2.7k • updated 23 days ago by Mahantesh Biradar • 30
20
votes
0
answers
4.1k
views
19 follow
0
answers
Tutorial: Creating a karyotype plot with genes using karyoploteR
genome R tutorial visualization karyoploter written 2.6 years ago by bernatgel • 2.6k • updated 2.0 years ago by aadilkhan9409 • 0
19
votes
0
answers
2.7k
views
20 follow
0
answers
Tutorial: Showing up and down regulated GO and pathway using enrichR and ggplot2
R tutorial ggplot2 rna-seq written 21 months ago by ahmad mousavi • 480
39
votes
3
answers
59k
views
17 follow
3
answers
Clustering Data (Rna-Seq) Using R To Produce A Heatmap
gene R rna clustering heatmap written 8.7 years ago by Kanne • 430 • updated 5.3 years ago by Bohdan Khomtchouk • 320
28
votes
1
answer
9.2k
views
17 follow
1
answer
Tutorial: Creating chromosome karyotype plot with R and ggplot2
R karyotype ggplot2 tutorial chromosome written 2.9 years ago by steve • 2.6k • updated 2.6 years ago by bernatgel • 2.6k
36
votes
2
answers
14k
views
2
answers
How Do I Import Rdf Data Into R?
R web written 9.9 years ago by Egon Willighagen ♦ 5.2k • updated 2.8 years ago by Biostar ♦♦ 20
48
votes
5
answers
20k
views
28 follow
5
answers
Retrieve All Genes Associated With A Go Term
R bioconductor go gene-ontology written 7.9 years ago by enricoferrero • 800 • updated 2.6 years ago by EagleEye ♦ 6.6k
197
votes
12
answers
34k
views
36 follow
12
answers
Forum: Will Python Take The Place Of R?
R forum python biopython statistics written 7.1 years ago by Medhat ♦ 8.7k • updated 2.6 years ago by jared.andrews07 ♦ 6.2k
16
votes
1
answer
9.5k
views
1
answer
Tutorial: retrieve full TCGA datasets from cBioportal with R
data_retrieval tutorial tcga R cbioportal rnaseq written 3.7 years ago by TriS • 4.2k • updated 13 months ago by raffael.azevedo • 30
16
votes
0
answers
4.8k
views
5 follow
0
answers
Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 2.8 years ago by Cyriac Kandoth ♦ 5.5k
23
votes
0
answers
3.0k
views
20 follow
0
answers
Tool: pathfindR - Enrichment Analysis using Active Subnetworks
pathway R active subnetwork tool enrichment written 2.3 years ago by egeulgen • 980 • updated 12 days ago by manojkamalanathan711 • 0
23
votes
3
answers
14k
views
23 follow
3
answers
Probability of gene list overlap
gene R overlap written 8.6 years ago by Nasir • 160 • updated 2.2 years ago by Biostar ♦♦ 20
17
votes
0
answers
8.1k
views
0
answers
Tool: ggrepel: repel overlapping text labels in ggplot2
R tools visualization written 4.5 years ago by Kamil • 2.0k • updated 20 months ago by RamRS ♦ 27k
15
votes
0
answers
9.5k
views
0
answers
Tutorial: How to create a mutation lolliplot with GenVisR
graphics bioconductor tutorial R genvisr written 4.1 years ago by Obi Griffith ♦ 18k • updated 3.9 years ago by mia1260 • 0
50
votes
1
answer
27k
views
20 follow
1
answer
Difference Between Mas5 And Rma Normalisation. Which Is More Appropriate When?
R microarray affymetrix data written 9.2 years ago by T. K. • 160 • updated 9.2 years ago by Neilfws ♦ 48k
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