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<prev • 4,140 results • page 1 of 138 • next >
0
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How do I get .traw output using .bed .bim and .fam files in PLINK?
plink snp written 1 day ago by defenestr8r • 0
2
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1
answer
74
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1
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Duplication Mutation prediction
genome snp written 3 days ago by yoosefyud • 0 • updated 2 days ago by Kevin Blighe ♦ 21k
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46
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Generating random sets of LD-independent SNPs from GWAS and calculating an empirical p-value
snp permutation testing empirical p-value r2 ld written 3 days ago by AB • 0
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82
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News: Introduction to Linux workflows for biologists (IBUL03)
news next-gen rna-seq snp written 3 days ago by oliverhooker • 40
1
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1
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755
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5 follow
1
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Variant Effect Predictor parameters for custom gff and fasta
fasta gff vep snp written 17 months ago by R.Blues • 80 • updated 3 days ago by nicolas.dussex • 30
2
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1
answer
885
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1
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Haplogroup Prediction
snp sequencing written 4.3 years ago by Arturo_M • 70 • updated 3 days ago by Shicheng Guo • 4.9k
1
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121
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0
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GT (genotype information) in haploid organism has a value of 2 .
genotype snp written 9 weeks ago by shubhra.bhattacharya • 40 • updated 3 days ago by Biostar ♦♦ 20
0
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1
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55
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1
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How to perform eQTL study if i have small sample size?
gwas eqtl snp rna-seq written 3 days ago by akilabioinfo • 0 • updated 3 days ago by maxime.policarpo • 20
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53
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VCFtools pop_missing_filter.sh not working
vcf assembly snp written 6 days ago by M • 0 • updated 3 days ago by finswimmer ♦ 2.7k
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1
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46
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1
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Can DiscoSNP++ deal with hybrid input of both paired-end and single-end reads?
discosnp++ variant calling snp discosnp written 5 days ago by emeline.a.favreau • 0 • updated 4 days ago by pierre.peterlongo • 760
3
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0
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87
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bwa mem -T (alignment score) not doing anything
genome sequence snp written 4 days ago by chris.bird • 0
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0
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66
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0
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Inferring Ploidy or Copy Number from Allele Balance?
genome snp sequencing written 4 days ago by chris.bird • 0
1
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73
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0
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Mutation position on sequencing read length
next-gen alignment snp sequencing written 4 days ago by rahulk.aiims • 0
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1
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53
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1
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Liftover dbSNP IDs
assembly snp written 4 days ago by Arko • 10 • updated 4 days ago by Pierre Lindenbaum ♦ 108k
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228
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6 follow
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filling of missing genotype information in merged variant call vcf file
snp written 10 days ago by princy149 • 20
0
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0
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36
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0
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What is the distribution of coalescent time like?
gene coalescent coalescent time snp written 4 days ago by jinzheng9406 • 0
0
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1
answer
100
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1
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kissDE diffExpressedVariants Error in nls
rna-seq snp kissplice written 12 days ago by ovidiu • 0
1
vote
1
answer
72
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1
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Fill a VCF record field that is partially annotated
vcf vcfanno gnomad snp written 4 days ago by joangibert14 • 0 • updated 4 days ago by Pierre Lindenbaum ♦ 108k
3
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1
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106
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1
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SNPs based on cDNA sequence could be artifacts of RNA editing
rna snp written 5 days ago by salvatore.digiorgio • 10 • updated 5 days ago by Kevin Blighe ♦ 21k
0
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0
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63
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0
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Different output files from "Shapeit -check"
shapeit snp imputation strand alignment phasing written 5 days ago by lattes666 • 0
2
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1
answer
105
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1
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BQSR vs VQSR
gatk snp written 5 days ago by James Reeve • 10 • updated 5 days ago by finswimmer ♦ 2.7k
0
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1
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101
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1
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Checking steps to analyze snp-array data for variants detection
snp-array snp written 9 days ago by Sharon • 320
4
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1
answer
82
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1
answer
PCA and statistics on SNPmatrix
pca snp written 5 days ago by dominicdhall • 40 • updated 5 days ago by leeandroid • 80
0
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0
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41
views
0
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News: RADseq data analsyis Workshop. LAST 2 spots available
news next-gen radseq snp written 5 days ago by carlopecoraro2 • 670
0
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0
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104
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0
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Filter SNPs based on more than one segregation pattern (1:1 and 1:2:1)
snp written 5 weeks ago by gaurab.bhattarai46 • 0 • updated 6 days ago by Biostar ♦♦ 20
1
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1
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108
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1
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plot genome using RCircos
genome R snp assembly written 7 days ago by hbdhondge • 0 • updated 6 days ago by bernatgel • 1.2k
2
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4
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3.3k
views
4
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Converting list of Affy SNP ids to dbSNP rs ids
rs snp affymetrix written 3.1 years ago by devenvyas • 480 • updated 7 days ago by josmell.sevillano.o • 0
0
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0
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275
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concordance rate between SNP observed and SNP not observed
snp written 7 weeks ago by nour.hadjz • 0 • updated 7 days ago by Biostar ♦♦ 20
0
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1
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143
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1
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Disease/Trait SNPs Enrichment Analysis
snp sequencing written 8 weeks ago by tahseen.abbas • 0 • updated 8 days ago by geek_y ♦ 8.6k
1
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How to calculate effect(beta) and SE from z-score and p-value?
R snp written 9 days ago by anthouliouslive • 10 • updated 9 days ago by Biostar ♦♦ 20
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