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<prev • 4,751 results • page 1 of 159 • next >
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Many 0 in ped file converted from vcf genomic data
vcf gwas plink snp written 1 day ago by shawn • 20 • updated 4 hours ago by zx8754 ♦ 6.5k
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1
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65
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1
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iClusterPlus heatmap labeling samples and genes
R snp rna-seq written 14 hours ago by d88020 • 10 • updated 7 hours ago by Buffo • 1.2k
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40
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XPEHH output file blank in SELSCAN
snp written 14 hours ago by azizul • 0
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0
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194
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Allele frequency visualization
R stacks vcftools snp written 9 weeks ago by jaafari.omid • 10 • updated 2 days ago by Biostar ♦♦ 20
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132
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VCF file filtration
vcf wgs bcftools vcftools snp written 2 days ago by jaafari.omid • 10
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181
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plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR values)
analysis association plink snp written 14 days ago by kushagraprasad24 • 0
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49
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how to convert ped format to hapmap
snp written 3 days ago by shawn • 20
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0
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83
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0
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1001 Arabidopsis SNP
vcf plink snp written 3 days ago by shawn • 20 • updated 3 days ago by zx8754 ♦ 6.5k
1
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62
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Why MAF file number not match with case number in firebrowse?
genome next-gen snp written 3 days ago by shoujun.gu • 360
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1
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3.9k
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1
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Search dbSNP for hg19 based coordinates
dbsnp snp written 2.8 years ago by curious • 40 • updated 4 days ago by Shicheng Guo • 7.4k
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2
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83
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2
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Insert mutations in a reference genome from a vcf
simulation snp sequencing written 4 days ago by IP • 530 • updated 4 days ago by WouterDeCoster ♦ 36k
10
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3
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5.5k
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8 follow
3
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MutSigCV output and coMut plots
variants comut plot snp mutsigcv written 4.5 years ago by A. Domingues • 1.8k • updated 4 days ago by jana • 10
2
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0
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75
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Population Private SNPs
next-gen snp written 5 days ago by ThePlaintiff • 10
1
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1
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193
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1
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VCFTools - Writing 012 matrix files ... Error: Could not open temporary file.
snp written 11 weeks ago by jmounger • 0 • updated 5 days ago by epipar • 0
3
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1
answer
63
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1
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dbsnp for capra hircus
indels snp variants written 5 days ago by Mbillah • 110
12
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3
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192
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7 follow
3
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Fast way to return genomic regions for 10,000 SNPs in rsID
bed rsid snp written 6 days ago by Shicheng Guo • 7.4k
13
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2
answers
1.3k
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7 follow
2
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How to predict individual ethnicity information by using hapmap data
hapmap ethnicity snp written 11 months ago by Joe • 10 • updated 5 days ago by marco • 0
1
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1
answer
81
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1
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Converting genotypes to allele frequencies
genome R snp written 6 days ago by 110300553 • 0 • updated 6 days ago by JC ♦ 7.4k
1
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0
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86
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0
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Difference between Private SNPs and Singleton SNPs
variant calling gatk snps snp population genetics written 6 days ago by prasundutta87 • 310
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1
answer
105
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1
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How to count variant occurrences in .vcf
.vcf ngs variant occurance snp written 6 days ago by darceyc17 • 0 • updated 6 days ago by colindaven • 1.0k
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88
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calculating distances between DNA markers
snp bash written 6 days ago by milton.andy • 10 • updated 6 days ago by finswimmer ♦ 9.9k
1
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1
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84
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1
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RNA-SEQ SNP calling
indel variant snp rna-seq written 6 days ago by babji2318 • 0 • updated 6 days ago by JC ♦ 7.4k
7
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3
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89
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3
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Random SNPs simulation?
snp written 7 days ago by thomasbersez • 10 • updated 7 days ago by rainadawan • 10
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0
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73
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0
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SNP calling in Identical exons of two different genes
genome homolog alignment snp identical exon written 7 days ago by Sudhir Jadhao • 60
2
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0
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127
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0
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Too many distinct mutations in matched normal and cancer cells
vcf exome snp cancer written 8 days ago by prashant10991 • 0
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65
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0
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Correct way to report variant statistics from bcftools stats report
bcftools snp variants statistics written 8 days ago by prasundutta87 • 310
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1
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93
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1
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PLINK --r2 square: snp ids are not written
snp plink ld r2 written 8 days ago by Hamid • 10 • updated 8 days ago by chrchang523 ♦ 4.6k
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85
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Estimate heritability of a trait (single number)
genome snp written 9 days ago by rednalf • 20
2
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0
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80
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0
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How can I get the information p or q-arm in chromosome based on dbSNP or others?
snp written 10 days ago by sjunlee89 • 0
2
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2
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110
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2
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Calculate average parental genotype
gwas snp written 10 days ago by coleman_jonathan • 410 • updated 10 days ago by finswimmer ♦ 9.9k
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